BLASTX nr result

ID: Panax21_contig00000323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000323
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange f...    72   3e-10

>ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera] gi|297744497|emb|CBI37759.3| unnamed protein
           product [Vitis vinifera]
          Length = 587

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
 Frame = +1

Query: 1   LSADVXXXXXXXXXXYRRFDAEG------SSPLARRGLIAISCWSFLPPLMLPVIGGKDV 162
           LSADV           RR+D EG      SSPLA R ++  S +   PPLMLPVIGG+DV
Sbjct: 22  LSADVSESESCSSFSCRRYDGEGASSSMTSSPLACRPVVGNSSFPVGPPLMLPVIGGRDV 81

Query: 163 VVWEEKPQKSETDFSGSRELK 225
           VVW EKP+K ETD S +  +K
Sbjct: 82  VVWGEKPEKRETDLSEAEMMK 102


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