BLASTX nr result

ID: Panax21_contig00000322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000322
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34676.3| unnamed protein product [Vitis vinifera]              262   6e-68
ref|XP_002269986.1| PREDICTED: putative Holliday junction resolv...   262   6e-68
ref|XP_002298037.1| predicted protein [Populus trichocarpa] gi|2...   251   1e-64
gb|ADL36700.1| GRF domain class transcription factor [Malus x do...   247   2e-63
ref|XP_004143911.1| PREDICTED: putative Holliday junction resolv...   243   3e-62

>emb|CBI34676.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  262 bits (670), Expect = 6e-68
 Identities = 129/169 (76%), Positives = 148/169 (87%)
 Frame = -3

Query: 802 MKYMKPLNLFQNLLKSNALERGRLLGLDVGDKYVGLAVSDFQNQIASPLSVLHRKKTNID 623
           MKY+KP+NLF +LLK  A ERGRLLGLDVGDKYVGLAVSD  N+IASPLSVL RKK+NID
Sbjct: 56  MKYVKPVNLFHDLLKMKATERGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNID 115

Query: 622 LMATDFQTLISELSLSGFIFGYPFTRLRSSPDAIQVKILIEDLCNTGKLEGLRYTFWDEC 443
           LMATDFQ+LIS+LSL+GFI GYPF R RSSP A+ VK+ I+DLC TGKLEG+RYT+WDEC
Sbjct: 116 LMATDFQSLISDLSLAGFIVGYPFNRQRSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDEC 175

Query: 442 FTSKNVELLLKDLHLHPVQSKSIVDKFAAVGILQGYLNFVNKTTQMKSK 296
           FTSKNVELLLK L+LHPVQSK+I+DKFAAVGILQGYL+ VN+  +   K
Sbjct: 176 FTSKNVELLLKPLNLHPVQSKTILDKFAAVGILQGYLDHVNRILKSNPK 224


>ref|XP_002269986.1| PREDICTED: putative Holliday junction resolvase [Vitis vinifera]
          Length = 169

 Score =  262 bits (670), Expect = 6e-68
 Identities = 129/169 (76%), Positives = 148/169 (87%)
 Frame = -3

Query: 802 MKYMKPLNLFQNLLKSNALERGRLLGLDVGDKYVGLAVSDFQNQIASPLSVLHRKKTNID 623
           MKY+KP+NLF +LLK  A ERGRLLGLDVGDKYVGLAVSD  N+IASPLSVL RKK+NID
Sbjct: 1   MKYVKPVNLFHDLLKMKATERGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNID 60

Query: 622 LMATDFQTLISELSLSGFIFGYPFTRLRSSPDAIQVKILIEDLCNTGKLEGLRYTFWDEC 443
           LMATDFQ+LIS+LSL+GFI GYPF R RSSP A+ VK+ I+DLC TGKLEG+RYT+WDEC
Sbjct: 61  LMATDFQSLISDLSLAGFIVGYPFNRQRSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDEC 120

Query: 442 FTSKNVELLLKDLHLHPVQSKSIVDKFAAVGILQGYLNFVNKTTQMKSK 296
           FTSKNVELLLK L+LHPVQSK+I+DKFAAVGILQGYL+ VN+  +   K
Sbjct: 121 FTSKNVELLLKPLNLHPVQSKTILDKFAAVGILQGYLDHVNRILKSNPK 169


>ref|XP_002298037.1| predicted protein [Populus trichocarpa] gi|222845295|gb|EEE82842.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  251 bits (642), Expect = 1e-64
 Identities = 120/170 (70%), Positives = 150/170 (88%)
 Frame = -3

Query: 802 MKYMKPLNLFQNLLKSNALERGRLLGLDVGDKYVGLAVSDFQNQIASPLSVLHRKKTNID 623
           MKY++PL+LF  LLK++A+ +GR LGLDVGDKYVGLAVSD  N+IASPLSVL RKK+NI+
Sbjct: 1   MKYVRPLSLFHELLKTSAINQGRFLGLDVGDKYVGLAVSDPLNKIASPLSVLLRKKSNIE 60

Query: 622 LMATDFQTLISELSLSGFIFGYPFTRLRSSPDAIQVKILIEDLCNTGKLEGLRYTFWDEC 443
           LMATDFQ+LISELSL GFI GYPF R R +PDA++VK+ ++DLC TGKLEG+++T+WDEC
Sbjct: 61  LMATDFQSLISELSLGGFIVGYPFDRQRGAPDAVRVKLFVDDLCKTGKLEGVKFTYWDEC 120

Query: 442 FTSKNVELLLKDLHLHPVQSKSIVDKFAAVGILQGYLNFVNKTTQMKSKD 293
           FTSKNVELL+K L LHPV +KSI+DKFAAVGILQGYL++VNK  +++S +
Sbjct: 121 FTSKNVELLVKPLDLHPVHAKSIMDKFAAVGILQGYLDYVNKKMKLESAE 170


>gb|ADL36700.1| GRF domain class transcription factor [Malus x domestica]
          Length = 170

 Score =  247 bits (631), Expect = 2e-63
 Identities = 123/162 (75%), Positives = 144/162 (88%)
 Frame = -3

Query: 802 MKYMKPLNLFQNLLKSNALERGRLLGLDVGDKYVGLAVSDFQNQIASPLSVLHRKKTNID 623
           M+Y+KPLNLFQ+LLK+N LERGRLLGLDVGDKYVG+AVSD  N+IASPLSVL RKK+NI 
Sbjct: 1   MRYVKPLNLFQDLLKANTLERGRLLGLDVGDKYVGVAVSDLHNKIASPLSVLLRKKSNIG 60

Query: 622 LMATDFQTLISELSLSGFIFGYPFTRLRSSPDAIQVKILIEDLCNTGKLEGLRYTFWDEC 443
           LMA DFQ+LISELSL GFI GYPF R + +PDA+QVK+ I+DL  T KLEGL+YT+WDE 
Sbjct: 61  LMAADFQSLISELSLVGFIVGYPFDRQKGTPDAVQVKLFIDDLSKTRKLEGLKYTYWDEG 120

Query: 442 FTSKNVELLLKDLHLHPVQSKSIVDKFAAVGILQGYLNFVNK 317
           FTSKNVELLLK L+L PVQSK+I+DKFAAVGILQGYL++VN+
Sbjct: 121 FTSKNVELLLKPLNLPPVQSKTIMDKFAAVGILQGYLDYVNR 162


>ref|XP_004143911.1| PREDICTED: putative Holliday junction resolvase-like isoform 2
           [Cucumis sativus] gi|449495809|ref|XP_004159951.1|
           PREDICTED: putative Holliday junction resolvase-like
           isoform 2 [Cucumis sativus]
          Length = 169

 Score =  243 bits (621), Expect = 3e-62
 Identities = 119/166 (71%), Positives = 143/166 (86%)
 Frame = -3

Query: 802 MKYMKPLNLFQNLLKSNALERGRLLGLDVGDKYVGLAVSDFQNQIASPLSVLHRKKTNID 623
           MKY++PL LF++L K +ALE GRLLGLDVGDKYVGLAVSD  N+IA PLSVL RKKT +D
Sbjct: 1   MKYVRPLMLFRDLTKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIACPLSVLLRKKTTMD 60

Query: 622 LMATDFQTLISELSLSGFIFGYPFTRLRSSPDAIQVKILIEDLCNTGKLEGLRYTFWDEC 443
           LMA DFQ +ISE SL+GFI GYPF RLR++PDA+QVKI I+DLC TGKLEG++YTFWDEC
Sbjct: 61  LMAQDFQKMISEFSLAGFIVGYPFDRLRNNPDAMQVKIFIDDLCKTGKLEGVKYTFWDEC 120

Query: 442 FTSKNVELLLKDLHLHPVQSKSIVDKFAAVGILQGYLNFVNKTTQM 305
           FTSKNVELL+K L+L P  SK+I+DKFAAVGILQGYL++ N+  ++
Sbjct: 121 FTSKNVELLIKPLNLLPAVSKTIIDKFAAVGILQGYLDYFNRRPEL 166


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