BLASTX nr result
ID: Panax21_contig00000307
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000307
(653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit... 133 7e-53
ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2... 91 7e-33
ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [S... 80 1e-29
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1... 82 2e-29
ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis ... 82 3e-27
>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
gi|359496684|ref|XP_003635300.1| PREDICTED: F-box
protein FBW2 isoform 2 [Vitis vinifera]
gi|296085646|emb|CBI29445.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 133 bits (334), Expect(2) = 7e-53
Identities = 61/91 (67%), Positives = 75/91 (82%)
Frame = +3
Query: 285 LDEKFVKNFHGLKVVGPLVVDYYHETNGWDACSNYSGSSGYLAWDFMAGDMDDYSDENIS 464
LDEK +K F GLKVVGPLV+D Y E NGWD CS YSGSSGYLAWDF+AG+MD Y DE +
Sbjct: 228 LDEKLIKKFSGLKVVGPLVIDCY-EGNGWDDCSAYSGSSGYLAWDFVAGEMDYYDDELYA 286
Query: 465 YEDEISIEDVEMRFYDGPDAEDAGYDWPQSP 557
++ S++D+E+RFYDG DA++AG+DWPQSP
Sbjct: 287 AWEDESMDDLELRFYDGFDADNAGFDWPQSP 317
Score = 100 bits (249), Expect(2) = 7e-53
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 2 GKHCKFLATLRRIMHPLEVIGKLSQDDEALAIAATMPKLKHLEIAYLLVSTESVIEI 172
GKHCKFL LRRIMHPLE+I KL+QDDEALAIAATMPKLKHLEIAYLLVSTE V++I
Sbjct: 152 GKHCKFLTGLRRIMHPLEIIDKLTQDDEALAIAATMPKLKHLEIAYLLVSTEPVLKI 208
>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
predicted protein [Populus trichocarpa]
Length = 321
Score = 91.3 bits (225), Expect(2) = 7e-33
Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Frame = +3
Query: 282 NLDEKFVKN-FHGLKVVGPLVVDYYHETNGWDA-CSNYSGSSGYLAWDFMAGDMDDYSDE 455
NLD KF K F L V+GPLV++ Y+E N W+ CS YS S YLAW F+AGD DY D+
Sbjct: 227 NLDNKFFKEKFQKLTVLGPLVMEDYYEANDWEEDCSEYSDDSDYLAWGFLAGDGGDYDDD 286
Query: 456 ---NISYEDEISIEDVEMRFYDGPDAEDAGYDWPQSP 557
+ ++DE +E++E+RFY+G DA Y WP SP
Sbjct: 287 ESYDEMWDDEGRLEELELRFYEGADA--GLYGWPPSP 321
Score = 75.5 bits (184), Expect(2) = 7e-33
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 2 GKHCKFLATLRRIMHPLEVIGKLSQDDEALAIAATMPKLKHLEIAYLLVSTESVIEI 172
GKHCK L L R MHPL+ G +QDDEA AIA TMPKLK LE+AY LVSTES+++I
Sbjct: 152 GKHCKLLVGLCRNMHPLDTEGLEAQDDEAYAIATTMPKLKRLEMAYHLVSTESLLQI 208
>ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [Sorghum bicolor]
gi|241934071|gb|EES07216.1| hypothetical protein
SORBIDRAFT_04g027350 [Sorghum bicolor]
Length = 365
Score = 79.7 bits (195), Expect(2) = 1e-29
Identities = 34/57 (59%), Positives = 48/57 (84%)
Frame = +2
Query: 2 GKHCKFLATLRRIMHPLEVIGKLSQDDEALAIAATMPKLKHLEIAYLLVSTESVIEI 172
GKHCK L LRR+MHP++++ K+ Q DEA AIA +MPKL+HLE+ Y+L++TE+V+EI
Sbjct: 199 GKHCKSLVGLRRVMHPIDLVDKVCQHDEAHAIACSMPKLRHLEMGYMLIATEAVLEI 255
Score = 76.3 bits (186), Expect(2) = 1e-29
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = +3
Query: 285 LDEKFVKNFH-GLKVVGPLVVDYYHETNGWDACSNYSGSSGYLAWDFMAGDMDDY----S 449
+D+KF++ H GL+V+GP V D Y E + W+ CS+YS S +W+FM DDY S
Sbjct: 273 VDDKFLRERHPGLRVLGPRVDDCY-ENSYWEECSDYSDDSSIYSWEFMD---DDYYAVGS 328
Query: 450 DENISYEDEISIEDVEMRFYDGPDAED-AGYDWPQSP 557
D+ ++D +E++E+RFY G +E AG+DWP SP
Sbjct: 329 DDEAIWDDGQGLENLEVRFYGGGFSESFAGFDWPPSP 365
>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
gi|356508075|ref|XP_003522786.1| PREDICTED: F-box
protein FBW2-like isoform 2 [Glycine max]
Length = 321
Score = 81.6 bits (200), Expect(2) = 2e-29
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 6/97 (6%)
Frame = +3
Query: 285 LDEKFVKN-FHGLKVVGPLVVDYYHETNGWDACSNYSGSSGYLAWDFMAGDMDD-YSDEN 458
LD F+K F LKV+GP V+D Y E++GWD S+ S SS YLAWDF+AG M++ Y D++
Sbjct: 228 LDHMFLKQKFPKLKVLGPFVLDTY-ESDGWDDFSDVSDSSEYLAWDFVAGGMEEYYVDDS 286
Query: 459 ISY----EDEISIEDVEMRFYDGPDAEDAGYDWPQSP 557
SY +DE +++++ FY+G EDAG WP SP
Sbjct: 287 DSYDGMWDDEGRLDELQFGFYEG--IEDAGMYWPPSP 321
Score = 73.2 bits (178), Expect(2) = 2e-29
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +2
Query: 2 GKHCKFLATLRRIMHPLEVIGKLSQDDEALAIAATMPKLKHLEIAYLLVSTESVIEI 172
GK+CK L L R MHPL+ K QDDEA AIA+TMPKLKHLE+AY L+ST V++I
Sbjct: 152 GKNCKLLEGLCRNMHPLDTASKPFQDDEAYAIASTMPKLKHLEMAYHLISTSGVLQI 208
>ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis sativus]
gi|449524052|ref|XP_004169037.1| PREDICTED: F-box
protein FBW2-like isoform 1 [Cucumis sativus]
gi|449524054|ref|XP_004169038.1| PREDICTED: F-box
protein FBW2-like isoform 2 [Cucumis sativus]
gi|449524056|ref|XP_004169039.1| PREDICTED: F-box
protein FBW2-like isoform 3 [Cucumis sativus]
Length = 318
Score = 82.4 bits (202), Expect(2) = 3e-27
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 285 LDEKFV-KNFHGLKVVGPLVVDYYHETNGWDACSNYSGSSGYLAWDFMAGDMDDYSDENI 461
LD+KF+ + F L+V+GPLV D Y E N WD S+YS S LAWDF AG DD +
Sbjct: 228 LDDKFLAEKFPKLRVLGPLVRDVY-ERNEWDEGSDYSYISEDLAWDFSAGYFDDAGSFDD 286
Query: 462 SYEDEISIEDVEMRFYDGPDAEDAGYDWPQSP 557
++DE +E +E+RFY+G D ++ + WP SP
Sbjct: 287 QWDDEGRLEGLELRFYEGVDEDNEAFGWPPSP 318
Score = 65.5 bits (158), Expect(2) = 3e-27
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +2
Query: 2 GKHCKFLATLRRIMHPLEVIGKLSQDDEALAIAATMPKLKHLEIAYLLVSTESVIEI 172
GK+CK L + R +HPL G S DDEA IAATMPKLKHLE+AY +ST+S++ I
Sbjct: 152 GKNCKALVGMCRNLHPLHTAGISSPDDEAYTIAATMPKLKHLEMAYHPLSTKSLLTI 208