BLASTX nr result

ID: Panax21_contig00000300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000300
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   619   e-175
ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   617   e-174
gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]          616   e-174
ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|1...   616   e-174
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              615   e-174

>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
            gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
            putative [Ricinus communis]
          Length = 389

 Score =  619 bits (1596), Expect = e-175
 Identities = 304/342 (88%), Positives = 315/342 (92%)
 Frame = -3

Query: 1382 GYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPRGLRSLNTVWA 1203
            GYKAGMTHI+REVEKPGSKLHKKETCEAVTIIETPPM        VKTPRGLRSLNTVWA
Sbjct: 48   GYKAGMTHIMREVEKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWA 107

Query: 1202 QHLSEDIKRRFYKNWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQ 1023
            QHLSE++KRRFYKNWC              ET+EGKK IQ+QLEKMKKYATVIRVLAHTQ
Sbjct: 108  QHLSEEVKRRFYKNWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQ 167

Query: 1022 IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK 843
            IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK
Sbjct: 168  IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK 227

Query: 842  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 663
            GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK
Sbjct: 228  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 287

Query: 662  LGKTGQESHTALTEFDRTEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLL 483
            LGK GQESHTA+TE+DRTEKDITP+GGFPHYG VKDDYL+IKGCCVGPKKRVVTLRQSLL
Sbjct: 288  LGKGGQESHTAITEYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLL 347

Query: 482  TQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKQKVYGRLKA 357
             QTSR+ALEEIKLKFIDTSSKFGHGRFQTT+EKQK YGRLKA
Sbjct: 348  KQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
            gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
            lycopersicum]
          Length = 389

 Score =  617 bits (1591), Expect = e-174
 Identities = 304/342 (88%), Positives = 314/342 (91%)
 Frame = -3

Query: 1382 GYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPRGLRSLNTVWA 1203
            GYKAGMTHIVREVEKPGSKLHKKETCEAVTI+ETPPM        VKTPRGLR LNTVWA
Sbjct: 48   GYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWA 107

Query: 1202 QHLSEDIKRRFYKNWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQ 1023
            QHLSEDIKRRFYKNWC             YETDEGKKDIQ+QLEK+KKYA VIRVLAHTQ
Sbjct: 108  QHLSEDIKRRFYKNWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQ 167

Query: 1022 IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK 843
            IRKMKGLKQKKAHLMEIQVNGG+IAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGK
Sbjct: 168  IRKMKGLKQKKAHLMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGK 227

Query: 842  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 663
            GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK
Sbjct: 228  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 287

Query: 662  LGKTGQESHTALTEFDRTEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLL 483
            LGK GQESHTALTEFDRTEKDITP+GGFPHYG VK+DYLLIKGCCVG KKRVVTLRQSLL
Sbjct: 288  LGKVGQESHTALTEFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGTKKRVVTLRQSLL 347

Query: 482  TQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKQKVYGRLKA 357
             QTSR+ALEEIKLKFIDTSSKFGHGRFQTT+EKQK YGRLKA
Sbjct: 348  NQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
          Length = 389

 Score =  616 bits (1588), Expect = e-174
 Identities = 303/342 (88%), Positives = 314/342 (91%)
 Frame = -3

Query: 1382 GYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPRGLRSLNTVWA 1203
            GYKAGMTHIVREVEKPGSKLHKKETCEAVTI+ETPPM        VKTPRGLR LNTVWA
Sbjct: 48   GYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWA 107

Query: 1202 QHLSEDIKRRFYKNWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQ 1023
            QHLSEDIKRRFYKNWC             YETDEGKKDIQ+QLEK+KKYA VIRVLAHTQ
Sbjct: 108  QHLSEDIKRRFYKNWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQ 167

Query: 1022 IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK 843
            IRKMKGLKQKKAHLMEIQVNGG+IAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGK
Sbjct: 168  IRKMKGLKQKKAHLMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGK 227

Query: 842  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 663
            GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK
Sbjct: 228  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 287

Query: 662  LGKTGQESHTALTEFDRTEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLL 483
            LGK GQESHTA+TEFDRTEK+ITP+GGF HYG VKDDYLLIKGCCVGPKKRVVTLRQSLL
Sbjct: 288  LGKVGQESHTAVTEFDRTEKEITPIGGFAHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLL 347

Query: 482  TQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKQKVYGRLKA 357
             QTSR+ALEEIKLKFIDTSSKFGHGRFQTT+EKQK YGRLKA
Sbjct: 348  NQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|118481111|gb|ABK92509.1|
            unknown [Populus trichocarpa] gi|222856157|gb|EEE93704.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  616 bits (1588), Expect = e-174
 Identities = 299/342 (87%), Positives = 315/342 (92%)
 Frame = -3

Query: 1382 GYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPRGLRSLNTVWA 1203
            GYKAGMTHIVREVEKPGSKLHKKETCEAVTI+ETPPM        +KTP GLR+LNTVWA
Sbjct: 48   GYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWA 107

Query: 1202 QHLSEDIKRRFYKNWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQ 1023
            QHLSE++KRRFYKNWC             YETDEGKK IQSQLEK+KKYATVIRVLAHTQ
Sbjct: 108  QHLSEEVKRRFYKNWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQ 167

Query: 1022 IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK 843
            IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMID+IGVTKGK
Sbjct: 168  IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGK 227

Query: 842  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 663
            GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK
Sbjct: 228  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYK 287

Query: 662  LGKTGQESHTALTEFDRTEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLL 483
            +GK GQE+HTA+TE+DRTEKDITP+GGFPHYG VKDDYL+IKGCCVGPKKRVVTLRQSLL
Sbjct: 288  VGKVGQETHTAITEYDRTEKDITPLGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLL 347

Query: 482  TQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKQKVYGRLKA 357
             QTSRLALEEIKLKF+DTSSKFGHGRFQTT+EKQK YGRLKA
Sbjct: 348  KQTSRLALEEIKLKFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  615 bits (1586), Expect = e-174
 Identities = 301/342 (88%), Positives = 315/342 (92%)
 Frame = -3

Query: 1382 GYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPRGLRSLNTVWA 1203
            GYKAGMTHIVREVEKPGSKLHKKETCEAVTI+ETPPM        VKTPRGLRSLNTVWA
Sbjct: 108  GYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWA 167

Query: 1202 QHLSEDIKRRFYKNWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQ 1023
            QHLSE++KRRFYKNWC             YET+EGKK IQ+QLEKMKKYA+VIRVLAHTQ
Sbjct: 168  QHLSEEVKRRFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQ 227

Query: 1022 IRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGK 843
            IRKMKGLKQKKAHLMEIQVNGGTIAQKVD+AYGFFEKQVP+DA+FQKDEMIDIIGVTKGK
Sbjct: 228  IRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGK 287

Query: 842  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 663
            GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK
Sbjct: 288  GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 347

Query: 662  LGKTGQESHTALTEFDRTEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLL 483
            LGK  QESHTALTEFDRTEKDITPMGGFPHYG VKDDY++IKGCCVGPKKRVVTLRQSLL
Sbjct: 348  LGKIEQESHTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLL 407

Query: 482  TQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKQKVYGRLKA 357
             QTSR+ALEEIKLKFIDTSSKFGHGRFQTT+EKQK YGR+KA
Sbjct: 408  KQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRMKA 449


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