BLASTX nr result

ID: Panax21_contig00000299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000299
         (1790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|1...   714   0.0  
ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   712   0.0  
gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]          711   0.0  
ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|1...   711   0.0  
gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              711   0.0  

>ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|118483469|gb|ABK93633.1|
            unknown [Populus trichocarpa] gi|222843894|gb|EEE81441.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  714 bits (1843), Expect = 0.0
 Identities = 347/389 (89%), Positives = 361/389 (92%)
 Frame = -1

Query: 1487 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVREV 1308
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDPNKPCKLTAFLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPNKPCKLTAFLGYKAGMTHIVREV 60

Query: 1307 EKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPHGLRSLNTVWAQHLSEDIKRRFYK 1128
            EKPGSKLHKKETCEAVTIIETPPM        +KTP GLR+LNTVWAQHLSE++KRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 1127 NWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 948
            NWC             YETDEGKK IQSQLEK+KKYATVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKRAFNKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 947  LMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 768
            LMEIQVNGGTIAQKVDFAY FFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 767  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKTGQESHTALT 588
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGKTGQE HTA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKTGQECHTAIT 300

Query: 587  EFDRTEKDISPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLAMEEIKL 408
            E+DRTEKDI+P+GGFPHYG VKDDYL+IKGCCVGPKKRVVTLRQ+LL QTSRLA EEIKL
Sbjct: 301  EYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAHEEIKL 360

Query: 407  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 321
            KF+DTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
            gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
            lycopersicum]
          Length = 389

 Score =  712 bits (1839), Expect = 0.0
 Identities = 348/389 (89%), Positives = 360/389 (92%)
 Frame = -1

Query: 1487 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVREV 1308
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPCKLTAFLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 1307 EKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPHGLRSLNTVWAQHLSEDIKRRFYK 1128
            EKPGSKLHKKETCEAVTI+ETPPM        VKTP GLR LNTVWAQHLSEDIKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120

Query: 1127 NWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 948
            NWC             YETDEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 947  LMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 768
            LMEIQVNGG+IAQKVDFAY FFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 767  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKTGQESHTALT 588
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK GQESHTALT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALT 300

Query: 587  EFDRTEKDISPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLAMEEIKL 408
            EFDRTEKDI+P+GGFPHYG VK+DYLLIKGCCVG KKRVVTLRQSLL QTSR+A+EEIKL
Sbjct: 301  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGTKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 407  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 321
            KFIDTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
          Length = 389

 Score =  711 bits (1836), Expect = 0.0
 Identities = 347/389 (89%), Positives = 360/389 (92%)
 Frame = -1

Query: 1487 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVREV 1308
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPCKLTAFLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 1307 EKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPHGLRSLNTVWAQHLSEDIKRRFYK 1128
            EKPGSKLHKKETCEAVTI+ETPPM        VKTP GLR LNTVWAQHLSEDIKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120

Query: 1127 NWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 948
            NWC             YETDEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 947  LMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 768
            LMEIQVNGG+IAQKVDFAY FFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 767  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKTGQESHTALT 588
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK GQESHTA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTAVT 300

Query: 587  EFDRTEKDISPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLAMEEIKL 408
            EFDRTEK+I+P+GGF HYG VKDDYLLIKGCCVGPKKRVVTLRQSLL QTSR+A+EEIKL
Sbjct: 301  EFDRTEKEITPIGGFAHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 407  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 321
            KFIDTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|118481111|gb|ABK92509.1|
            unknown [Populus trichocarpa] gi|222856157|gb|EEE93704.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  711 bits (1834), Expect = 0.0
 Identities = 342/389 (87%), Positives = 361/389 (92%)
 Frame = -1

Query: 1487 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVREV 1308
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP KPCKLT+FLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPTKPCKLTSFLGYKAGMTHIVREV 60

Query: 1307 EKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPHGLRSLNTVWAQHLSEDIKRRFYK 1128
            EKPGSKLHKKETCEAVTI+ETPPM        +KTP GLR+LNTVWAQHLSE++KRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 1127 NWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 948
            NWC             YETDEGKK IQSQLEK+KKYATVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 947  LMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 768
            LMEIQVNGGTIAQKVDFAY FFEKQVPIDAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240

Query: 767  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKTGQESHTALT 588
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+GK GQE+HTA+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAIT 300

Query: 587  EFDRTEKDISPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLAMEEIKL 408
            E+DRTEKDI+P+GGFPHYG VKDDYL+IKGCCVGPKKRVVTLRQSLL QTSRLA+EEIKL
Sbjct: 301  EYDRTEKDITPLGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 407  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 321
            KF+DTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  711 bits (1834), Expect = 0.0
 Identities = 345/388 (88%), Positives = 359/388 (92%)
 Frame = -1

Query: 1487 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVREV 1308
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 1307 EKPGSKLHKKETCEAVTIIETPPMXXXXXXXXVKTPHGLRSLNTVWAQHLSEDIKRRFYK 1128
            EKPGSKLHKKETCEAVTIIETPPM        VKTP GLR LNTVWAQHLSE++KRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 1127 NWCXXXXXXXXXXXXXYETDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 948
            NWC             YE+DEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 947  LMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 768
            LMEIQVNGGTIAQKVDFAY FFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 767  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKTGQESHTALT 588
            LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGK GQESH A+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300

Query: 587  EFDRTEKDISPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLAMEEIKL 408
            +FDRTEKDI+PMGGFPHYG VKDDYLLIKGCCVGPKKRVVTLRQSLL QTSR+A+EEIKL
Sbjct: 301  DFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 407  KFIDTSSKFGHGRFQTTQEKQKFYGRLK 324
            KFIDTSSKFGHGRFQTTQEKQKFYGRLK
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLK 388


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