BLASTX nr result

ID: Panax21_contig00000295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000295
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532723.1| proteasome subunit alpha type, putative [Ric...   164   7e-39
ref|XP_003632777.1| PREDICTED: proteasome subunit alpha type-6 i...   163   2e-38
ref|XP_002271929.1| PREDICTED: proteasome subunit alpha type-6 i...   163   2e-38
ref|XP_004141710.1| PREDICTED: proteasome subunit alpha type-6-l...   162   3e-38
gb|AFK46801.1| unknown [Medicago truncatula]                          161   6e-38

>ref|XP_002532723.1| proteasome subunit alpha type, putative [Ricinus communis]
           gi|223527531|gb|EEF29654.1| proteasome subunit alpha
           type, putative [Ricinus communis]
          Length = 246

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/92 (82%), Positives = 82/92 (89%)
 Frame = +3

Query: 231 LSTSPPTDARTLVQQARNEAAEFRHKYGYEMPVDALARWIADKSQVYTQHAYMRPLGVVA 410
           L+T    DARTLVQQARNEAAEFR KYGYEMPVD LA+WIADKSQ+YTQHAYMRPLGVVA
Sbjct: 79  LATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLAKWIADKSQIYTQHAYMRPLGVVA 138

Query: 411 MVLGIDDEFGPRLFKCDPAGHFFGHKTVLLGV 506
           MVLGIDDE+GPRL+KCDPAGHFFGHK    G+
Sbjct: 139 MVLGIDDEYGPRLYKCDPAGHFFGHKATSAGL 170


>ref|XP_003632777.1| PREDICTED: proteasome subunit alpha type-6 isoform 2 [Vitis
           vinifera]
          Length = 265

 Score =  163 bits (412), Expect = 2e-38
 Identities = 77/92 (83%), Positives = 81/92 (88%)
 Frame = +3

Query: 231 LSTSPPTDARTLVQQARNEAAEFRHKYGYEMPVDALARWIADKSQVYTQHAYMRPLGVVA 410
           L+T    DARTLVQQARNEAAEFR +YGYEMPVD LARWIADKSQVYTQHAYMRPLGVVA
Sbjct: 79  LATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLARWIADKSQVYTQHAYMRPLGVVA 138

Query: 411 MVLGIDDEFGPRLFKCDPAGHFFGHKTVLLGV 506
           M+LGIDDE GPRLFKCDPAGHFFGHK    G+
Sbjct: 139 MILGIDDENGPRLFKCDPAGHFFGHKATSAGL 170


>ref|XP_002271929.1| PREDICTED: proteasome subunit alpha type-6 isoform 1 [Vitis
           vinifera] gi|147797489|emb|CAN73517.1| hypothetical
           protein VITISV_005460 [Vitis vinifera]
           gi|297742984|emb|CBI35851.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  163 bits (412), Expect = 2e-38
 Identities = 77/92 (83%), Positives = 81/92 (88%)
 Frame = +3

Query: 231 LSTSPPTDARTLVQQARNEAAEFRHKYGYEMPVDALARWIADKSQVYTQHAYMRPLGVVA 410
           L+T    DARTLVQQARNEAAEFR +YGYEMPVD LARWIADKSQVYTQHAYMRPLGVVA
Sbjct: 79  LATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLARWIADKSQVYTQHAYMRPLGVVA 138

Query: 411 MVLGIDDEFGPRLFKCDPAGHFFGHKTVLLGV 506
           M+LGIDDE GPRLFKCDPAGHFFGHK    G+
Sbjct: 139 MILGIDDENGPRLFKCDPAGHFFGHKATSAGL 170


>ref|XP_004141710.1| PREDICTED: proteasome subunit alpha type-6-like [Cucumis sativus]
           gi|449480500|ref|XP_004155912.1| PREDICTED: proteasome
           subunit alpha type-6-like [Cucumis sativus]
          Length = 246

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/92 (82%), Positives = 82/92 (89%)
 Frame = +3

Query: 231 LSTSPPTDARTLVQQARNEAAEFRHKYGYEMPVDALARWIADKSQVYTQHAYMRPLGVVA 410
           L+T    DAR+LVQQARNEAAEFR +YGYEMPVD LA+WIADKSQVYTQHAYMRPLGVVA
Sbjct: 79  LATGITADARSLVQQARNEAAEFRFQYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVA 138

Query: 411 MVLGIDDEFGPRLFKCDPAGHFFGHKTVLLGV 506
           MVLGIDDE+GPRLFKCDPAGHFFGHK    G+
Sbjct: 139 MVLGIDDEYGPRLFKCDPAGHFFGHKATSAGL 170


>gb|AFK46801.1| unknown [Medicago truncatula]
          Length = 246

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/91 (82%), Positives = 81/91 (89%)
 Frame = +3

Query: 231 LSTSPPTDARTLVQQARNEAAEFRHKYGYEMPVDALARWIADKSQVYTQHAYMRPLGVVA 410
           L+T    DARTLVQQARNEAAEFRHK+GYEMPVD LA+WIADKSQVYTQHAYMRPLGVVA
Sbjct: 79  LATGMTADARTLVQQARNEAAEFRHKFGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVA 138

Query: 411 MVLGIDDEFGPRLFKCDPAGHFFGHKTVLLG 503
           MVLGIDDE GP+L+KCDPAGH+FGHK    G
Sbjct: 139 MVLGIDDENGPQLYKCDPAGHYFGHKATSAG 169


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