BLASTX nr result

ID: Panax21_contig00000277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000277
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142812.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   110   2e-22
ref|XP_002328810.1| predicted protein [Populus trichocarpa] gi|1...   109   4e-22
ref|XP_002519364.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   105   5e-21
ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group] g...   100   3e-19

>ref|XP_004142812.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 3-B-like [Cucumis sativus]
          Length = 74

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/56 (91%), Positives = 52/56 (92%)
 Frame = +2

Query: 8   MAKKPLGPTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGETAYNKI 175
           MA KPLG TGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGE  YN+I
Sbjct: 1   MANKPLGSTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRI 56


>ref|XP_002328810.1| predicted protein [Populus trichocarpa] gi|118484462|gb|ABK94107.1|
           unknown [Populus trichocarpa]
           gi|118487969|gb|ABK95806.1| unknown [Populus
           trichocarpa] gi|222839108|gb|EEE77459.1| predicted
           protein [Populus trichocarpa]
          Length = 68

 Score =  109 bits (272), Expect = 4e-22
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = +2

Query: 17  KPLGPTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGETAYNKIY 178
           KPLG TGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFG+YLVGE  YNKIY
Sbjct: 3   KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGVYLVGEQVYNKIY 56


>ref|XP_002519364.1| conserved hypothetical protein [Ricinus communis]
           gi|223541431|gb|EEF42981.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = +2

Query: 17  KPLGPTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGETAYNKIY 178
           KPLG TGEFF+RRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGE  Y+K+Y
Sbjct: 3   KPLGTTGEFFKRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYDKLY 56


>ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 3-B [Vitis vinifera]
          Length = 70

 Score =  105 bits (263), Expect = 5e-21
 Identities = 47/54 (87%), Positives = 50/54 (92%)
 Frame = +2

Query: 17  KPLGPTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGETAYNKIY 178
           KPLGPTGEFFRRRDEWRKHPML+ Q RHATPGLGIA+VAF IYLVGE AYNK+Y
Sbjct: 3   KPLGPTGEFFRRRDEWRKHPMLNKQLRHATPGLGIAVVAFSIYLVGEAAYNKLY 56


>ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group]
           gi|46390154|dbj|BAD15588.1| unknown protein [Oryza
           sativa Japonica Group] gi|46390350|dbj|BAD15815.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|125539926|gb|EAY86321.1| hypothetical protein
           OsI_07695 [Oryza sativa Indica Group]
           gi|125582543|gb|EAZ23474.1| hypothetical protein
           OsJ_07168 [Oryza sativa Japonica Group]
           gi|215704134|dbj|BAG92974.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765172|dbj|BAG86869.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255671009|dbj|BAH91756.1| Os02g0564200 [Oryza sativa
           Japonica Group]
          Length = 66

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = +2

Query: 8   MAKKPLGPTGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGETAYNKIY 178
           MA K L  TGEFFRRRD+WR+HPM+ NQ RHATPGLGIA+VAFGIYLVGE AYN++Y
Sbjct: 1   MAGKGLNATGEFFRRRDDWRRHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLY 57


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