BLASTX nr result

ID: Panax21_contig00000266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000266
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   221   3e-55
ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_002334259.1| predicted protein [Populus trichocarpa] gi|2...   184   3e-44
ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...   180   6e-43

>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  221 bits (562), Expect = 3e-55
 Identities = 128/241 (53%), Positives = 146/241 (60%), Gaps = 13/241 (5%)
 Frame = -3

Query: 1034 CKGIPQVMQP-SFPFHTQXXXXXXXXXXXAEDLELAMAINASLQST-QERPLALGTQPDP 861
            CKGIPQ M P +F  + Q           AEDLELAMAINAS+QS  QE P  L +    
Sbjct: 269  CKGIPQAMHPPAFLHNAQTPAVPPTAPPTAEDLELAMAINASIQSAMQEGPPLLDSPSSF 328

Query: 860  VSHASTSWINPTEITNNNISAALGAP---APFKGSSSGWEVQEVGPSGNPDPS------- 711
             + ASTSW N   ITN+N   AL AP   A  K SSS   V E GPS N           
Sbjct: 329  ENGASTSWNNSVNITNHNCPDALVAPVAPASSKASSSECVVHEAGPSTNSTQHIQIETHI 388

Query: 710  -DIPSVVQTTLENXXXXXXXXXXXXXXXSLDDGPIHYPSIDSTPVDLSSPVVETLPATTD 534
             DIP    T                    +DDGP+ YPSIDS+PVDL+SP  ET  A ++
Sbjct: 389  PDIPVQASTA----------SAPPIADEVVDDGPVQYPSIDSSPVDLTSPAFETSAAASE 438

Query: 533  GGKEDGISSSCVICLDAPVEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQIIRLY 354
              KE G +SSCVICLDAP+EGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQ+++LY
Sbjct: 439  QSKEGGAASSCVICLDAPIEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLY 498

Query: 353  A 351
            +
Sbjct: 499  S 499


>ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  189 bits (480), Expect = 1e-45
 Identities = 114/233 (48%), Positives = 135/233 (57%), Gaps = 5/233 (2%)
 Frame = -3

Query: 1034 CKGIPQVMQP-SFPFHTQXXXXXXXXXXXAEDLELAMAINASLQSTQERPLALGTQPDPV 858
            CKGI QVM P +F  ++Q           AED+E+AMA+NA +QS  ERP+      DP 
Sbjct: 245  CKGIQQVMHPPAFLHNSQAPAVQATAPPSAEDIEIAMAMNAYIQSAAERPIF-----DPH 299

Query: 857  SHA----STSWINPTEITNNNISAALGAPAPFKGSSSGWEVQEVGPSGNPDPSDIPSVVQ 690
            S A    STSW   +      I            +SS  +VQ    + +  PS  P V +
Sbjct: 300  SSAGASSSTSWTTSSSTQQTKIQ-----------NSSIADVQTATDAQDSVPSAPPIVDE 348

Query: 689  TTLENXXXXXXXXXXXXXXXSLDDGPIHYPSIDSTPVDLSSPVVETLPATTDGGKEDGIS 510
                                 ++DGPIHYPSIDS+P+D SS  VE LP  T   +EDG S
Sbjct: 349  I--------------------VEDGPIHYPSIDSSPIDTSSLSVENLPENTGEKREDGGS 388

Query: 509  SSCVICLDAPVEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQIIRLYA 351
            SSCVICLDA VEGACIPCGHMAGCMSCL EIKAKKWGCPVCRAKIDQ++RLYA
Sbjct: 389  SSCVICLDALVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVVRLYA 441


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  185 bits (470), Expect = 1e-44
 Identities = 110/229 (48%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = -3

Query: 1034 CKGIPQVMQP-SFPFHTQXXXXXXXXXXXAEDLELAMAINASLQSTQERPLALGTQPDPV 858
            CKGIPQVM P  F   +Q            ED E+AMAINAS+QS      A+  QP   
Sbjct: 245  CKGIPQVMHPPEFLSKSQNLAVQATAPPSDEDPEIAMAINASIQS------AMVEQPISD 298

Query: 857  SHASTSWINPTEITNNNISAALGAPAPFKGSSSGWEVQEVGPSGNPDPSDIPSVVQTTLE 678
            +H+ST   + T   ++  S           +SS  +VQ    + +  PS  P V +    
Sbjct: 299  THSSTGASSSTSCVSSGSSTQQTKIL----NSSVADVQTATDAQDSVPSAPPIVDEL--- 351

Query: 677  NXXXXXXXXXXXXXXXSLDDGPIHYPSIDSTPVDLSSPVVETLPATTDGGKEDGISSSCV 498
                             ++DGPIHYPSIDS+P+D+SS  +E LP  T   KEDG SSSCV
Sbjct: 352  -----------------IEDGPIHYPSIDSSPLDISSLPIENLPENTGEKKEDGGSSSCV 394

Query: 497  ICLDAPVEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQIIRLYA 351
            ICLDAPVEGACIPCGHM GCMSCL EIKAKKWGCPVCRA I+Q++RLYA
Sbjct: 395  ICLDAPVEGACIPCGHMVGCMSCLKEIKAKKWGCPVCRATINQVVRLYA 443


>ref|XP_002334259.1| predicted protein [Populus trichocarpa] gi|222870334|gb|EEF07465.1|
            predicted protein [Populus trichocarpa]
          Length = 455

 Score =  184 bits (467), Expect = 3e-44
 Identities = 105/224 (46%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1019 QVMQP-SFPFHTQXXXXXXXXXXXAEDLELAMAINASLQSTQERPLALGTQPDPVSHAST 843
            QVM P  F   +Q            ED E+AMA+NAS+QS         T     + +S+
Sbjct: 252  QVMHPLEFLSRSQNLAVQATAPPSDEDPEIAMAVNASIQSAMAEQPIFDTHSSTGASSSS 311

Query: 842  SWINPTEITNNNISAALGAPAPFKGSSSGWEVQEVGPSGNPDPSDIPSVVQTTLENXXXX 663
            SW  P             AP P K +SSGW   E   + +  PS  P V +         
Sbjct: 312  SWNCPVNAGGQGAMDVPAAPPP-KTTSSGWAPYETTDAQDSVPSAPPIVDEL-------- 362

Query: 662  XXXXXXXXXXXSLDDGPIHYPSIDSTPVDLSSPVVETLPATTDGGKEDGISSSCVICLDA 483
                        +DD PIHYPSIDS+P+D SS  +E LP  T   KEDG SSSCVICLDA
Sbjct: 363  ------------IDDCPIHYPSIDSSPLDFSSLPLENLPENTGEKKEDGDSSSCVICLDA 410

Query: 482  PVEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQIIRLYA 351
            PVEGACIPCGHM GCMSCL EIKAK+WGCPVCRA I+Q++RLYA
Sbjct: 411  PVEGACIPCGHMVGCMSCLKEIKAKEWGCPVCRATINQVVRLYA 454


>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like [Cucumis
            sativus]
          Length = 459

 Score =  180 bits (456), Expect = 6e-43
 Identities = 107/231 (46%), Positives = 130/231 (56%), Gaps = 3/231 (1%)
 Frame = -3

Query: 1034 CKGIPQVMQPSFPFHTQXXXXXXXXXXXAEDLELAMAINASLQST-QERPLALGTQPDPV 858
            CKGI  +M P+F                +ED+ELAMAINAS+QS    RP      P+P 
Sbjct: 245  CKGITSMMHPTFMSGNHGPGVSATAPPDSEDVELAMAINASIQSVIHGRPPF--PDPNPS 302

Query: 857  SHASTSWINPTEITNNNISAALGAPAPFKGSSSGWEVQEVGPS--GNPDPSDIPSVVQTT 684
            S ASTS  +   +     S  LG        ++  E+ E G S   N  P      +QT 
Sbjct: 303  SEASTSSSHTGPVGQTTHSTKLG--------TNESEMNEAGQSITANEHPQ-----IQTN 349

Query: 683  LENXXXXXXXXXXXXXXXSLDDGPIHYPSIDSTPVDLSSPVVETLPATTDGGKEDGISSS 504
            +                  LD+G IHYPSIDS+P+DLSS      P     GK++  SSS
Sbjct: 350  VT--PPDAVPSAPLAADEILDNGAIHYPSIDSSPIDLSSQTAHNAPLQAGEGKDETSSSS 407

Query: 503  CVICLDAPVEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQIIRLYA 351
            CVICLDAPV+GACIPCGHMAGCM+CL EIK+KKWGCPVCRAKIDQ++RLYA
Sbjct: 408  CVICLDAPVQGACIPCGHMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYA 458


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