BLASTX nr result

ID: Panax21_contig00000261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000261
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234356.1| cullin 4 [Solanum lycopersicum] gi|159895408...   288   2e-75
ref|XP_002270764.2| PREDICTED: cullin-4 [Vitis vinifera]              275   1e-71
emb|CBI30911.3| unnamed protein product [Vitis vinifera]              275   1e-71
emb|CAN75926.1| hypothetical protein VITISV_010491 [Vitis vinifera]   275   1e-71
ref|XP_002519675.1| cullin, putative [Ricinus communis] gi|22354...   269   1e-69

>ref|NP_001234356.1| cullin 4 [Solanum lycopersicum] gi|159895408|gb|ABX09988.1| cullin
           4 [Solanum lycopersicum]
          Length = 785

 Score =  288 bits (737), Expect = 2e-75
 Identities = 140/161 (86%), Positives = 152/161 (94%)
 Frame = -2

Query: 863 IVCLFEAKPTLPTNFEENTWATLKLAISSIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 684
           ++ L +AKPTLPTNFEENTWATLK AIS+IFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY
Sbjct: 70  VIKLLKAKPTLPTNFEENTWATLKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 129

Query: 683 QQIEKECETHISIALQSLVGQSEDLVVFLSLVEKCWQDFYDQMLMIRDIALYLDRTYVKQ 504
           Q+IEKECE+HI+ AL+SLVGQ+EDLVVFLSLVE+CWQDF DQMLMIR IALYLDRTYVKQ
Sbjct: 130 QRIEKECESHIAAALRSLVGQNEDLVVFLSLVERCWQDFCDQMLMIRGIALYLDRTYVKQ 189

Query: 503 TPNVRSLWDMGSQLFHKHLSLASEVEYKTVFGLLIMIESER 381
           TPNVRSLWDMG QLF KHLSLASEVE+KTVFGLL MIE+ER
Sbjct: 190 TPNVRSLWDMGLQLFRKHLSLASEVEHKTVFGLLQMIETER 230


>ref|XP_002270764.2| PREDICTED: cullin-4 [Vitis vinifera]
          Length = 828

 Score =  275 bits (704), Expect = 1e-71
 Identities = 136/161 (84%), Positives = 145/161 (90%)
 Frame = -2

Query: 863 IVCLFEAKPTLPTNFEENTWATLKLAISSIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 684
           ++ L +AKPTLPTNFEE+TWA LK AIS+IFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY
Sbjct: 113 VIKLLKAKPTLPTNFEEDTWAKLKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 172

Query: 683 QQIEKECETHISIALQSLVGQSEDLVVFLSLVEKCWQDFYDQMLMIRDIALYLDRTYVKQ 504
           Q+IEKECE+HI  ALQSLVGQS DLVVFLSLVEKCWQD  DQMLMIR IALYLDRTYVKQ
Sbjct: 173 QRIEKECESHIRAALQSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQ 232

Query: 503 TPNVRSLWDMGSQLFHKHLSLASEVEYKTVFGLLIMIESER 381
           TPNVRSLWDMG QLF KHLSL+ EVE+KTV GLL MIE ER
Sbjct: 233 TPNVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIERER 273


>emb|CBI30911.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  275 bits (704), Expect = 1e-71
 Identities = 136/161 (84%), Positives = 145/161 (90%)
 Frame = -2

Query: 863 IVCLFEAKPTLPTNFEENTWATLKLAISSIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 684
           ++ L +AKPTLPTNFEE+TWA LK AIS+IFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY
Sbjct: 87  VIKLLKAKPTLPTNFEEDTWAKLKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 146

Query: 683 QQIEKECETHISIALQSLVGQSEDLVVFLSLVEKCWQDFYDQMLMIRDIALYLDRTYVKQ 504
           Q+IEKECE+HI  ALQSLVGQS DLVVFLSLVEKCWQD  DQMLMIR IALYLDRTYVKQ
Sbjct: 147 QRIEKECESHIRAALQSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQ 206

Query: 503 TPNVRSLWDMGSQLFHKHLSLASEVEYKTVFGLLIMIESER 381
           TPNVRSLWDMG QLF KHLSL+ EVE+KTV GLL MIE ER
Sbjct: 207 TPNVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIERER 247


>emb|CAN75926.1| hypothetical protein VITISV_010491 [Vitis vinifera]
          Length = 806

 Score =  275 bits (704), Expect = 1e-71
 Identities = 136/161 (84%), Positives = 145/161 (90%)
 Frame = -2

Query: 863 IVCLFEAKPTLPTNFEENTWATLKLAISSIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 684
           ++ L +AKPTLPTNFEE+TWA LK AIS+IFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY
Sbjct: 87  VIKLLKAKPTLPTNFEEDTWAKLKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 146

Query: 683 QQIEKECETHISIALQSLVGQSEDLVVFLSLVEKCWQDFYDQMLMIRDIALYLDRTYVKQ 504
           Q+IEKECE+HI  ALQSLVGQS DLVVFLSLVEKCWQD  DQMLMIR IALYLDRTYVKQ
Sbjct: 147 QRIEKECESHIRAALQSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQ 206

Query: 503 TPNVRSLWDMGSQLFHKHLSLASEVEYKTVFGLLIMIESER 381
           TPNVRSLWDMG QLF KHLSL+ EVE+KTV GLL MIE ER
Sbjct: 207 TPNVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIERER 247


>ref|XP_002519675.1| cullin, putative [Ricinus communis] gi|223541092|gb|EEF42648.1|
           cullin, putative [Ricinus communis]
          Length = 807

 Score =  269 bits (687), Expect = 1e-69
 Identities = 133/161 (82%), Positives = 143/161 (88%)
 Frame = -2

Query: 863 IVCLFEAKPTLPTNFEENTWATLKLAISSIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLY 684
           ++ L +AKPTLP NFEE+TWA L+ AI +IFLKQPD CDLEKLYQAVNDLCLHKMGGNLY
Sbjct: 115 VIKLVKAKPTLPINFEEDTWAKLQSAIKAIFLKQPDSCDLEKLYQAVNDLCLHKMGGNLY 174

Query: 683 QQIEKECETHISIALQSLVGQSEDLVVFLSLVEKCWQDFYDQMLMIRDIALYLDRTYVKQ 504
           QQIEKECE HIS AL+SLVGQS DLVVFLSLVE+CWQD  DQMLMIR IALYLDRTYVKQ
Sbjct: 175 QQIEKECEAHISAALRSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQ 234

Query: 503 TPNVRSLWDMGSQLFHKHLSLASEVEYKTVFGLLIMIESER 381
           TPNVRSLWDMG QLF KHLSL+ EVE+KTV GLL MIESER
Sbjct: 235 TPNVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESER 275


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