BLASTX nr result

ID: Panax21_contig00000259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000259
         (3004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g...   674   0.0  
ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g...   617   e-174
ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g...   616   e-173
ref|XP_002323868.1| predicted protein [Populus trichocarpa] gi|2...   605   e-170
ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g...   587   e-165

>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
            gi|296082939|emb|CBI22240.3| unnamed protein product
            [Vitis vinifera]
          Length = 548

 Score =  674 bits (1739), Expect = 0.0
 Identities = 363/549 (66%), Positives = 409/549 (74%), Gaps = 2/549 (0%)
 Frame = -1

Query: 2818 MAGQRNNYGKRSHSHSDYADNGRNKRKNTGDERESFSIGPEDSVYRYLCPXXXXXXXXXX 2639
            MAGQRN+YGKR+HS SDY DNG NKR+N GD+R+ F+I PED+VYRYLCP          
Sbjct: 1    MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60

Query: 2638 XXXIVKQIRADSRSKIRIGETVSGCDERVVTIYSSSDETNDFDGTDNRVCPSQDALFRVF 2459
               IVKQ+R D++SKIRIGETV GC+ERVVTIYSSSDETN FD +D  V P+QDALFRV 
Sbjct: 61   GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120

Query: 2458 DRVIADDLT-EDSEEGAQVTVRLLVPSDXXXXXXXXXXXXXQSIRSDTGAQIRILKDDHL 2282
            DRV+++++  EDSEE +QVTVRLLVPSD             QSIRS++GAQ+RILKDDHL
Sbjct: 121  DRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDHL 180

Query: 2281 PPCALSSDELVQISGEAPVVRKALYQIASRLHDNPSRSQHMLISATPNAYASGGSLIGPP 2102
            P CALSSDELVQISGE  +VRKALYQIASRLHDNPSRSQH+L SA P  Y+SGGSL+GP 
Sbjct: 181  PSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGPT 240

Query: 2101 GGAPIMGLTPLMGSSGEYKGESGDWSRSFYSASRDESSSKEFSLHMVCPTANXXXXXXXX 1922
             GAPIMGL PL+G+ G Y+G+SGDWSRS YSA RDE+SSKEFSL +VCP  N        
Sbjct: 241  SGAPIMGLAPLVGTYGGYRGDSGDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIGKG 300

Query: 1921 XXXINQIRQDSGAAIKVDS-SAAAGDDCIIAISAKEFFEDTFSPTIEAALHLQPRCSEKV 1745
               INQIRQ+SGAAIKVDS SAA  DDC+IAISAKEFFEDTFSPTIEAA+ LQPRCSEKV
Sbjct: 301  GVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEKV 360

Query: 1744 ERDSGLISFTTRLLVPTSRXXXXXXXXXXXITAMRNSTKANIRILSKENLPKVASEDDEM 1565
            ERDSG++SFTTRLLVPTSR           IT MR  TKANIRILSKENLPKVASEDDEM
Sbjct: 361  ERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEM 420

Query: 1564 VQISGDLDVAKEAFLQVTSRLRANLFEREGAVSAFVPVLPYLPMPADGPDGMKYESRDSR 1385
            VQI+GDLDVAK+A +QVT+RLRANLF+REGAVSAFVPVLPYLPM ADG DG+KY+ RD++
Sbjct: 421  VQIAGDLDVAKDALIQVTTRLRANLFDREGAVSAFVPVLPYLPMAADGSDGLKYDGRDNK 480

Query: 1384 RHGREHXXXXXXXXXSDLPAGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQNS 1205
            RHGR           SDL A DA                                 GQN 
Sbjct: 481  RHGRGPSYSGGYGGSSDLAAADA-YGGYGSQIGGSGSGYGAYGGYSSGRGGGSGVSGQNP 539

Query: 1204 ASRRKSYGY 1178
            ASRRKSYGY
Sbjct: 540  ASRRKSYGY 548


>ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 561

 Score =  617 bits (1591), Expect = e-174
 Identities = 323/503 (64%), Positives = 377/503 (74%), Gaps = 3/503 (0%)
 Frame = -1

Query: 2818 MAGQRNNYGKRSHSHSDYADNGRNKRKNTGDERESFSIGPEDSVYRYLCPXXXXXXXXXX 2639
            M GQR+ YGKR HS SD+ DNG NKR+N GD+RE F I  ED+VYRY+CP          
Sbjct: 1    MGGQRSGYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGR 59

Query: 2638 XXXIVKQIRADSRSKIRIGETVSGCDERVVTIYSSSDETNDFDGTDNRVCPSQDALFRVF 2459
               IVKQ+R ++++KIRIGETV GC+ERVVTIY  SDETN  +G  N V P+QDALF+V 
Sbjct: 60   GGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKVH 119

Query: 2458 DRVIADDL--TEDSEEGAQVTVRLLVPSDXXXXXXXXXXXXXQSIRSDTGAQIRILKDDH 2285
            DRV+A+D    +D + G QVT +LLVPSD             Q+IR +TGAQIRILKDDH
Sbjct: 120  DRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDH 179

Query: 2284 LPPCALSSDELVQISGEAPVVRKALYQIASRLHDNPSRSQHMLISATPNAYASGGSLIGP 2105
            LP CALSSDELVQI+G+A VV+KALYQIASRLHDNPSRSQH+L SA    Y +GGSLIGP
Sbjct: 180  LPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIGP 239

Query: 2104 PGGAPIMGLTPLMGSSGEYKGESGDWS-RSFYSASRDESSSKEFSLHMVCPTANXXXXXX 1928
              GAPI+G+ PL+GS G YKG++GDW  RS YSA RDE+SSKEFS+ +VCPT N      
Sbjct: 240  GAGAPIVGIAPLVGSYGGYKGDTGDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVIG 299

Query: 1927 XXXXXINQIRQDSGAAIKVDSSAAAGDDCIIAISAKEFFEDTFSPTIEAALHLQPRCSEK 1748
                 INQIRQDSGA IKVDSS   GD+C+IAIS KEFFE+TFSPTIEAA+ LQPRCSEK
Sbjct: 300  KGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEK 359

Query: 1747 VERDSGLISFTTRLLVPTSRXXXXXXXXXXXITAMRNSTKANIRILSKENLPKVASEDDE 1568
            VERDSG+ISFTTRLLVPT+R           IT MR  TKANIRI+SKENLPK+A+EDDE
Sbjct: 360  VERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDDE 419

Query: 1567 MVQISGDLDVAKEAFLQVTSRLRANLFEREGAVSAFVPVLPYLPMPADGPDGMKYESRDS 1388
            MVQISGDLDVAK+A + V +RLRANLF+REGA+SAF+PVLPYLP+ ADG DG+ Y+ RD 
Sbjct: 420  MVQISGDLDVAKDALVHVLTRLRANLFDREGALSAFLPVLPYLPVSADGSDGLNYDGRDG 479

Query: 1387 RRHGREHXXXXXXXXXSDLPAGD 1319
            +RHGR H         SDL AGD
Sbjct: 480  KRHGRGHSYSSGYGGSSDLAAGD 502


>ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 548

 Score =  616 bits (1589), Expect = e-173
 Identities = 322/503 (64%), Positives = 379/503 (75%), Gaps = 3/503 (0%)
 Frame = -1

Query: 2818 MAGQRNNYGKRSHSHSDYADNGRNKRKNTGDERESFSIGPEDSVYRYLCPXXXXXXXXXX 2639
            M GQR+ YGKR HS SD+ DNG NKR+N GD+RE F I  ED+VYRY+CP          
Sbjct: 1    MGGQRSGYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGR 59

Query: 2638 XXXIVKQIRADSRSKIRIGETVSGCDERVVTIYSSSDETNDFDGTDNRVCPSQDALFRVF 2459
               IVKQ+R ++++KIRIGETV GC+ERVVTIYS SDETN  +G  N V P+QDALF+V 
Sbjct: 60   GGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVSPAQDALFKVH 119

Query: 2458 DRVIADDL--TEDSEEGAQVTVRLLVPSDXXXXXXXXXXXXXQSIRSDTGAQIRILKDDH 2285
            DRV+A+D    +D + G QVT +LLVPSD             Q+IRS+TGAQIRILKDDH
Sbjct: 120  DRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDH 179

Query: 2284 LPPCALSSDELVQISGEAPVVRKALYQIASRLHDNPSRSQHMLISATPNAYASGGSLIGP 2105
            LP CALSSDELVQI+G+A VV+KAL QIASRLHDNPSRSQH+L SA P  Y +GGSLIGP
Sbjct: 180  LPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIGP 239

Query: 2104 PGGAPIMGLTPLMGSSGEYKGESGDWS-RSFYSASRDESSSKEFSLHMVCPTANXXXXXX 1928
              GAPI+G+ PL+G+ G YKG++GDW  RS YSA RDE+S+KEFS+ +VCPT N      
Sbjct: 240  GAGAPIVGIAPLVGAYGGYKGDTGDWPPRSMYSAPRDEASTKEFSVRLVCPTGNIGGVIG 299

Query: 1927 XXXXXINQIRQDSGAAIKVDSSAAAGDDCIIAISAKEFFEDTFSPTIEAALHLQPRCSEK 1748
                 INQIRQ+SGA IKVDSS   GD+C+IAIS KEFFE+TFSPTIEAA+ LQPRCSEK
Sbjct: 300  KGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEK 359

Query: 1747 VERDSGLISFTTRLLVPTSRXXXXXXXXXXXITAMRNSTKANIRILSKENLPKVASEDDE 1568
            VERDSG+ISFTTRLLVPTSR           IT MR  TKANIRI+SKENLPK+ASEDDE
Sbjct: 360  VERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDDE 419

Query: 1567 MVQISGDLDVAKEAFLQVTSRLRANLFEREGAVSAFVPVLPYLPMPADGPDGMKYESRDS 1388
            MVQISGDLD+AK+A + V +RLRANLF+REGA+S+F+PVLPYLP+ ADG DG+ Y+ RD 
Sbjct: 420  MVQISGDLDIAKDALVHVLTRLRANLFDREGALSSFLPVLPYLPVSADGSDGLNYDGRDG 479

Query: 1387 RRHGREHXXXXXXXXXSDLPAGD 1319
            +RHGR H         SDL AGD
Sbjct: 480  KRHGRGHSYSSGYGGSSDLAAGD 502


>ref|XP_002323868.1| predicted protein [Populus trichocarpa] gi|222866870|gb|EEF04001.1|
            predicted protein [Populus trichocarpa]
          Length = 531

 Score =  605 bits (1559), Expect = e-170
 Identities = 313/484 (64%), Positives = 375/484 (77%), Gaps = 2/484 (0%)
 Frame = -1

Query: 2818 MAGQRNNYGKRSHSHSDYADNGRNKRKNTGDERESFSIGPEDSVYRYLCPXXXXXXXXXX 2639
            MAGQRN+YGKR+HS SDY D G NKR+N+GD+RE F I  +D+VYRYLCP          
Sbjct: 1    MAGQRNSYGKRAHSQSDY-DIGGNKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIGR 59

Query: 2638 XXXIVKQIRADSRSKIRIGETVSGCDERVVTIYSSSDETNDFDGTDNRVCPSQDALFRVF 2459
               I+KQ+R D++SKIR+GETV GC+ERVVTIYS SDETN+++ + N + P+QDALFRV 
Sbjct: 60   GGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISPAQDALFRVH 119

Query: 2458 DRVIADDLT--EDSEEGAQVTVRLLVPSDXXXXXXXXXXXXXQSIRSDTGAQIRILKDDH 2285
            D+VIA+DL   +DSE   QVT +LLVPSD             Q+IRS+TGA IRILKD+H
Sbjct: 120  DKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDEH 179

Query: 2284 LPPCALSSDELVQISGEAPVVRKALYQIASRLHDNPSRSQHMLISATPNAYASGGSLIGP 2105
            LPPCALSSDELVQISGEA V++KALYQIASRLHDNPSRSQH+L+SA PN Y+S GSL+GP
Sbjct: 180  LPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSVGSLVGP 239

Query: 2104 PGGAPIMGLTPLMGSSGEYKGESGDWSRSFYSASRDESSSKEFSLHMVCPTANXXXXXXX 1925
               API+G+ PLMG  G +KG++GDWSRS YSA RDE +SKEFSL +VCPTAN       
Sbjct: 240  SAAAPIVGIAPLMGPYGGFKGDTGDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGK 299

Query: 1924 XXXXINQIRQDSGAAIKVDSSAAAGDDCIIAISAKEFFEDTFSPTIEAALHLQPRCSEKV 1745
                INQIRQ+SGA IKVDSS A GDDC+I ISAKE + D +SPTIEAA+ LQPRCSEK+
Sbjct: 300  GGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIY-DHYSPTIEAAVRLQPRCSEKM 358

Query: 1744 ERDSGLISFTTRLLVPTSRXXXXXXXXXXXITAMRNSTKANIRILSKENLPKVASEDDEM 1565
            ERDSGLISFTTRLLVP+SR           I  MR  TKA IRI  KENLPKVAS+DDEM
Sbjct: 359  ERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEM 418

Query: 1564 VQISGDLDVAKEAFLQVTSRLRANLFEREGAVSAFVPVLPYLPMPADGPDGMKYESRDSR 1385
            VQI+GDLDVAK+A +Q++ RLRAN+F+REGA+SA +PVLPYLP+ A+G +G+ Y+SRD +
Sbjct: 419  VQIAGDLDVAKDALIQISRRLRANVFDREGAMSAILPVLPYLPVSAEGSEGLNYDSRDGK 478

Query: 1384 RHGR 1373
            RHGR
Sbjct: 479  RHGR 482


>ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 540

 Score =  587 bits (1513), Expect = e-165
 Identities = 307/484 (63%), Positives = 361/484 (74%), Gaps = 2/484 (0%)
 Frame = -1

Query: 2818 MAGQRNNYGKRSHSHSDYADNGRNKRKN-TGDERESFSIGPEDSVYRYLCPXXXXXXXXX 2642
            M GQR++YGKRSHSHSD     +NKR+N   DE  S  I  +D+V+RYLCP         
Sbjct: 1    MTGQRSSYGKRSHSHSDSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVIG 60

Query: 2641 XXXXIVKQIRADSRSKIRIGETVSGCDERVVTIYSSSDETNDFDGTDNRVCPSQDALFRV 2462
                IVKQ+RAD+++KIRIG+ + GCDERVVTI+SSS+ETN FD TD+ V P+QDALFRV
Sbjct: 61   RGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETDDLVSPAQDALFRV 120

Query: 2461 FDRVIADDLTEDS-EEGAQVTVRLLVPSDXXXXXXXXXXXXXQSIRSDTGAQIRILKDDH 2285
              RVIA+D  ED  EE   VT +LLVPSD             Q+IRS+TGAQIRILKDD 
Sbjct: 121  HQRVIAEDAREDEDEERNHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDR 180

Query: 2284 LPPCALSSDELVQISGEAPVVRKALYQIASRLHDNPSRSQHMLISATPNAYASGGSLIGP 2105
            LPPCALS+DELVQISGEA VV+KAL+QIA+++ DNPSRSQH+L SA P  YA+GG    P
Sbjct: 181  LPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYATGG----P 236

Query: 2104 PGGAPIMGLTPLMGSSGEYKGESGDWSRSFYSASRDESSSKEFSLHMVCPTANXXXXXXX 1925
              GAPIMG+ P +G+ G YKG++GDWSRS Y A RDE+S +EFS+  VCPT N       
Sbjct: 237  GAGAPIMGVAPFVGAYGGYKGDTGDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVIGK 296

Query: 1924 XXXXINQIRQDSGAAIKVDSSAAAGDDCIIAISAKEFFEDTFSPTIEAALHLQPRCSEKV 1745
                INQIRQDSGA IKVDSSA  GDDC+I IS KEFFED+FSPTIEAA+ LQPRCSEKV
Sbjct: 297  GGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQPRCSEKV 356

Query: 1744 ERDSGLISFTTRLLVPTSRXXXXXXXXXXXITAMRNSTKANIRILSKENLPKVASEDDEM 1565
            ERDSG++SFTTRLLVPTSR           +T MR  TKANIRILSK+NLPK+ASEDDEM
Sbjct: 357  ERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKIASEDDEM 416

Query: 1564 VQISGDLDVAKEAFLQVTSRLRANLFEREGAVSAFVPVLPYLPMPADGPDGMKYESRDSR 1385
            VQISGDLDVAK+A +Q  +RLRANLF++E AVS F+PVLPYLP   DG DG+ Y+SRD +
Sbjct: 417  VQISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVLPYLPASVDGSDGLNYDSRDGK 476

Query: 1384 RHGR 1373
            RHGR
Sbjct: 477  RHGR 480


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