BLASTX nr result

ID: Panax21_contig00000252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000252
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   372   e-100
ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...   351   1e-94
ref|XP_002277861.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   348   9e-94
ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   345   8e-93
ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   343   4e-92

>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
            gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
            [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
            protein product [Vitis vinifera]
          Length = 251

 Score =  372 bits (954), Expect = e-100
 Identities = 188/237 (79%), Positives = 211/237 (89%)
 Frame = -2

Query: 1036 GLKPSTVKVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 857
            GL+PSTV++SS+    + GGL  +SFRSL           PKYTSLKPLGDRVLVKIKT 
Sbjct: 17   GLRPSTVRISSMGLPLKAGGLTQRSFRSLVVRAATVVT--PKYTSLKPLGDRVLVKIKTA 74

Query: 856  EEKTTGGILLPTTAQSKPQGGEVAAVGEGRTVGQNKVAVSVETGTQVVYSKYAGTEVEFN 677
            EEKT GGILLPTTAQ+KPQGGEV AVGEG+T+G+NK+ + V+TG QVVYSKYAGTEVEFN
Sbjct: 75   EEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDICVKTGAQVVYSKYAGTEVEFN 134

Query: 676  GFNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLLTEASKEKPSIGT 497
            G NHLILKEDDI+GIL+TDDVKDLKPLNDRVLIKVAEAEEKT+GGLLLTEASKEKPSIGT
Sbjct: 135  GSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEASKEKPSIGT 194

Query: 496  VIAVGPGPLDEEGKRKSLSISPGNTVMYSKYAGNDFKGTDGSDYIALRASDVMAVLS 326
            V+AVGPGPLDE+GKRK LS+SPGNTV+YSKYAGNDFKG+DGSDYIAL+ASD+MAVLS
Sbjct: 195  VVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDGSDYIALKASDIMAVLS 251


>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
            gi|223544718|gb|EEF46234.1| groes chaperonin, putative
            [Ricinus communis]
          Length = 253

 Score =  351 bits (901), Expect = 1e-94
 Identities = 177/237 (74%), Positives = 207/237 (87%)
 Frame = -2

Query: 1036 GLKPSTVKVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 857
            GL+PSTVK +S+    + GGL  +SFRSL           PKYTS+KPLGDRVL+KIK  
Sbjct: 23   GLRPSTVKFASL----KAGGLSQRSFRSLVVKAATVVA--PKYTSIKPLGDRVLLKIKVA 76

Query: 856  EEKTTGGILLPTTAQSKPQGGEVAAVGEGRTVGQNKVAVSVETGTQVVYSKYAGTEVEFN 677
            EEKT GGILLPT+AQ+KPQGGEV AVGEGRT+G+NK+ +SV+TG QVVYSKYAGTEVEFN
Sbjct: 77   EEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKTGAQVVYSKYAGTEVEFN 136

Query: 676  GFNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLLTEASKEKPSIGT 497
            G +HLILKEDDI+G+L+TDD+KDLKPLNDRV IK+A+AEEKT+GGLLLTEA+KEKPSIGT
Sbjct: 137  GSSHLILKEDDIVGVLETDDIKDLKPLNDRVFIKIADAEEKTAGGLLLTEATKEKPSIGT 196

Query: 496  VIAVGPGPLDEEGKRKSLSISPGNTVMYSKYAGNDFKGTDGSDYIALRASDVMAVLS 326
            VIAVGPG LDEEG R+ LS+SPGN+V+YSKYAGNDFKG+DG++YIALRASDVMAVLS
Sbjct: 197  VIAVGPGTLDEEGNRRPLSVSPGNSVLYSKYAGNDFKGSDGTNYIALRASDVMAVLS 253


>ref|XP_002277861.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
            gi|297734211|emb|CBI15458.3| unnamed protein product
            [Vitis vinifera]
          Length = 251

 Score =  348 bits (894), Expect = 9e-94
 Identities = 182/237 (76%), Positives = 201/237 (84%)
 Frame = -2

Query: 1036 GLKPSTVKVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 857
            GL+PSTV+V  V    +  GL  +  R L           PKYTSLKPL DRVLVKIKTV
Sbjct: 17   GLRPSTVRVPLVRLPLRAAGLTQRPVRGLVVRAATSIG--PKYTSLKPLADRVLVKIKTV 74

Query: 856  EEKTTGGILLPTTAQSKPQGGEVAAVGEGRTVGQNKVAVSVETGTQVVYSKYAGTEVEFN 677
            EEKT GGILLPTTAQ+KPQGGEV AVGEGRTVG+NKV + V+TGT VVYSKYAGTE+EFN
Sbjct: 75   EEKTGGGILLPTTAQTKPQGGEVVAVGEGRTVGKNKVDIGVKTGTSVVYSKYAGTELEFN 134

Query: 676  GFNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLLTEASKEKPSIGT 497
            G NHLILKEDDI+GIL+TDD+KDLKPLNDRVLIKVA AEEKT+GGLLLTEA+KEKPSIGT
Sbjct: 135  GSNHLILKEDDIVGILETDDIKDLKPLNDRVLIKVAVAEEKTAGGLLLTEATKEKPSIGT 194

Query: 496  VIAVGPGPLDEEGKRKSLSISPGNTVMYSKYAGNDFKGTDGSDYIALRASDVMAVLS 326
            VIAVGPG LD EG RK LS+SPG+T+MYSKYAGN+FKG+DGSDYIALRASDVMAVLS
Sbjct: 195  VIAVGPGSLDGEGNRKPLSLSPGSTIMYSKYAGNEFKGSDGSDYIALRASDVMAVLS 251


>ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
            gi|255647873|gb|ACU24395.1| unknown [Glycine max]
          Length = 253

 Score =  345 bits (886), Expect = 8e-93
 Identities = 175/237 (73%), Positives = 200/237 (84%)
 Frame = -2

Query: 1036 GLKPSTVKVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 857
            GL+PS V+ +S    R +G L  +SFR L           PKYT++KPLGDRVL+KIK  
Sbjct: 20   GLRPSAVQFASTGRIR-IGNLSQRSFRGLVVKAATVVA--PKYTAIKPLGDRVLIKIKEA 76

Query: 856  EEKTTGGILLPTTAQSKPQGGEVAAVGEGRTVGQNKVAVSVETGTQVVYSKYAGTEVEFN 677
            EEKT GGILLP+TAQ+KPQGGEV AVGEG+TVG+N V +SV+TG QVVYSKYAGTEV+FN
Sbjct: 77   EEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISVKTGAQVVYSKYAGTEVDFN 136

Query: 676  GFNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLLTEASKEKPSIGT 497
            G  HLI+K+DDI+GIL+TDD+KDLKPLNDRVLIKVAEAEEKTSGGLLLTEA+K+KPSIGT
Sbjct: 137  GTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTSGGLLLTEATKDKPSIGT 196

Query: 496  VIAVGPGPLDEEGKRKSLSISPGNTVMYSKYAGNDFKGTDGSDYIALRASDVMAVLS 326
            VIAVGPG LDEEG RK LS++PGNTV+YSKYAGNDFKG DGSDYI LR SDVMAVLS
Sbjct: 197  VIAVGPGHLDEEGNRKPLSVTPGNTVLYSKYAGNDFKGKDGSDYITLRVSDVMAVLS 253


>ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
            sativus] gi|449521557|ref|XP_004167796.1| PREDICTED: 20
            kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
            sativus]
          Length = 256

 Score =  343 bits (880), Expect = 4e-92
 Identities = 180/238 (75%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1036 GLKPSTVKVS-SVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKT 860
            GL+PS+VK S SV+H R VGGL  +SF  L           PKYTS+KPLGDRVLVKIK 
Sbjct: 22   GLRPSSVKFSPSVAHAR-VGGLANRSFTGLVVRAATVVA--PKYTSIKPLGDRVLVKIKE 78

Query: 859  VEEKTTGGILLPTTAQSKPQGGEVAAVGEGRTVGQNKVAVSVETGTQVVYSKYAGTEVEF 680
             EEKT GGILLP+TAQ++PQGGEV AVGEG+T+G  KV  SV+TG QVVYSKYAGTE+EF
Sbjct: 79   AEEKTDGGILLPSTAQTRPQGGEVVAVGEGKTIGNTKVEASVKTGAQVVYSKYAGTELEF 138

Query: 679  NGFNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLLTEASKEKPSIG 500
            NG NHLILKEDDI+GIL+TDD KDL+PLNDRVLIKVAEAEEKT+GGLLLTE SKEKPSIG
Sbjct: 139  NGSNHLILKEDDIVGILETDDAKDLQPLNDRVLIKVAEAEEKTAGGLLLTEGSKEKPSIG 198

Query: 499  TVIAVGPGPLDEEGKRKSLSISPGNTVMYSKYAGNDFKGTDGSDYIALRASDVMAVLS 326
            TVIAVGPG LDEEGKRK L+++ GN VMYSKYAGN+FKG DGSDYIALRASD++AVLS
Sbjct: 199  TVIAVGPGHLDEEGKRKPLTVAVGNNVMYSKYAGNEFKGKDGSDYIALRASDLIAVLS 256


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