BLASTX nr result

ID: Panax21_contig00000251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000251
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   251   4e-65
ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...   238   3e-61
ref|XP_002277861.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   237   9e-61
ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   234   7e-60
ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   233   9e-60

>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score =  251 bits (641), Expect = 4e-65
 Identities = 130/168 (77%), Positives = 144/168 (85%)
 Frame = -2

Query: 506 GLKPSTVQVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 327
           GL+PSTV++SS+    + GGL  +SFRSL           PKYTSLKPLGDRVLVKIKT 
Sbjct: 17  GLRPSTVRISSMGLPLKAGGLTQRSFRSLVVRAATVVT--PKYTSLKPLGDRVLVKIKTA 74

Query: 326 EEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNKVDVSVKTGTQVVYSKYAGTEVEFN 147
           EEKT GGILLPTTAQ+KPQ GEVVAVGEG+T+G NK+D+ VKTG QVVYSKYAGTEVEFN
Sbjct: 75  EEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDICVKTGAQVVYSKYAGTEVEFN 134

Query: 146 GSNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLL 3
           GSNHLILKEDDI+GIL+TDDVKDLKPLNDRVLIKVAEAEEKT+GGLLL
Sbjct: 135 GSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLL 182



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
 Frame = -2

Query: 371 LKPLGDRVLVKIKTVEEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNK-VDVSVKTG 195
           LKPL DRVL+K+   EEKT GG+LL   ++ KP  G VVAVG G      K   +SV  G
Sbjct: 158 LKPLNDRVLIKVAEAEEKTAGGLLLTEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPG 217

Query: 194 TQVVYSKYAGTEVE-FNGSNHLILKEDDIIGIL 99
             V+YSKYAG + +  +GS+++ LK  DI+ +L
Sbjct: 218 NTVLYSKYAGNDFKGSDGSDYIALKASDIMAVL 250


>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/168 (72%), Positives = 142/168 (84%)
 Frame = -2

Query: 506 GLKPSTVQVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 327
           GL+PSTV+ +S+    + GGL  +SFRSL           PKYTS+KPLGDRVL+KIK  
Sbjct: 23  GLRPSTVKFASL----KAGGLSQRSFRSLVVKAATVVA--PKYTSIKPLGDRVLLKIKVA 76

Query: 326 EEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNKVDVSVKTGTQVVYSKYAGTEVEFN 147
           EEKT GGILLPT+AQ+KPQ GEVVAVGEGRT+G NK+D+SVKTG QVVYSKYAGTEVEFN
Sbjct: 77  EEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKTGAQVVYSKYAGTEVEFN 136

Query: 146 GSNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLL 3
           GS+HLILKEDDI+G+L+TDD+KDLKPLNDRV IK+A+AEEKT+GGLLL
Sbjct: 137 GSSHLILKEDDIVGVLETDDIKDLKPLNDRVFIKIADAEEKTAGGLLL 184



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
 Frame = -2

Query: 371 LKPLGDRVLVKIKTVEEKTTGGILLPTTAQSKPQDGEVVAVGEGR-TVGSNKVDVSVKTG 195
           LKPL DRV +KI   EEKT GG+LL    + KP  G V+AVG G      N+  +SV  G
Sbjct: 160 LKPLNDRVFIKIADAEEKTAGGLLLTEATKEKPSIGTVIAVGPGTLDEEGNRRPLSVSPG 219

Query: 194 TQVVYSKYAGTEVE-FNGSNHLILKEDDIIGIL 99
             V+YSKYAG + +  +G+N++ L+  D++ +L
Sbjct: 220 NSVLYSKYAGNDFKGSDGTNYIALRASDVMAVL 252


>ref|XP_002277861.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|297734211|emb|CBI15458.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  237 bits (604), Expect = 9e-61
 Identities = 126/168 (75%), Positives = 137/168 (81%)
 Frame = -2

Query: 506 GLKPSTVQVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 327
           GL+PSTV+V  V    +  GL  +  R L           PKYTSLKPL DRVLVKIKTV
Sbjct: 17  GLRPSTVRVPLVRLPLRAAGLTQRPVRGLVVRAATSIG--PKYTSLKPLADRVLVKIKTV 74

Query: 326 EEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNKVDVSVKTGTQVVYSKYAGTEVEFN 147
           EEKT GGILLPTTAQ+KPQ GEVVAVGEGRTVG NKVD+ VKTGT VVYSKYAGTE+EFN
Sbjct: 75  EEKTGGGILLPTTAQTKPQGGEVVAVGEGRTVGKNKVDIGVKTGTSVVYSKYAGTELEFN 134

Query: 146 GSNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLL 3
           GSNHLILKEDDI+GIL+TDD+KDLKPLNDRVLIKVA AEEKT+GGLLL
Sbjct: 135 GSNHLILKEDDIVGILETDDIKDLKPLNDRVLIKVAVAEEKTAGGLLL 182



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = -2

Query: 371 LKPLGDRVLVKIKTVEEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVG-SNKVDVSVKTG 195
           LKPL DRVL+K+   EEKT GG+LL    + KP  G V+AVG G   G  N+  +S+  G
Sbjct: 158 LKPLNDRVLIKVAVAEEKTAGGLLLTEATKEKPSIGTVIAVGPGSLDGEGNRKPLSLSPG 217

Query: 194 TQVVYSKYAGTEVE-FNGSNHLILKEDDIIGIL 99
           + ++YSKYAG E +  +GS+++ L+  D++ +L
Sbjct: 218 STIMYSKYAGNEFKGSDGSDYIALRASDVMAVL 250


>ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
           sativus] gi|449521557|ref|XP_004167796.1| PREDICTED: 20
           kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
           sativus]
          Length = 256

 Score =  234 bits (596), Expect = 7e-60
 Identities = 124/169 (73%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
 Frame = -2

Query: 506 GLKPSTVQVS-SVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKT 330
           GL+PS+V+ S SV+H R VGGL  +SF  L           PKYTS+KPLGDRVLVKIK 
Sbjct: 22  GLRPSSVKFSPSVAHAR-VGGLANRSFTGLVVRAATVVA--PKYTSIKPLGDRVLVKIKE 78

Query: 329 VEEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNKVDVSVKTGTQVVYSKYAGTEVEF 150
            EEKT GGILLP+TAQ++PQ GEVVAVGEG+T+G+ KV+ SVKTG QVVYSKYAGTE+EF
Sbjct: 79  AEEKTDGGILLPSTAQTRPQGGEVVAVGEGKTIGNTKVEASVKTGAQVVYSKYAGTELEF 138

Query: 149 NGSNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLL 3
           NGSNHLILKEDDI+GIL+TDD KDL+PLNDRVLIKVAEAEEKT+GGLLL
Sbjct: 139 NGSNHLILKEDDIVGILETDDAKDLQPLNDRVLIKVAEAEEKTAGGLLL 187



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
 Frame = -2

Query: 371 LKPLGDRVLVKIKTVEEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNK-VDVSVKTG 195
           L+PL DRVL+K+   EEKT GG+LL   ++ KP  G V+AVG G      K   ++V  G
Sbjct: 163 LQPLNDRVLIKVAEAEEKTAGGLLLTEGSKEKPSIGTVIAVGPGHLDEEGKRKPLTVAVG 222

Query: 194 TQVVYSKYAGTEVE-FNGSNHLILKEDDIIGIL 99
             V+YSKYAG E +  +GS+++ L+  D+I +L
Sbjct: 223 NNVMYSKYAGNEFKGKDGSDYIALRASDLIAVL 255


>ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
           gi|255647873|gb|ACU24395.1| unknown [Glycine max]
          Length = 253

 Score =  233 bits (595), Expect = 9e-60
 Identities = 119/168 (70%), Positives = 138/168 (82%)
 Frame = -2

Query: 506 GLKPSTVQVSSVSHFRQVGGLGLKSFRSLXXXXXXXXXXAPKYTSLKPLGDRVLVKIKTV 327
           GL+PS VQ +S    R +G L  +SFR L           PKYT++KPLGDRVL+KIK  
Sbjct: 20  GLRPSAVQFASTGRIR-IGNLSQRSFRGLVVKAATVVA--PKYTAIKPLGDRVLIKIKEA 76

Query: 326 EEKTTGGILLPTTAQSKPQDGEVVAVGEGRTVGSNKVDVSVKTGTQVVYSKYAGTEVEFN 147
           EEKT GGILLP+TAQ+KPQ GEVVAVGEG+TVG N V++SVKTG QVVYSKYAGTEV+FN
Sbjct: 77  EEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISVKTGAQVVYSKYAGTEVDFN 136

Query: 146 GSNHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTSGGLLL 3
           G+ HLI+K+DDI+GIL+TDD+KDLKPLNDRVLIKVAEAEEKTSGGLLL
Sbjct: 137 GTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTSGGLLL 184



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = -2

Query: 371 LKPLGDRVLVKIKTVEEKTTGGILLPTTAQSKPQDGEVVAVGEGR-TVGSNKVDVSVKTG 195
           LKPL DRVL+K+   EEKT+GG+LL    + KP  G V+AVG G      N+  +SV  G
Sbjct: 160 LKPLNDRVLIKVAEAEEKTSGGLLLTEATKDKPSIGTVIAVGPGHLDEEGNRKPLSVTPG 219

Query: 194 TQVVYSKYAGTEVE-FNGSNHLILKEDDIIGIL 99
             V+YSKYAG + +  +GS+++ L+  D++ +L
Sbjct: 220 NTVLYSKYAGNDFKGKDGSDYITLRVSDVMAVL 252


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