BLASTX nr result

ID: Panax21_contig00000238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000238
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327058.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71
ref|XP_002511604.1| Protein-tyrosine phosphatase mitochondrial 1...   271   1e-70
ref|XP_002303366.1| predicted protein [Populus trichocarpa] gi|2...   261   1e-67
gb|ABK95576.1| unknown [Populus trichocarpa]                          249   7e-64
ref|XP_002326465.1| predicted protein [Populus trichocarpa] gi|2...   248   9e-64

>ref|XP_002327058.1| predicted protein [Populus trichocarpa] gi|222835373|gb|EEE73808.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  273 bits (698), Expect = 4e-71
 Identities = 146/223 (65%), Positives = 169/223 (75%), Gaps = 7/223 (3%)
 Frame = -1

Query: 848 VSTSLYDAHNIKHLVIPTRDYLFAPSYSDICQAVDFIHENASCGKTTYVHCKAGRGRSTT 669
           V TSLY AH+I HLVIPTRDYLFAP +SDICQAVDFIHENAS GKTTYVHCKAGRGRSTT
Sbjct: 97  VPTSLYHAHDIDHLVIPTRDYLFAPLFSDICQAVDFIHENASLGKTTYVHCKAGRGRSTT 156

Query: 668 VVLCYLVEHKHMTPDAAYEYVRSIRPRVRLASSQWQAVRDYYHCRMESNFCTG-ISSYKT 492
           +VLCYLVEH+HMTP +AYE+VRSIRPRV LASSQWQAV+DYY  +++     G +   K 
Sbjct: 157 IVLCYLVEHRHMTPKSAYEHVRSIRPRVLLASSQWQAVQDYYLLKVKKITIPGCMIIQKA 216

Query: 491 VGFP----AKLDLEPFDDGSVVLVTESDLDGYNESLDSGVACN-MLAELSVACRVQFASQ 327
           +  P     K D   FDDGS VLVTESDLDGY+ +   GV  N ML E S+AC+VQFASQ
Sbjct: 217 LDLPTKEDGKQDTAAFDDGSAVLVTESDLDGYDATCALGVVGNDMLREPSLACKVQFASQ 276

Query: 326 ATIARISCIWLRCHA-HKLSRKKLGSSVGSDQLGSIGVDMQVC 201
           A I+R+SC+WL      K S KKL SS+ + QL SI VD++VC
Sbjct: 277 AAISRLSCLWLGYQPDQKSSTKKLRSSIRASQLSSITVDIRVC 319


>ref|XP_002511604.1| Protein-tyrosine phosphatase mitochondrial 1, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548784|gb|EEF50273.1| Protein-tyrosine phosphatase
           mitochondrial 1, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 324

 Score =  271 bits (694), Expect = 1e-70
 Identities = 145/221 (65%), Positives = 170/221 (76%), Gaps = 6/221 (2%)
 Frame = -1

Query: 848 VSTSLYDAHNIKHLVIPTRDYLFAPSYSDICQAVDFIHENASCGKTTYVHCKAGRGRSTT 669
           V TSLY AHNI HLVIPTRDYLFAPS++DICQAVDFIHENAS GKTTYVHCKAGRGRSTT
Sbjct: 104 VPTSLYHAHNIVHLVIPTRDYLFAPSFADICQAVDFIHENASLGKTTYVHCKAGRGRSTT 163

Query: 668 VVLCYLVEHKHMTPDAAYEYVRSIRPRVRLASSQWQAVRDYYHCRMESNFCTGISSYKTV 489
           +VLCYLV H+HMTPDAAY+YVRSIRPRV LA SQ QAV+DYY  +++     G  + KT 
Sbjct: 164 IVLCYLVHHQHMTPDAAYKYVRSIRPRVLLAPSQRQAVQDYY-LKVKKTGNPGWIAKKTS 222

Query: 488 GF----PAKLDLEPFDDGSVVLVTESDLDGYNESLDSGVACN-MLAELSVACRVQFASQA 324
            +      K DL   +DGS V+VT+SDLDGY+   +S V  N +L ELS+ CRVQFASQ 
Sbjct: 223 NYLIEEEVKQDLAMSEDGSFVVVTKSDLDGYDVGRESIVGNNKILGELSLVCRVQFASQV 282

Query: 323 TIARISCIWLRCHAH-KLSRKKLGSSVGSDQLGSIGVDMQV 204
            I+R+SC+WL CHA+ K SRK+L  S G DQL S+ VD+QV
Sbjct: 283 AISRLSCLWLGCHANQKSSRKELEGSAGDDQLRSLTVDIQV 323


>ref|XP_002303366.1| predicted protein [Populus trichocarpa] gi|222840798|gb|EEE78345.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  261 bits (667), Expect = 1e-67
 Identities = 135/225 (60%), Positives = 167/225 (74%), Gaps = 10/225 (4%)
 Frame = -1

Query: 848 VSTSLYDAHNIKHLVIPTRDYLFAPSYSDICQAVDFIHENASCGKTTYVHCKAGRGRSTT 669
           V TSLY A+ I HLVIPTRDY FAPS +DICQAV FIHEN S G+TTYVHCKAGRGRSTT
Sbjct: 79  VPTSLYHAYGIDHLVIPTRDYCFAPSLNDICQAVAFIHENVSSGRTTYVHCKAGRGRSTT 138

Query: 668 VVLCYLVEHKHMTPDAAYEYVRSIRPRVRLASSQWQAVRDYYHCRMES---NFCTGISSY 498
           +V+CYLV H  MTP+AAY YVRSIRPRV LAS+QWQAV++YY+ ++++   NF      +
Sbjct: 139 IVICYLVHHMQMTPNAAYNYVRSIRPRVLLASAQWQAVQEYYYLKVDTSDHNFKLADLVF 198

Query: 497 KTVGFPAKLDLEPFDDGSVVLVTESDLDGYNESLDSG-VACNMLAELSVACRVQFASQAT 321
           +T        + PFDDGSVV+VTE+DLDGYN S++SG V   + A+LSV CRV+ A QA 
Sbjct: 199 RTPRPALLQGIVPFDDGSVVVVTEADLDGYNPSIESGPVGSEIWADLSVVCRVRVAGQAA 258

Query: 320 IARISCIWLRCHAH------KLSRKKLGSSVGSDQLGSIGVDMQV 204
           +ARISC+WLRC AH      +L+RK    S+ +D LG+I VD+ V
Sbjct: 259 LARISCLWLRCQAHQKIVGEQLNRKN-SCSIRADHLGAISVDIHV 302


>gb|ABK95576.1| unknown [Populus trichocarpa]
          Length = 334

 Score =  249 bits (635), Expect = 7e-64
 Identities = 130/225 (57%), Positives = 164/225 (72%), Gaps = 10/225 (4%)
 Frame = -1

Query: 848 VSTSLYDAHNIKHLVIPTRDYLFAPSYSDICQAVDFIHENASCGKTTYVHCKAGRGRSTT 669
           V TSLY A+ I HLV+PTRDY FAPS +DI QAV FIHEN S G+TTYVHCKAGRGRSTT
Sbjct: 110 VPTSLYHAYGIDHLVLPTRDYCFAPSLNDISQAVAFIHENVSSGQTTYVHCKAGRGRSTT 169

Query: 668 VVLCYLVEHKHMTPDAAYEYVRSIRPRVRLASSQWQAVRDYYHCRMESNFCTGISSYKTV 489
           +V+CYLV HK MTP+AAY+Y+RSIRPRV LAS+QW+AV++YYH ++ ++      +   +
Sbjct: 170 IVICYLVHHKQMTPEAAYKYLRSIRPRVLLASAQWKAVKEYYHLKVNTSDHNIKMTDIVL 229

Query: 488 GFPAKL---DLEPFDDGSVVLVTESDLDGYNESLDSG-VACNMLAELSVACRVQFASQAT 321
           G P      DL PFDDG VV+VTE+DLDGY  +L+SG V   + A+LSV CRV+ ASQA 
Sbjct: 230 GSPKPALLQDLVPFDDGCVVVVTEADLDGYKPNLESGPVGSEIWADLSVVCRVRVASQAA 289

Query: 320 IARISCIWLRCHAH------KLSRKKLGSSVGSDQLGSIGVDMQV 204
           + RISC+WLR   H      +L+RK    S+ +D LG+I VD+ V
Sbjct: 290 LERISCLWLRSQTHQKIVGEQLNRKN-SCSIMADHLGAISVDIHV 333


>ref|XP_002326465.1| predicted protein [Populus trichocarpa] gi|222833787|gb|EEE72264.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  248 bits (634), Expect = 9e-64
 Identities = 130/225 (57%), Positives = 164/225 (72%), Gaps = 10/225 (4%)
 Frame = -1

Query: 848 VSTSLYDAHNIKHLVIPTRDYLFAPSYSDICQAVDFIHENASCGKTTYVHCKAGRGRSTT 669
           V TSLY A+ I HLV+PTRDY FAPS +DI QAV FIHEN S G+TTYVHCKAGRGRSTT
Sbjct: 110 VPTSLYHAYGIDHLVLPTRDYCFAPSLNDISQAVAFIHENVSSGQTTYVHCKAGRGRSTT 169

Query: 668 VVLCYLVEHKHMTPDAAYEYVRSIRPRVRLASSQWQAVRDYYHCRMESNFCTGISSYKTV 489
           +V+CYLV HK MTP+AAY+Y+RSIRPRV LAS+QW+AV++YYH ++ ++      +   +
Sbjct: 170 IVICYLVHHKQMTPEAAYKYLRSIRPRVLLASAQWKAVQEYYHLKVNTSDHNIKMTDIVL 229

Query: 488 GFPAKL---DLEPFDDGSVVLVTESDLDGYNESLDSG-VACNMLAELSVACRVQFASQAT 321
           G P      DL PFDDG VV+VTE+DLDGY  +L+SG V   + A+LSV CRV+ ASQA 
Sbjct: 230 GSPKPALLQDLVPFDDGCVVVVTEADLDGYKPNLESGPVGSEIWADLSVVCRVRVASQAA 289

Query: 320 IARISCIWLRCHAH------KLSRKKLGSSVGSDQLGSIGVDMQV 204
           + RISC+WLR   H      +L+RK    S+ +D LG+I VD+ V
Sbjct: 290 LERISCLWLRSQTHQKIVGEQLNRKN-SCSIMADHLGAISVDIHV 333


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