BLASTX nr result

ID: Panax21_contig00000237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000237
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303366.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002511604.1| Protein-tyrosine phosphatase mitochondrial 1...    97   1e-18
ref|XP_002327058.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002326465.1| predicted protein [Populus trichocarpa] gi|2...    91   9e-17
gb|ABK95576.1| unknown [Populus trichocarpa]                           91   9e-17

>ref|XP_002303366.1| predicted protein [Populus trichocarpa] gi|222840798|gb|EEE78345.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  100 bits (250), Expect = 1e-19
 Identities = 58/125 (46%), Positives = 79/125 (63%), Gaps = 10/125 (8%)
 Frame = -2

Query: 541 YYHCRMES---NFCTGSSSYKTVGFPAKLDIEPFDDGSVVLVTESDLDGYNESLDSG-VA 374
           YY+ ++++   NF      ++T        I PFDDGSVV+VTE+DLDGYN S++SG V 
Sbjct: 179 YYYLKVDTSDHNFKLADLVFRTPRPALLQGIVPFDDGSVVVVTEADLDGYNPSIESGPVG 238

Query: 373 CNMLAELSVACRVQFASQATIARISCFWLHCHAH------KLSRKKLGSSVGSDQLGSIG 212
             + A+LSV CRV+ A QA +ARISC WL C AH      +L+RK    S+ +D LG+I 
Sbjct: 239 SEIWADLSVVCRVRVAGQAALARISCLWLRCQAHQKIVGEQLNRKN-SCSIRADHLGAIS 297

Query: 211 VDMQV 197
           VD+ V
Sbjct: 298 VDIHV 302


>ref|XP_002511604.1| Protein-tyrosine phosphatase mitochondrial 1, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548784|gb|EEF50273.1| Protein-tyrosine phosphatase
           mitochondrial 1, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 324

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = -2

Query: 469 KLDIEPFDDGSVVLVTESDLDGYNESLDSGVACN-MLAELSVACRVQFASQATIARISCF 293
           K D+   +DGS V+VT+SDLDGY+   +S V  N +L ELS+ CRVQFASQ  I+R+SC 
Sbjct: 231 KQDLAMSEDGSFVVVTKSDLDGYDVGRESIVGNNKILGELSLVCRVQFASQVAISRLSCL 290

Query: 292 WLHCHAH-KLSRKKLGSSVGSDQLGSIGVDMQV 197
           WL CHA+ K SRK+L  S G DQL S+ VD+QV
Sbjct: 291 WLGCHANQKSSRKELEGSAGDDQLRSLTVDIQV 323


>ref|XP_002327058.1| predicted protein [Populus trichocarpa] gi|222835373|gb|EEE73808.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 55/94 (58%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
 Frame = -2

Query: 469 KLDIEPFDDGSVVLVTESDLDGYNESLDSGVACN-MLAELSVACRVQFASQATIARISCF 293
           K D   FDDGS VLVTESDLDGY+ +   GV  N ML E S+AC+VQFASQA I+R+SC 
Sbjct: 226 KQDTAAFDDGSAVLVTESDLDGYDATCALGVVGNDMLREPSLACKVQFASQAAISRLSCL 285

Query: 292 WL-HCHAHKLSRKKLGSSVGSDQLGSIGVDMQVC 194
           WL +    K S KKL SS+ + QL SI VD++VC
Sbjct: 286 WLGYQPDQKSSTKKLRSSIRASQLSSITVDIRVC 319


>ref|XP_002326465.1| predicted protein [Populus trichocarpa] gi|222833787|gb|EEE72264.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 10/125 (8%)
 Frame = -2

Query: 541 YYHCRMESNFCTGSSSYKTVGFPAKL---DIEPFDDGSVVLVTESDLDGYNESLDSG-VA 374
           YYH ++ ++      +   +G P      D+ PFDDG VV+VTE+DLDGY  +L+SG V 
Sbjct: 210 YYHLKVNTSDHNIKMTDIVLGSPKPALLQDLVPFDDGCVVVVTEADLDGYKPNLESGPVG 269

Query: 373 CNMLAELSVACRVQFASQATIARISCFWLHCHAH------KLSRKKLGSSVGSDQLGSIG 212
             + A+LSV CRV+ ASQA + RISC WL    H      +L+RK    S+ +D LG+I 
Sbjct: 270 SEIWADLSVVCRVRVASQAALERISCLWLRSQTHQKIVGEQLNRKN-SCSIMADHLGAIS 328

Query: 211 VDMQV 197
           VD+ V
Sbjct: 329 VDIHV 333


>gb|ABK95576.1| unknown [Populus trichocarpa]
          Length = 334

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 10/125 (8%)
 Frame = -2

Query: 541 YYHCRMESNFCTGSSSYKTVGFPAKL---DIEPFDDGSVVLVTESDLDGYNESLDSG-VA 374
           YYH ++ ++      +   +G P      D+ PFDDG VV+VTE+DLDGY  +L+SG V 
Sbjct: 210 YYHLKVNTSDHNIKMTDIVLGSPKPALLQDLVPFDDGCVVVVTEADLDGYKPNLESGPVG 269

Query: 373 CNMLAELSVACRVQFASQATIARISCFWLHCHAH------KLSRKKLGSSVGSDQLGSIG 212
             + A+LSV CRV+ ASQA + RISC WL    H      +L+RK    S+ +D LG+I 
Sbjct: 270 SEIWADLSVVCRVRVASQAALERISCLWLRSQTHQKIVGEQLNRKN-SCSIMADHLGAIS 328

Query: 211 VDMQV 197
           VD+ V
Sbjct: 329 VDIHV 333


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