BLASTX nr result

ID: Panax21_contig00000235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000235
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW93867.1| PR10-1, partial [Panax ginseng]                        244   2e-62
sp|P80889.1|RNS1_PANGI RecName: Full=Ribonuclease 1                   242   8e-62
gb|ADW93868.1| PR10-3, partial [Panax ginseng]                        185   1e-44
gb|ADW93869.1| PR10-2 [Panax ginseng]                                 173   3e-41
gb|ACY36943.1| pathogensis-related protein 10 [Panax ginseng]         173   3e-41

>gb|ADW93867.1| PR10-1, partial [Panax ginseng]
          Length = 155

 Score =  244 bits (622), Expect = 2e-62
 Identities = 132/155 (85%), Positives = 132/155 (85%)
 Frame = -1

Query: 677 MGVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEXXXXXXXXXXXXXG 498
           MGVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIE             G
Sbjct: 1   MGVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDGGVGTVKLVTLG 60

Query: 497 EASQFNTMKQRIDAIDKDALTYTYSXXXXXXXXXXIESIVNHFTIVPTPDGGSIVKNTTI 318
           EASQFNTMKQRIDAIDKDALTYTYS          IESIVNHFTIVPTPDGGSIVKNTTI
Sbjct: 61  EASQFNTMKQRIDAIDKDALTYTYSIIGGDILLDIIESIVNHFTIVPTPDGGSIVKNTTI 120

Query: 317 YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 213
           YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN
Sbjct: 121 YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 155


>sp|P80889.1|RNS1_PANGI RecName: Full=Ribonuclease 1
          Length = 154

 Score =  242 bits (617), Expect = 8e-62
 Identities = 131/154 (85%), Positives = 131/154 (85%)
 Frame = -1

Query: 674 GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEXXXXXXXXXXXXXGE 495
           GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIE             GE
Sbjct: 1   GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDGGVGTVKLVTLGE 60

Query: 494 ASQFNTMKQRIDAIDKDALTYTYSXXXXXXXXXXIESIVNHFTIVPTPDGGSIVKNTTIY 315
           ASQFNTMKQRIDAIDKDALTYTYS          IESIVNHFTIVPTPDGGSIVKNTTIY
Sbjct: 61  ASQFNTMKQRIDAIDKDALTYTYSIIGGDILLDIIESIVNHFTIVPTPDGGSIVKNTTIY 120

Query: 314 NTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 213
           NTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN
Sbjct: 121 NTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 154


>gb|ADW93868.1| PR10-3, partial [Panax ginseng]
          Length = 154

 Score =  185 bits (469), Expect = 1e-44
 Identities = 97/155 (62%), Positives = 117/155 (75%)
 Frame = -1

Query: 677 MGVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEXXXXXXXXXXXXXG 498
           MGVQKT+ EA S+VPA+KLY G  LD+D ++PKAFPQ IKS EI+E             G
Sbjct: 1   MGVQKTQAEAPSSVPAEKLYKGSFLDMDTVVPKAFPQGIKSIEILEGDGGVGTIKHITLG 60

Query: 497 EASQFNTMKQRIDAIDKDALTYTYSXXXXXXXXXXIESIVNHFTIVPTPDGGSIVKNTTI 318
           +A+ FN+MK RID IDKDALTY+Y+          IESI NHFT+VP  +GGSI+KNTTI
Sbjct: 61  DATPFNSMKTRIDGIDKDALTYSYTIIEGDLLLGIIESITNHFTVVPR-EGGSIMKNTTI 119

Query: 317 YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 213
           YNTIGDAVIPEEN+KDA++K+ L+FKAVEAYLLAN
Sbjct: 120 YNTIGDAVIPEENLKDASDKSTLLFKAVEAYLLAN 154


>gb|ADW93869.1| PR10-2 [Panax ginseng]
          Length = 154

 Score =  173 bits (439), Expect = 3e-41
 Identities = 92/155 (59%), Positives = 111/155 (71%)
 Frame = -1

Query: 677 MGVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEXXXXXXXXXXXXXG 498
           MGVQKTE +A S VPA+KL+ G  LD+D ++PKAFP+ IKS +++E             G
Sbjct: 1   MGVQKTETQAISPVPAEKLFKGSFLDMDTVVPKAFPEGIKSVQVLEGNGGVGTIKNVTLG 60

Query: 497 EASQFNTMKQRIDAIDKDALTYTYSXXXXXXXXXXIESIVNHFTIVPTPDGGSIVKNTTI 318
           +A+ FNTMK RIDAID+ A TYTY+          IESI NHF IVPT DGGS +  TTI
Sbjct: 61  DATPFNTMKTRIDAIDEHAFTYTYTIIGGDILLDIIESIENHFKIVPT-DGGSTITQTTI 119

Query: 317 YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 213
           YNTIGDAVIPEEN+KDATEK+  +FKAVEAY+LAN
Sbjct: 120 YNTIGDAVIPEENVKDATEKSIQLFKAVEAYILAN 154


>gb|ACY36943.1| pathogensis-related protein 10 [Panax ginseng]
          Length = 154

 Score =  173 bits (439), Expect = 3e-41
 Identities = 93/155 (60%), Positives = 111/155 (71%)
 Frame = -1

Query: 677 MGVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEXXXXXXXXXXXXXG 498
           MGVQKTE +A S VPA+KL+ G  LD+D ++PKAFP+ IKS +++E             G
Sbjct: 1   MGVQKTETQAISPVPAEKLFKGSFLDMDTVVPKAFPEGIKSVQVLEGNGGVGTIKNVTLG 60

Query: 497 EASQFNTMKQRIDAIDKDALTYTYSXXXXXXXXXXIESIVNHFTIVPTPDGGSIVKNTTI 318
           +A+ FNTMK RIDAID+ A TYTY+          IESI NHF IVPT DGGS +  TTI
Sbjct: 61  DATPFNTMKTRIDAIDEHAFTYTYTIIGGDILLDIIESIENHFKIVPT-DGGSTITQTTI 119

Query: 317 YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 213
           YNTIGDAVIPEENIKDAT+K+  +FKAVEAYLLAN
Sbjct: 120 YNTIGDAVIPEENIKDATDKSIQLFKAVEAYLLAN 154


Top