BLASTX nr result

ID: Panax21_contig00000227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000227
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|2...   467   e-129
ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...   461   e-128
ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex s...   461   e-128
ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex s...   461   e-128

>ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|222867894|gb|EEF05025.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  467 bits (1202), Expect = e-129
 Identities = 228/243 (93%), Positives = 237/243 (97%)
 Frame = -1

Query: 730 PPLISAVKRQLRIRTIYESKMLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHM 551
           PPLISAVKRQLRIRTIYESK+LEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVG HM
Sbjct: 171 PPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGGHM 230

Query: 550 QELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVLLTSYKRLVVKD 371
           QELRRVRSGI+GEKDNMVTMHDVMDAQWVYDN+RDESYLRRVIMPLEV+LTSYKRLVVKD
Sbjct: 231 QELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVILTSYKRLVVKD 290

Query: 370 SAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV 191
           SAVNAICYGAKLMIPGLLRFENDIE GEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVV
Sbjct: 291 SAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVV 350

Query: 190 AKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKLNENTPAEWTRNVVLPTGGD 11
           AKIKRVVMDRDTYPRKWGLGPKAS+KKKLI+EGKLDKHGK N+NTP EW RN+VLP GGD
Sbjct: 351 AKIKRVVMDRDTYPRKWGLGPKASIKKKLISEGKLDKHGKPNDNTPHEWARNLVLPAGGD 410

Query: 10  SMV 2
           SMV
Sbjct: 411 SMV 413


>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  466 bits (1200), Expect = e-129
 Identities = 229/243 (94%), Positives = 237/243 (97%)
 Frame = -1

Query: 730 PPLISAVKRQLRIRTIYESKMLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHM 551
           PPLISAVKRQLRIRTIYESK+LEYDAD+HLVVFWISCEAGTYVRTMCVHLGLILGVGAHM
Sbjct: 183 PPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLILGVGAHM 242

Query: 550 QELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVLLTSYKRLVVKD 371
           QELRRVRSGI+GEKDNMVTMHDVMDAQWVYDN+RDESYLRR IMPLEVLLTSYKRLVVKD
Sbjct: 243 QELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRAIMPLEVLLTSYKRLVVKD 302

Query: 370 SAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV 191
           SAVNAICYGAKLMIPGLLRFENDIE GEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV
Sbjct: 303 SAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV 362

Query: 190 AKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKLNENTPAEWTRNVVLPTGGD 11
           AKIKRVVMDRDTYPRKWGLGP+AS+KKKLI+EGKLDKHGK NENTP EW RN+VLP GGD
Sbjct: 363 AKIKRVVMDRDTYPRKWGLGPRASIKKKLISEGKLDKHGKPNENTPHEWMRNLVLPPGGD 422

Query: 10  SMV 2
           SMV
Sbjct: 423 SMV 425


>ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 4-like [Cucumis sativus]
          Length = 566

 Score =  461 bits (1185), Expect = e-128
 Identities = 225/243 (92%), Positives = 234/243 (96%)
 Frame = -1

Query: 730 PPLISAVKRQLRIRTIYESKMLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHM 551
           PPLISAVKRQLRIRTIYESK+LEYDADKHLVVFWISCEAGTYVRT+CVHLGLILGVG HM
Sbjct: 172 PPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHM 231

Query: 550 QELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVLLTSYKRLVVKD 371
           QELRRVRSGI+GEKDNMVTMHDVMDAQW YDNF+DESYLRRVIMPLEV+LTSYKRLVVKD
Sbjct: 232 QELRRVRSGILGEKDNMVTMHDVMDAQWFYDNFKDESYLRRVIMPLEVVLTSYKRLVVKD 291

Query: 370 SAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV 191
           SAVNAICYGAKLMIPGLLRFENDI  GEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVV
Sbjct: 292 SAVNAICYGAKLMIPGLLRFENDIGAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVV 351

Query: 190 AKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKLNENTPAEWTRNVVLPTGGD 11
           AKIKRVVMDRDTYPRKWGLGP+ASMKKKLI EGKLDKHGK NENTP EW RN+VLPTGGD
Sbjct: 352 AKIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWMRNLVLPTGGD 411

Query: 10  SMV 2
            +V
Sbjct: 412 VLV 414


>ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
           [Cucumis sativus]
          Length = 564

 Score =  461 bits (1185), Expect = e-128
 Identities = 225/243 (92%), Positives = 234/243 (96%)
 Frame = -1

Query: 730 PPLISAVKRQLRIRTIYESKMLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHM 551
           PPLISAVKRQLRIRTIYESK+LEYDADKHLVVFWISCEAGTYVRT+CVHLGLILGVG HM
Sbjct: 172 PPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHM 231

Query: 550 QELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVLLTSYKRLVVKD 371
           QELRRVRSGI+GEKDNMVTMHDVMDAQW YDNF+DESYLRRVIMPLEV+LTSYKRLVVKD
Sbjct: 232 QELRRVRSGILGEKDNMVTMHDVMDAQWFYDNFKDESYLRRVIMPLEVVLTSYKRLVVKD 291

Query: 370 SAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV 191
           SAVNAICYGAKLMIPGLLRFENDI  GEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVV
Sbjct: 292 SAVNAICYGAKLMIPGLLRFENDIGAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVV 351

Query: 190 AKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKLNENTPAEWTRNVVLPTGGD 11
           AKIKRVVMDRDTYPRKWGLGP+ASMKKKLI EGKLDKHGK NENTP EW RN+VLPTGGD
Sbjct: 352 AKIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWMRNLVLPTGGD 411

Query: 10  SMV 2
            +V
Sbjct: 412 VLV 414


>ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 555

 Score =  461 bits (1185), Expect = e-128
 Identities = 221/243 (90%), Positives = 237/243 (97%)
 Frame = -1

Query: 730 PPLISAVKRQLRIRTIYESKMLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHM 551
           PPLISAVKRQLRIRTIYESK+LEYD D+HLVVFWISCEAGTYVRTMCVHLGL+LGVG+HM
Sbjct: 148 PPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLLLGVGSHM 207

Query: 550 QELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVLLTSYKRLVVKD 371
           QELRRVRSGIMGEKDNMV+MHDVMDAQWVYDN+RDE+YLRRV+MPLE+LLTSYKRLVVKD
Sbjct: 208 QELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNYRDETYLRRVVMPLEILLTSYKRLVVKD 267

Query: 370 SAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVV 191
           SAVNAICYGAK MIPGLLRFENDI+VGEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVV
Sbjct: 268 SAVNAICYGAKFMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVV 327

Query: 190 AKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKLNENTPAEWTRNVVLPTGGD 11
           AKIKRVVMDRDTYPRKWGLGP+ASMKK+LI+EGKLDKHGK NE TP EW RN+VLPTGGD
Sbjct: 328 AKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGGD 387

Query: 10  SMV 2
           SM+
Sbjct: 388 SMI 390


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