BLASTX nr result

ID: Panax21_contig00000226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000226
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]    86   2e-35
ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vi...    86   2e-35
emb|CBI35792.3| unnamed protein product [Vitis vinifera]               86   2e-35
ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-32
ref|XP_002533819.1| Protein C14orf21, putative [Ricinus communis...    87   2e-30

>emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]
          Length = 1694

 Score = 85.5 bits (210), Expect(3) = 2e-35
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +1

Query: 187 ICGNALEETRGKEVELATDYIISHTLQILLEGCYVDHLCSFLRSCTR 327
           ICGNALEE RGKE+ELATDYIISHTLQ LLEGC VDHLC FL+SC +
Sbjct: 95  ICGNALEEARGKELELATDYIISHTLQALLEGCDVDHLCRFLQSCAK 141



 Score = 68.6 bits (166), Expect(3) = 2e-35
 Identities = 29/45 (64%), Positives = 42/45 (93%)
 Frame = +3

Query: 324 KDFSHISMDKSGSHVAESALKSLAIHLQDSETHSLIEDTLTSICQ 458
           KDF +I+MD+SGSHVAE+ALKSL++HLQD E+++L+E+TL +IC+
Sbjct: 141 KDFPYIAMDRSGSHVAETALKSLSLHLQDKESYTLVEETLATICK 185



 Score = 42.4 bits (98), Expect(3) = 2e-35
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 77  KTDSEPQTSFVRKHVDPETAKYFSEIAN 160
           K  SEP+T  +RK VDPE AKYFSEIAN
Sbjct: 53  KNTSEPKTYRLRKQVDPEMAKYFSEIAN 80


>ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vinifera]
          Length = 857

 Score = 85.5 bits (210), Expect(3) = 2e-35
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +1

Query: 187 ICGNALEETRGKEVELATDYIISHTLQILLEGCYVDHLCSFLRSCTR 327
           ICGNALEE RGKE+ELATDYIISHTLQ LLEGC VDHLC FL+SC +
Sbjct: 119 ICGNALEEARGKELELATDYIISHTLQALLEGCDVDHLCRFLQSCAK 165



 Score = 68.6 bits (166), Expect(3) = 2e-35
 Identities = 29/45 (64%), Positives = 42/45 (93%)
 Frame = +3

Query: 324 KDFSHISMDKSGSHVAESALKSLAIHLQDSETHSLIEDTLTSICQ 458
           KDF +I+MD+SGSHVAE+ALKSL++HLQD E+++L+E+TL +IC+
Sbjct: 165 KDFPYIAMDRSGSHVAETALKSLSLHLQDKESYTLVEETLATICK 209



 Score = 42.4 bits (98), Expect(3) = 2e-35
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 77  KTDSEPQTSFVRKHVDPETAKYFSEIAN 160
           K  SEP+T  +RK VDPE AKYFSEIAN
Sbjct: 77  KNTSEPKTYRLRKQVDPEMAKYFSEIAN 104


>emb|CBI35792.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score = 85.5 bits (210), Expect(3) = 2e-35
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +1

Query: 187 ICGNALEETRGKEVELATDYIISHTLQILLEGCYVDHLCSFLRSCTR 327
           ICGNALEE RGKE+ELATDYIISHTLQ LLEGC VDHLC FL+SC +
Sbjct: 95  ICGNALEEARGKELELATDYIISHTLQALLEGCDVDHLCRFLQSCAK 141



 Score = 68.6 bits (166), Expect(3) = 2e-35
 Identities = 29/45 (64%), Positives = 42/45 (93%)
 Frame = +3

Query: 324 KDFSHISMDKSGSHVAESALKSLAIHLQDSETHSLIEDTLTSICQ 458
           KDF +I+MD+SGSHVAE+ALKSL++HLQD E+++L+E+TL +IC+
Sbjct: 141 KDFPYIAMDRSGSHVAETALKSLSLHLQDKESYTLVEETLATICK 185



 Score = 42.4 bits (98), Expect(3) = 2e-35
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 77  KTDSEPQTSFVRKHVDPETAKYFSEIAN 160
           K  SEP+T  +RK VDPE AKYFSEIAN
Sbjct: 53  KNTSEPKTYRLRKQVDPEMAKYFSEIAN 80


>ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|222840765|gb|EEE78312.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score = 85.5 bits (210), Expect(3) = 3e-32
 Identities = 39/47 (82%), Positives = 40/47 (85%)
 Frame = +1

Query: 187 ICGNALEETRGKEVELATDYIISHTLQILLEGCYVDHLCSFLRSCTR 327
           ICGNALEE RGKE ELATDY ISHTLQILLEGC VDHLC FLR C +
Sbjct: 119 ICGNALEEARGKEFELATDYYISHTLQILLEGCNVDHLCDFLRGCAK 165



 Score = 67.0 bits (162), Expect(3) = 3e-32
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +3

Query: 324 KDFSHISMDKSGSHVAESALKSLAIHLQDSETHSLIEDTLTSICQ 458
           K F  ISMD+SGSHVAE+ALKSLA+HLQD E +S+IE+TLT+IC+
Sbjct: 165 KVFPLISMDRSGSHVAETALKSLAMHLQDDEAYSVIEETLTNICK 209



 Score = 33.5 bits (75), Expect(3) = 3e-32
 Identities = 18/27 (66%), Positives = 18/27 (66%)
 Frame = +2

Query: 80  TDSEPQTSFVRKHVDPETAKYFSEIAN 160
           T SEPQ S V    DPET KYFSEI N
Sbjct: 82  TFSEPQPSIV----DPETTKYFSEIVN 104


>ref|XP_002533819.1| Protein C14orf21, putative [Ricinus communis]
           gi|223526256|gb|EEF28572.1| Protein C14orf21, putative
           [Ricinus communis]
          Length = 663

 Score = 86.7 bits (213), Expect(3) = 2e-30
 Identities = 41/45 (91%), Positives = 41/45 (91%)
 Frame = +1

Query: 187 ICGNALEETRGKEVELATDYIISHTLQILLEGCYVDHLCSFLRSC 321
           ICGNALEE RGKE ELATDYIISHTLQ LLEGC VDHLCSFLRSC
Sbjct: 37  ICGNALEEARGKEYELATDYIISHTLQNLLEGCDVDHLCSFLRSC 81



 Score = 60.1 bits (144), Expect(3) = 2e-30
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 330 FSHISMDKSGSHVAESALKSLAIHLQDSETHSLIEDTLTSI 452
           F  I+MD+SGSHVAE+ALKSLA HLQD+E +S+IE+TLT I
Sbjct: 85  FPLIAMDRSGSHVAETALKSLATHLQDNEAYSIIEETLTVI 125



 Score = 32.7 bits (73), Expect(3) = 2e-30
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 110 RKHVDPETAKYFSEIAN 160
           RK VDPET +YFSEIAN
Sbjct: 6   RKQVDPETKQYFSEIAN 22


Top