BLASTX nr result
ID: Panax21_contig00000220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000220
(2306 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Popu... 74 2e-10
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-07
gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. ... 62 9e-07
ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago tru... 61 2e-06
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ... 61 2e-06
>gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
Length = 1139
Score = 73.9 bits (180), Expect = 2e-10
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Frame = +3
Query: 33 LTDCSRLVQVQGLENLNSLQYVLMAGCNNLEISTLKSFFQRYF--EHADEIILPRWEIPE 206
L +C +L +QGL ++ + + + C+ L + KS Q F EH D I L EIP+
Sbjct: 967 LVNCQQLSDIQGLGSVGNKPLIYVDNCSKLA-NNFKSLLQASFKGEHLD-ICLRDSEIPD 1024
Query: 207 WITDQRMKSSISFDMPLNPTNNFQGIILWVVYVKSDIYFDHPNYYSAVIKNKTSGITWIH 386
W + + SSISF + P + QG+I+W+V S+ P Y SA I+NK+ G+ H
Sbjct: 1025 WFSHRGDGSSISFYV---PDSEIQGLIVWIVCGASERRLPLP-YASATIRNKSKGVRLFH 1080
Query: 387 GRDVFK-HTFRVEGHSWV-----SCLKGDLSNEDTIEISINELENGVKVKRCGIQFLYK 545
+ + HSWV S L + + +E S+ ++ NGV V +CG+ + K
Sbjct: 1081 WSTFIPLYYSKPAYHSWVNYVTFSRLPCAMEGGEVVEHSV-KITNGVVVDKCGVHLISK 1138
>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
predicted protein [Populus trichocarpa]
Length = 451
Score = 63.2 bits (152), Expect = 3e-07
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Frame = +3
Query: 6 NLKYLFQLDLTDCSRLVQVQGLENLNSLQYVLMAGCNNLEISTLKSFFQRYFEHADEI-- 179
NL +L+L C RLVQVQGL NL ++ NL + ++S E + I
Sbjct: 208 NLLRSLRLNLIGCKRLVQVQGLFNLEMMREFDAKMIYNLHLFNIESLGSIEVEMINSITK 267
Query: 180 ------------------ILPRWEIPEWITDQRMKSSISFDMPLNPTNNFQGIILWVVYV 305
LP E+P W + Q+ +S+SF +P P+ +G+ L +VY
Sbjct: 268 TSRITRLQILQEQGIFSIFLPGSEVPSWYSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYG 327
Query: 306 KSDIYFDHPNYY--SAVIKNKTSGITWIHGRDVFKHTFRVEGHSWVSCLK---GDLSNED 470
+ Y A I NKT + W + V+ E W+S + L D
Sbjct: 328 LRNTDKKCATLYPPDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHWRFGTDQLEVGD 387
Query: 471 TIEISINELENGVKVKRCGIQFLYKPD 551
+ +S + + +VK+CG+ +Y+ +
Sbjct: 388 QVNVSAS-VTPDFQVKKCGVHLVYEQE 413
>gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1084
Score = 61.6 bits (148), Expect = 9e-07
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Frame = +3
Query: 18 LFQLDLTDCSRLVQVQGLENLNSLQYVLMAGCNNLEISTLKSFFQRYFEHAD-EIILPRW 194
L L LT+C LV+ GLE L ++ + M CNN+ S + Q + A+ + +P
Sbjct: 815 LQSLHLTNCYNLVETPGLEELKTVGVIHMEMCNNVPYSDRERIMQGWAVGANGGVFVPGS 874
Query: 195 EIPEWITDQRMKSSISFDMPLNPTNN--FQGIILWVVYVKSDIYFDHPNYYSAVIKNKTS 368
IP+W+ + SISF +P PT N G +W YV +KN+T
Sbjct: 875 TIPDWVNFKNGTRSISFTVP-EPTLNSVLVGFTVWTTYVSQQDDVMSAYIPKITLKNQTK 933
Query: 369 GITWIHGRDVFKHTFRVEGHSWVSCLKGDLSNEDTIEISINELENGV 509
W E H W +G SNED + + +E+E V
Sbjct: 934 VDVWSRNPATDLIRMYREKHIW----QGHFSNEDFVLETGDEVEVSV 976
>ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance
protein [Medicago truncatula]
Length = 1406
Score = 60.8 bits (146), Expect = 2e-06
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Frame = +3
Query: 3 SNLKYLFQLDLTDCSRLVQVQGLENLNSLQYVLMAGCNNLEISTLKSFFQRYFEHADEII 182
S+L+ L +L+LT+C ++ + GLE L SL+ + ++GCN K + + + +
Sbjct: 1121 SSLESLEELELTNCEKVADIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFENLS 1180
Query: 183 LPRWEIPEWITDQRMKSSISFDMPLNPTNNFQGIILWVVYVKSDIYFDHPNYYSAVIKNK 362
+P ++PEW + + ++SF +N + + L V V + +H N + + + +
Sbjct: 1181 MPGTKLPEWFSGE----TVSF-------SNRKNLELTSVVVGVVVSINH-NIHIPIKREE 1228
Query: 363 TSGITWIHGRDVFKH-------TFRVEG-----------------HSWVSCLKGDLSNED 470
GI + G+ VFKH T + G H V+ LK + D
Sbjct: 1229 MPGIIDVEGK-VFKHGKQKFGTTLNIRGVPRTNVDHIHLCRFQNYHQLVAFLK----DAD 1283
Query: 471 TIEISINE--LENGVKVKRCGIQFLYKPDISGVDRKRGRNVNLQLSNEESAKRLRT 632
T ++ + G+++K+CG+ +++ D + + LQ +E A+ T
Sbjct: 1284 TFCVTTRSPPFDKGLRLKKCGVYLIFEGDDDYDGDEESLDKGLQSVSERLARFFNT 1339
>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
gi|223543328|gb|EEF44860.1| TMV resistance protein N,
putative [Ricinus communis]
Length = 1186
Score = 60.8 bits (146), Expect = 2e-06
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Frame = +3
Query: 6 NLKYLFQLDLTDCSRLVQVQGLE-------------------NLNSLQYVLMAGCNNLEI 128
NL L++ C LV+VQGL NL SL+ V + N L
Sbjct: 908 NLLKSLNLEIFGCDSLVEVQGLFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALAC 967
Query: 129 STLKSFFQRYFEHAD-EIILPRWEIPEWITDQRMKSSISFDMPLNPTNNFQGIILWVVYV 305
+ +++ Q E I LP IPEW + SSISF++ P + +G+ L +Y
Sbjct: 968 TEMRTSIQVLQECGIFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGHKIKGLSLCTLYT 1027
Query: 306 KSDI----YFDHPNYYSAVIKNKTSGITWIHGRDVFKHTFRVEGHSWVS--CLKGDLSNE 467
+ Y D A I NKT W + + +E W+S L
Sbjct: 1028 YDKLEGGGYIDE---NCAKINNKTICEKWTYSPTFYGMPKPLEEMLWLSHWTFGDQLEVG 1084
Query: 468 DTIEISINELENGVKVKRCGIQFLYKPD 551
D + I + E+ +G+ VK+CGI+ +Y+ +
Sbjct: 1085 DEVHILV-EMASGLTVKKCGIRLIYEEE 1111