BLASTX nr result

ID: Panax21_contig00000210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000210
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...    71   1e-10
ref|NP_196887.1| FtsJ-like methyltransferase family protein [Ara...    70   1e-10
ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arab...    70   1e-10
ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...    70   1e-10
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...    70   2e-10

>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = -1

Query: 118 DFFYREAQRLGYVARSTFKLLQMQKQYKLITLGSSVLDL 2
           DFFYREAQRLGYVARS FKLLQ+QKQ+KLIT GSSVLDL
Sbjct: 8   DFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDL 46


>ref|NP_196887.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
           gi|5821280|dbj|BAA83750.1| FtsJ [Arabidopsis thaliana]
           gi|10177649|dbj|BAB11111.1| FtsJ [Arabidopsis thaliana]
           gi|332004564|gb|AED91947.1| FtsJ-like methyltransferase
           family protein [Arabidopsis thaliana]
          Length = 224

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = -1

Query: 118 DFFYREAQRLGYVARSTFKLLQMQKQYKLITLGSSVLDL 2
           DFFYREAQRLGYVARS FKLLQ+QKQYKLI  GSSVLDL
Sbjct: 8   DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDL 46


>ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arabidopsis lyrata subsp.
           lyrata] gi|297317426|gb|EFH47848.1| hypothetical protein
           ARALYDRAFT_325857 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = -1

Query: 118 DFFYREAQRLGYVARSTFKLLQMQKQYKLITLGSSVLDL 2
           DFFYREAQRLGYVARS FKLLQ+QKQYKLI  GSSVLDL
Sbjct: 8   DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDL 46


>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/39 (89%), Positives = 35/39 (89%)
 Frame = -1

Query: 118 DFFYREAQRLGYVARSTFKLLQMQKQYKLITLGSSVLDL 2
           DFFYREAQRLGY ARS FKLLQMQKQYKLI  GSSVLDL
Sbjct: 8   DFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDL 46


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -1

Query: 118 DFFYREAQRLGYVARSTFKLLQMQKQYKLITLGSSVLDL 2
           DFFYREAQRLGYVARS FKLLQ+Q Q+KLIT GSSVLDL
Sbjct: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDL 46


Top