BLASTX nr result
ID: Panax21_contig00000203
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000203 (699 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vi... 146 1e-41 emb|CBI29601.3| unnamed protein product [Vitis vinifera] 146 1e-41 ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like p... 136 6e-32 ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis ... 136 6e-32 ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|2... 124 9e-31 >ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vinifera] Length = 1439 Score = 146 bits (369), Expect(2) = 1e-41 Identities = 75/100 (75%), Positives = 83/100 (83%) Frame = +2 Query: 134 VVLVRAQLFDLAVSLLPGLNPKETDLLFVAIEHGLKDSDGLIQKKAYKVLSIILQNSEGF 313 + LVRAQLFDLAVSLLPGLN KE DLLFVA + L+D +GLIQKKAYKVLSIIL+N + F Sbjct: 880 LALVRAQLFDLAVSLLPGLNAKEIDLLFVATKPALRDDEGLIQKKAYKVLSIILRNCDTF 939 Query: 314 ISRKLEELLNLMIEVLPSCHFPAKRHRLSCLYFLIVYVSK 433 +S K EELL LMIEVLPSCHF AK HRL CLY LIV+ SK Sbjct: 940 LSAKFEELLKLMIEVLPSCHFSAKHHRLECLYSLIVHASK 979 Score = 49.3 bits (116), Expect(2) = 1e-41 Identities = 26/36 (72%), Positives = 27/36 (75%) Frame = +3 Query: 33 TMQNLLKVTQEAGKAEKSRNSKLMEIDNYSTEISLS 140 TMQ LLKVTQEAG AE SRNS MEIDN S SL+ Sbjct: 846 TMQKLLKVTQEAGNAETSRNSNTMEIDNSSNGSSLA 881 >emb|CBI29601.3| unnamed protein product [Vitis vinifera] Length = 1230 Score = 146 bits (369), Expect(2) = 1e-41 Identities = 75/100 (75%), Positives = 83/100 (83%) Frame = +2 Query: 134 VVLVRAQLFDLAVSLLPGLNPKETDLLFVAIEHGLKDSDGLIQKKAYKVLSIILQNSEGF 313 + LVRAQLFDLAVSLLPGLN KE DLLFVA + L+D +GLIQKKAYKVLSIIL+N + F Sbjct: 670 LALVRAQLFDLAVSLLPGLNAKEIDLLFVATKPALRDDEGLIQKKAYKVLSIILRNCDTF 729 Query: 314 ISRKLEELLNLMIEVLPSCHFPAKRHRLSCLYFLIVYVSK 433 +S K EELL LMIEVLPSCHF AK HRL CLY LIV+ SK Sbjct: 730 LSAKFEELLKLMIEVLPSCHFSAKHHRLECLYSLIVHASK 769 Score = 49.3 bits (116), Expect(2) = 1e-41 Identities = 26/36 (72%), Positives = 27/36 (75%) Frame = +3 Query: 33 TMQNLLKVTQEAGKAEKSRNSKLMEIDNYSTEISLS 140 TMQ LLKVTQEAG AE SRNS MEIDN S SL+ Sbjct: 636 TMQKLLKVTQEAGNAETSRNSNTMEIDNSSNGSSLA 671 >ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like protein-like [Cucumis sativus] Length = 1265 Score = 136 bits (343), Expect(2) = 6e-32 Identities = 70/99 (70%), Positives = 81/99 (81%), Gaps = 2/99 (2%) Frame = +2 Query: 143 VRAQLFDLAVSLLPGLNPKETDLLFVAIEHGLK--DSDGLIQKKAYKVLSIILQNSEGFI 316 +RAQ++DLAVS LPGLN KE D+LFVA++ LK D DGLIQKKAYKVLS IL+ S+ F+ Sbjct: 699 MRAQMYDLAVSFLPGLNSKEIDVLFVAVKSALKEQDCDGLIQKKAYKVLSAILKTSDEFL 758 Query: 317 SRKLEELLNLMIEVLPSCHFPAKRHRLSCLYFLIVYVSK 433 S K +ELL LMIEVLP CHF AKRHRL CLYFLIV V+K Sbjct: 759 STKFDELLTLMIEVLPLCHFSAKRHRLDCLYFLIVQVAK 797 Score = 26.9 bits (58), Expect(2) = 6e-32 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +3 Query: 33 TMQNLLKVTQEAGKAEKSRNSKLMEIDNYSTEISLS 140 TM+ LLK+TQ+A K E + S M+ID+ + S S Sbjct: 663 TMRKLLKLTQQAAKVE-PKVSNSMQIDDSTNANSSS 697 >ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis sativus] Length = 1264 Score = 136 bits (343), Expect(2) = 6e-32 Identities = 70/99 (70%), Positives = 81/99 (81%), Gaps = 2/99 (2%) Frame = +2 Query: 143 VRAQLFDLAVSLLPGLNPKETDLLFVAIEHGLK--DSDGLIQKKAYKVLSIILQNSEGFI 316 +RAQ++DLAVS LPGLN KE D+LFVA++ LK D DGLIQKKAYKVLS IL+ S+ F+ Sbjct: 698 MRAQMYDLAVSFLPGLNSKEIDVLFVAVKSALKEQDCDGLIQKKAYKVLSAILKTSDEFL 757 Query: 317 SRKLEELLNLMIEVLPSCHFPAKRHRLSCLYFLIVYVSK 433 S K +ELL LMIEVLP CHF AKRHRL CLYFLIV V+K Sbjct: 758 STKFDELLTLMIEVLPLCHFSAKRHRLDCLYFLIVQVAK 796 Score = 26.9 bits (58), Expect(2) = 6e-32 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +3 Query: 33 TMQNLLKVTQEAGKAEKSRNSKLMEIDNYSTEISLS 140 TM+ LLK+TQ+A K E + S M+ID+ + S S Sbjct: 662 TMRKLLKLTQQAAKVE-PKVSNSMQIDDSTNANSSS 696 >ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|222833495|gb|EEE71972.1| predicted protein [Populus trichocarpa] Length = 1029 Score = 124 bits (310), Expect(2) = 9e-31 Identities = 59/95 (62%), Positives = 79/95 (83%) Frame = +2 Query: 149 AQLFDLAVSLLPGLNPKETDLLFVAIEHGLKDSDGLIQKKAYKVLSIILQNSEGFISRKL 328 A+LFDLA+SLLPGL+ ++ ++L+ A++ L+D +GLIQK+AYKVLSIILQ +GFI+ + Sbjct: 488 ARLFDLAISLLPGLDGEQINVLYSAVKPALQDMEGLIQKRAYKVLSIILQRYDGFITPRF 547 Query: 329 EELLNLMIEVLPSCHFPAKRHRLSCLYFLIVYVSK 433 ELL LMI+VLPSCHF AKRHRL C+Y LIV++ K Sbjct: 548 GELLQLMIDVLPSCHFSAKRHRLDCIYCLIVHIPK 582 Score = 35.8 bits (81), Expect(2) = 9e-31 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = +3 Query: 33 TMQNLLKVTQEAGKAEKSRNSKLMEIDNYSTEISLS 140 TMQ LL VTQ+A KA+ SR+S M ID+ S + L+ Sbjct: 448 TMQKLLAVTQKATKADNSRDSISMRIDDSSNDSRLA 483