BLASTX nr result

ID: Panax21_contig00000202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000202
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]       82   1e-13
gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]       78   2e-12
emb|CBI27170.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...    59   9e-07
gb|ABN06032.1| Galactose-binding like [Medicago truncatula]            59   9e-07

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 68/184 (36%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
 Frame = +3

Query: 24  MAQVVRYHKVDLKTLLSQAKENALLEKDQCKKSSWAFVHAKELNY---ANPSGWKFSDAS 194
           MAQV R   V L T   QA    L +K  C     A + AKEL+    ++P  WK+   +
Sbjct: 1   MAQVQRDDIVSLWTQGFQA----LKDKSSCA----AVLTAKELSIVWGSDPRYWKWVSKT 52

Query: 195 ----------AELIGSLVLHVDGKYPTENLEK-LTYDVSFVVLLKDNLNIESPVSLTLTP 341
                     AELI    L +DG Y   NL K + Y V FVV L  N  +  PV+L LT 
Sbjct: 53  SPVNFEALDAAELIEVCWLQIDGTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTR 112

Query: 342 PDGSTQVNGYELMGCPRNTPISLKAGEFLNNFDSGD--FKFALDGSENATMKKGLVIYGV 515
           P+GS + +  +L   PRN  + LK GEF N     D   KF+++G +  T K GL + G 
Sbjct: 113 PNGSPEEHKEDLQTKPRNKWVGLKVGEFTNTASGCDNTVKFSMNGCDGTTWKTGLTVIGA 172

Query: 516 HISP 527
            I P
Sbjct: 173 AIVP 176


>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = +3

Query: 195 AELIGSLVLHVDGKYPTENLEK-LTYDVSFVVLLKDNLNIESPVSLTLTPPDGSTQVNGY 371
           +ELI    L +DGKY    L + + Y V F+V LK NL +   V+L LT PDG T V   
Sbjct: 66  SELIEVCWLQIDGKYSASKLNQGVKYGVYFIVKLKTNLRLNGKVTLKLTRPDGRTVVTRD 125

Query: 372 ELMGCPRNTPISLKAGEFLNNFDS--GDFKFALDGSENATMKKGLVIYGVHISP 527
           +L   P+NT ++LK GEF+ N  +   + KF+++G +  + K GLV+ G  I P
Sbjct: 126 DLDKRPKNTWVALKVGEFMTNARTCHRNVKFSMNGCDGTSWKSGLVVIGAVIVP 179


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = +3

Query: 195 AELIGSLVLHVDGKYPTENLEK-LTYDVSFVVLLKDNL-NIESPVSLTLTPPDGSTQVNG 368
           AELI    L V GK+ T  L   + Y V+FVV++KD       PV+L L  PDG+TQ + 
Sbjct: 124 AELINVCWLEVHGKFETAKLSPGIMYKVAFVVMMKDPAYGWGVPVNLKLALPDGNTQEHK 183

Query: 369 YELMGCPRNTPISLKAGEFLNNFDS-GDFKFALDGSENATMKKGLVIYGVHISP 527
             L   P+   I +  G+F  + ++ G+ +F+L   E    K GLV+ GV I P
Sbjct: 184 ENLREKPKGQWIEIPVGQFQTSAENIGEIEFSLFEYEGGDWKSGLVVKGVIIQP 237


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
 Frame = +3

Query: 27  AQVVRYHKVDLKTLLSQAKENALLEKDQCKKSSWAFVHAKELNYANPSGWKF---SDAS- 194
           A V  +HK     +   +K N  +   +    +WA          +P+ WK+    D S 
Sbjct: 120 AGVFLHHKTKKYWVEKNSKANCFMLYARALSITWA---------EDPNYWKWIQQKDVSE 170

Query: 195 -----AELIGSLVLHVDGKYPTENLEK-LTYDVSFVVLLKDNLN-IESPVSLTLTPPDGS 353
                AEL     L V GK+ T  L   + Y VSF+++LKD     E PV++ L  P G 
Sbjct: 171 GTTEVAELKRVCWLEVHGKFDTRKLSPGILYQVSFIIMLKDPAQGWELPVNVRLVLPGGK 230

Query: 354 TQVNGYELMGCPRNTPISLKAGEFL-NNFDSGDFKFALDGSENATMKKGLVIYGVHISP 527
            Q +   LM   R   I +  GEF+ +  D G+ + ++   E    K+GLVI G+ I P
Sbjct: 231 KQQHKENLMEKLRARWIEVPVGEFVVSEKDGGEMEISMFEYEGGMWKQGLVIKGIAIKP 289


>gb|ABN06032.1| Galactose-binding like [Medicago truncatula]
          Length = 290

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
 Frame = +3

Query: 93  LLEKDQCKKSSWA-----FVHAKELNYA-NPSGWKF---SDAS------AELIGSLVLHV 227
           L  K + KK+S A     +  A  + +A +P+ WK+    D S      AEL     L V
Sbjct: 124 LHHKTKAKKNSKANCFMLYARALSITWAEDPNYWKWIQQKDVSEGTTEVAELKRVCWLEV 183

Query: 228 DGKYPTENLEK-LTYDVSFVVLLKDNLN-IESPVSLTLTPPDGSTQVNGYELMGCPRNTP 401
            GK+ T  L   + Y VSF+++LKD     E PV++ L  P G  Q +   LM   R   
Sbjct: 184 HGKFDTRKLSPGILYQVSFIIMLKDPAQGWELPVNVRLVLPGGKKQQHKENLMEKLRARW 243

Query: 402 ISLKAGEFL-NNFDSGDFKFALDGSENATMKKGLVIYGVHISP 527
           I +  GEF+ +  D G+ + ++   E    K+GLVI G+ I P
Sbjct: 244 IEVPVGEFVVSEKDGGEMEISMFEYEGGMWKQGLVIKGIAIKP 286


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