BLASTX nr result

ID: Panax21_contig00000198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000198
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303670.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-24
ref|XP_002299450.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
ref|XP_003602688.1| Cyclin-dependent kinase E-1 [Medicago trunca...   115   1e-23
ref|XP_003523203.1| PREDICTED: cyclin-dependent kinase E-1-like ...   111   3e-22
ref|XP_002518859.1| cdk8, putative [Ricinus communis] gi|2235418...   111   3e-22

>ref|XP_002303670.1| predicted protein [Populus trichocarpa] gi|222841102|gb|EEE78649.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  119 bits (298), Expect = 1e-24
 Identities = 61/75 (81%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
 Frame = +2

Query: 218 MGDGHNNRGRGNSYKPEWLQQYDLIGKIGEGTYGLVFIAKIKS--NRSKSIAIKKFKQSK 391
           MGDG NNR   N+ KPEWLQQY+LIGKIGEGTYGLVF+AK KS  NR KSIAIKKFKQSK
Sbjct: 1   MGDG-NNRSSNNNEKPEWLQQYNLIGKIGEGTYGLVFLAKTKSPANRGKSIAIKKFKQSK 59

Query: 392 DGDGVSPTAIREVMV 436
           DGDGVSPTAIRE+M+
Sbjct: 60  DGDGVSPTAIREIML 74


>ref|XP_002299450.1| predicted protein [Populus trichocarpa] gi|222846708|gb|EEE84255.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  117 bits (294), Expect = 3e-24
 Identities = 61/75 (81%), Positives = 65/75 (86%), Gaps = 2/75 (2%)
 Frame = +2

Query: 218 MGDGHNNRGRGNSYKPEWLQQYDLIGKIGEGTYGLVFIAKIKS--NRSKSIAIKKFKQSK 391
           MGDG NNR   NS KPEWLQQY+LIGKIGEGTYGLVF+AK KS  N  KSIAIKKFKQSK
Sbjct: 1   MGDG-NNRSNNNSEKPEWLQQYNLIGKIGEGTYGLVFLAKTKSPANCGKSIAIKKFKQSK 59

Query: 392 DGDGVSPTAIREVMV 436
           DGDGVSPTAIRE+M+
Sbjct: 60  DGDGVSPTAIREIML 74


>ref|XP_003602688.1| Cyclin-dependent kinase E-1 [Medicago truncatula]
           gi|355491736|gb|AES72939.1| Cyclin-dependent kinase E-1
           [Medicago truncatula]
          Length = 474

 Score =  115 bits (289), Expect = 1e-23
 Identities = 60/75 (80%), Positives = 65/75 (86%), Gaps = 2/75 (2%)
 Frame = +2

Query: 218 MGDGHNNRGRGNSYKPEWLQQYDLIGKIGEGTYGLVFIAKIKS--NRSKSIAIKKFKQSK 391
           M DG+    R NS KPEWLQQYDLIGKIGEGTYGLVF+A+IKS  NR KSIAIKKFKQSK
Sbjct: 1   MADGN----RSNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSTTNRGKSIAIKKFKQSK 56

Query: 392 DGDGVSPTAIREVMV 436
           DGDGVSPTAIRE+M+
Sbjct: 57  DGDGVSPTAIREIML 71


>ref|XP_003523203.1| PREDICTED: cyclin-dependent kinase E-1-like [Glycine max]
          Length = 462

 Score =  111 bits (277), Expect = 3e-22
 Identities = 58/75 (77%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = +2

Query: 218 MGDGHNNRGRGNSYKPEWLQQYDLIGKIGEGTYGLVFIAKIKS--NRSKSIAIKKFKQSK 391
           MGD   +    N  KPEWLQQYDLIGKIGEGTYGLVF+A+IKS  NR KSIAIKKFKQSK
Sbjct: 1   MGDDSGS----NRSKPEWLQQYDLIGKIGEGTYGLVFLARIKSSTNRGKSIAIKKFKQSK 56

Query: 392 DGDGVSPTAIREVMV 436
           DGDGVSPTAIRE+M+
Sbjct: 57  DGDGVSPTAIREIML 71


>ref|XP_002518859.1| cdk8, putative [Ricinus communis] gi|223541846|gb|EEF43392.1| cdk8,
           putative [Ricinus communis]
          Length = 477

 Score =  111 bits (277), Expect = 3e-22
 Identities = 60/82 (73%), Positives = 67/82 (81%), Gaps = 9/82 (10%)
 Frame = +2

Query: 218 MGDGH-NNRGRG------NSYKPEWLQQYDLIGKIGEGTYGLVFIAKIKS--NRSKSIAI 370
           MGDG+ +N  RG       + KPEWLQQY+LIGKIGEGTYGLVF+AK KS  NR KSIAI
Sbjct: 1   MGDGNTSNTNRGITSNSNTNEKPEWLQQYNLIGKIGEGTYGLVFLAKTKSPANRGKSIAI 60

Query: 371 KKFKQSKDGDGVSPTAIREVMV 436
           KKFKQSKDGDGVSPTAIRE+M+
Sbjct: 61  KKFKQSKDGDGVSPTAIREIML 82


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