BLASTX nr result

ID: Panax21_contig00000187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000187
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531785.1| conserved hypothetical protein [Ricinus comm...    82   4e-13
ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
emb|CAN64892.1| hypothetical protein VITISV_016441 [Vitis vinifera]    79   2e-12
ref|XP_002530102.1| conserved hypothetical protein [Ricinus comm...    78   4e-12
ref|XP_002322651.1| predicted protein [Populus trichocarpa] gi|2...    77   9e-12

>ref|XP_002531785.1| conserved hypothetical protein [Ricinus communis]
            gi|223528578|gb|EEF30599.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 305

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 53/138 (38%), Positives = 67/138 (48%)
 Frame = -2

Query: 1140 LAVKPGVVHQAQSYLVVCIFLFFM*V*YYQYLH*IH*KLYLQFHQQTMTKMMMKFGIAPN 961
            LAVKPGVV + Q YL+                             + +TKMM K G++PN
Sbjct: 115  LAVKPGVVQKIQFYLM-----------------------------EVITKMMTKVGMSPN 145

Query: 960  LSTFQGNLPASLQSGMTMLNDPTNQNQTGSIMGFAKKAPDNTSQGLSQDANSQIVSTYET 781
            LS  QG  P S+QSG++ L+ P  QN  GSI   A + PD TSQ +    N     +Y  
Sbjct: 146  LSISQGGFPMSMQSGISTLSGPLIQNPLGSITQLAPQLPDQTSQSMHGFGNMSPRPSYGN 205

Query: 780  FASKSPPLSVPYGSRTEK 727
             AS S     P+GSRTEK
Sbjct: 206  SASISSLGDTPFGSRTEK 223


>ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|222840809|gb|EEE78356.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 47/95 (49%), Positives = 58/95 (61%)
 Frame = -2

Query: 1005 QTMTKMMMKFGIAPNLSTFQGNLPASLQSGMTMLNDPTNQNQTGSIMGFAKKAPDNTSQG 826
            + + KMM K GIAPNLS  QG LP SLQSG++ML + + QN  G+I   A+K PD TSQ 
Sbjct: 181  EVLMKMMTKLGIAPNLSIGQGALPMSLQSGVSMLTESSIQNPLGNITQLARKLPDQTSQS 240

Query: 825  LSQDANSQIVSTYETFASKSPPLSVPYGSRTEKGI 721
            L    N    S+ E+  SK    S  +GSRTEK I
Sbjct: 241  LYGYGNVSSHSSSESSTSKGSDTS--FGSRTEKVI 273


>emb|CAN64892.1| hypothetical protein VITISV_016441 [Vitis vinifera]
          Length = 1497

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = -1

Query: 142 RVLEIIFWHIPSKAYKKVAPRFSVHKHCVGSIFRETVAAQEAEMGIM 2
           RV EIIFWHIPSKAYKKVAP+  +HK CVGSI +E VA QEAEMGIM
Sbjct: 249 RVPEIIFWHIPSKAYKKVAPKLGIHKPCVGSINKEXVATQEAEMGIM 295



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = -1

Query: 139  VLEIIFWHIPSKAYKKVAPRFSVHKHCVGSIFRETVAAQEAEMGIM 2
            V EIIFWHIPSKAYK+VAP F +HK CVGSI +E VA+QEAEMGIM
Sbjct: 1007 VPEIIFWHIPSKAYKEVAPMFRIHKPCVGSINKEKVASQEAEMGIM 1052


>ref|XP_002530102.1| conserved hypothetical protein [Ricinus communis]
           gi|223530413|gb|EEF32301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -1

Query: 142 RVLEIIFWHIPSKAYKKVAPRFSVHKHCVGSIFRETVAAQEAEMGIM 2
           RV EI+FWHIPSKAYKKVAPRF +HK CVGSI  E VAAQEAE GIM
Sbjct: 257 RVPEIVFWHIPSKAYKKVAPRFWIHKPCVGSINLEHVAAQEAEYGIM 303


>ref|XP_002322651.1| predicted protein [Populus trichocarpa] gi|222867281|gb|EEF04412.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 37/56 (66%), Positives = 42/56 (75%)
 Frame = -1

Query: 169 VKPNITSMIRVLEIIFWHIPSKAYKKVAPRFSVHKHCVGSIFRETVAAQEAEMGIM 2
           V   I    RV E+IFWHIPSKAYK VAPR  +HK CVGS+ +E VAAQEAE+GIM
Sbjct: 265 VSEEINPDSRVPEVIFWHIPSKAYKNVAPRLRIHKPCVGSMNKEKVAAQEAELGIM 320


Top