BLASTX nr result

ID: Panax21_contig00000179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000179
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40324.3| unnamed protein product [Vitis vinifera]              464   e-128
ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   464   e-128
ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   461   e-128
ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putativ...   461   e-128

>emb|CBI40324.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  464 bits (1193), Expect = e-128
 Identities = 230/252 (91%), Positives = 243/252 (96%)
 Frame = +3

Query: 99  GTDSSTEEVEKIIQSEAVDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKREL 278
           G DS+ +EVEK +QSEAVDSSSQDWKA+LK+PP DTRYRTEDVTATKGNEFEDYFLKREL
Sbjct: 50  GADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLKREL 109

Query: 279 LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALERIDQDNNVIQV 458
           LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE+IDQDNNVIQV
Sbjct: 110 LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQV 169

Query: 459 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 638
           VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD
Sbjct: 170 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 229

Query: 639 LAKKGICDLNNCAMLVMDEADKLLSLEFQPSIEQLIRFLPTNRQILMFSATFPVTVKDFK 818
           L+KKG+C L +C+MLVMDEADKLLS EFQPSIEQLI F+P NRQIL+FSATFPVTVKDFK
Sbjct: 230 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIHFMPLNRQILLFSATFPVTVKDFK 289

Query: 819 DRYLQKPYVINL 854
           DRYLQKPY+INL
Sbjct: 290 DRYLQKPYIINL 301


>ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
           gi|147785187|emb|CAN75439.1| hypothetical protein
           VITISV_000835 [Vitis vinifera]
          Length = 491

 Score =  464 bits (1193), Expect = e-128
 Identities = 230/252 (91%), Positives = 243/252 (96%)
 Frame = +3

Query: 99  GTDSSTEEVEKIIQSEAVDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKREL 278
           G DS+ +EVEK +QSEAVDSSSQDWKA+LK+PP DTRYRTEDVTATKGNEFEDYFLKREL
Sbjct: 69  GADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLKREL 128

Query: 279 LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALERIDQDNNVIQV 458
           LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE+IDQDNNVIQV
Sbjct: 129 LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQV 188

Query: 459 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 638
           VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD
Sbjct: 189 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 248

Query: 639 LAKKGICDLNNCAMLVMDEADKLLSLEFQPSIEQLIRFLPTNRQILMFSATFPVTVKDFK 818
           L+KKG+C L +C+MLVMDEADKLLS EFQPSIEQLI F+P NRQIL+FSATFPVTVKDFK
Sbjct: 249 LSKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIHFMPLNRQILLFSATFPVTVKDFK 308

Query: 819 DRYLQKPYVINL 854
           DRYLQKPY+INL
Sbjct: 309 DRYLQKPYIINL 320


>ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|222843075|gb|EEE80622.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  463 bits (1191), Expect = e-128
 Identities = 230/250 (92%), Positives = 242/250 (96%)
 Frame = +3

Query: 105 DSSTEEVEKIIQSEAVDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELLM 284
           DSS +EVEK +QSEAVDSSSQDWKA+LK+PP DTRYRTEDVTATKGN+FEDYFLKRELLM
Sbjct: 79  DSSIDEVEKTVQSEAVDSSSQDWKAKLKIPPADTRYRTEDVTATKGNDFEDYFLKRELLM 138

Query: 285 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALERIDQDNNVIQVVI 464
           GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC+PALE+IDQDNN IQVVI
Sbjct: 139 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCVPALEKIDQDNNFIQVVI 198

Query: 465 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 644
           LVPTRELALQTSQVCKELGKHLKIQVM TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA
Sbjct: 199 LVPTRELALQTSQVCKELGKHLKIQVMATTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 258

Query: 645 KKGICDLNNCAMLVMDEADKLLSLEFQPSIEQLIRFLPTNRQILMFSATFPVTVKDFKDR 824
           KKG+C L NC+MLV+DEADKLLS EFQPSIEQLIRFLP+NRQILMFSATFPVTVKDFKDR
Sbjct: 259 KKGVCILKNCSMLVLDEADKLLSPEFQPSIEQLIRFLPSNRQILMFSATFPVTVKDFKDR 318

Query: 825 YLQKPYVINL 854
           YL+KPYVINL
Sbjct: 319 YLEKPYVINL 328


>ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
          Length = 500

 Score =  461 bits (1187), Expect = e-128
 Identities = 231/249 (92%), Positives = 241/249 (96%)
 Frame = +3

Query: 108 SSTEEVEKIIQSEAVDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELLMG 287
           ++ +EVEK +QSEAVDSSSQDWKA+LK+PP DTRY+TEDVTATKGNEFEDYFLKRELLMG
Sbjct: 81  NAVDEVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKGNEFEDYFLKRELLMG 140

Query: 288 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALERIDQDNNVIQVVIL 467
           IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE+IDQDNNVIQVVIL
Sbjct: 141 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVIL 200

Query: 468 VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAK 647
           VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAK
Sbjct: 201 VPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAK 260

Query: 648 KGICDLNNCAMLVMDEADKLLSLEFQPSIEQLIRFLPTNRQILMFSATFPVTVKDFKDRY 827
           KG+C L +CAMLVMDEADKLLS EFQPSIEQLI FLPT RQILMFSATFPVTVKDFKDRY
Sbjct: 261 KGVCILKDCAMLVMDEADKLLSPEFQPSIEQLIHFLPTTRQILMFSATFPVTVKDFKDRY 320

Query: 828 LQKPYVINL 854
           LQKPYVINL
Sbjct: 321 LQKPYVINL 329


>ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549011|gb|EEF50500.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 507

 Score =  461 bits (1187), Expect = e-128
 Identities = 230/250 (92%), Positives = 242/250 (96%)
 Frame = +3

Query: 105 DSSTEEVEKIIQSEAVDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELLM 284
           DSS +EVEK +QSEAVDS+SQDWKA+LK+PP DTRY+TEDVTATKGNEFEDYFLKRELLM
Sbjct: 87  DSSVDEVEKTVQSEAVDSTSQDWKARLKIPPPDTRYKTEDVTATKGNEFEDYFLKRELLM 146

Query: 285 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALERIDQDNNVIQVVI 464
           GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE+IDQDNNVIQVVI
Sbjct: 147 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVI 206

Query: 465 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 644
           LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA
Sbjct: 207 LVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 266

Query: 645 KKGICDLNNCAMLVMDEADKLLSLEFQPSIEQLIRFLPTNRQILMFSATFPVTVKDFKDR 824
           KKG+C L +C+MLVMDEADKLLS EFQPS+EQLIRFLP  RQILMFSATFPVTVKDFKDR
Sbjct: 267 KKGVCVLKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPPTRQILMFSATFPVTVKDFKDR 326

Query: 825 YLQKPYVINL 854
           +LQKPYVINL
Sbjct: 327 FLQKPYVINL 336


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