BLASTX nr result

ID: Panax21_contig00000176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000176
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   272   9e-71
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69
ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1...   269   1e-69
ref|XP_003556169.1| PREDICTED: ran-binding protein 1 homolog b-l...   268   2e-69
ref|XP_004153401.1| PREDICTED: LOW QUALITY PROTEIN: ran-binding ...   268   2e-69

>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  272 bits (696), Expect = 9e-71
 Identities = 146/224 (65%), Positives = 165/224 (73%), Gaps = 4/224 (1%)
 Frame = +2

Query: 2   SNDPEHRXXXXXXXXXXXXXX-AQVAPIVRLEKVAVTTGEEDEDAILDLKSKLYRFDKDG 178
           S+DPE R               AQVAPIV+LE+VAVTTGEEDEDA+LDLK+KLYRFDKDG
Sbjct: 3   SSDPERREDEDAAAAAEDEDTGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDG 62

Query: 179 NQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPALTVQEHAGNEKSCVWHA 358
           NQWKERGAG+VKLLKHKE+GKVRLVMRQSKTLKICANHLVLP ++VQEHAGN+KSCVWHA
Sbjct: 63  NQWKERGAGSVKLLKHKESGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHA 122

Query: 359 TDFADGELKDELFCIRFGSVENCKSFMETFQEVAESQVKKEENEGTXXXXXXXKLIDKLS 538
           TDFADGELKDELFCIRF SVENCKSFME  QEVAESQ KKEEN+          L++KLS
Sbjct: 123 TDFADGELKDELFCIRFASVENCKSFMEKVQEVAESQQKKEENKDASAAAG---LLEKLS 179

Query: 539 VXXXXXXXXXXXXXXXXXXXXSDEEPKKADSN---KVEEPSSAT 661
           V                     + E ++  ++   KVEEPSS+T
Sbjct: 180 VEEKETEDKAEEEKPVAAKEEKETESEQGKTDAEKKVEEPSSST 223


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  269 bits (687), Expect = 1e-69
 Identities = 144/216 (66%), Positives = 156/216 (72%)
 Frame = +2

Query: 14  EHRXXXXXXXXXXXXXXAQVAPIVRLEKVAVTTGEEDEDAILDLKSKLYRFDKDGNQWKE 193
           EHR              AQVAPIV+LE+VAV+TGEEDEDAILDLKSKLYRFDKDGNQWKE
Sbjct: 9   EHREDEEAPAGEDEDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKE 68

Query: 194 RGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPALTVQEHAGNEKSCVWHATDFAD 373
           RGAGTVKLLKHKE+GKVRLVMRQSKTLKICANHLVLP ++VQEHAGN+KSCVWHATDFAD
Sbjct: 69  RGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFAD 128

Query: 374 GELKDELFCIRFGSVENCKSFMETFQEVAESQVKKEENEGTXXXXXXXKLIDKLSVXXXX 553
           GELKDELFCIRF SVENCK+FME FQEVAESQ  KEENE           ++KLSV    
Sbjct: 129 GELKDELFCIRFASVENCKTFMEMFQEVAESQESKEENEDA---TVAADALEKLSV---- 181

Query: 554 XXXXXXXXXXXXXXXXSDEEPKKADSNKVEEPSSAT 661
                              E KK + N  EE  +AT
Sbjct: 182 -------------------EGKKTEENAGEEAPAAT 198


>ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1|
           unknown [Populus trichocarpa]
           gi|222845745|gb|EEE83292.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  269 bits (687), Expect = 1e-69
 Identities = 144/222 (64%), Positives = 158/222 (71%), Gaps = 2/222 (0%)
 Frame = +2

Query: 2   SNDPEH--RXXXXXXXXXXXXXXAQVAPIVRLEKVAVTTGEEDEDAILDLKSKLYRFDKD 175
           S +PEH  R              AQVAPIV+LE+VAV+TGEEDED ILDLKSKLYRFDKD
Sbjct: 3   STEPEHQHREDEEAPAGDDEDTGAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKD 62

Query: 176 GNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPALTVQEHAGNEKSCVWH 355
           GNQWKERGAGTVK LKHKE+GKVRLVMRQSKTLKICANHLVLPA++VQEHAGNEKSCVWH
Sbjct: 63  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWH 122

Query: 356 ATDFADGELKDELFCIRFGSVENCKSFMETFQEVAESQVKKEENEGTXXXXXXXKLIDKL 535
           ATDFADGELKDELFCIRF SVENCK+FME FQEVAESQ   EEN+           +DKL
Sbjct: 123 ATDFADGELKDELFCIRFASVENCKTFMEMFQEVAESQKSNEENKDA---TAAADALDKL 179

Query: 536 SVXXXXXXXXXXXXXXXXXXXXSDEEPKKADSNKVEEPSSAT 661
           SV                     +EE K  +  K E+P  +T
Sbjct: 180 SV---EEKKTEEKAVEESPTAAKEEETKTCEDKKEEKPDPST 218


>ref|XP_003556169.1| PREDICTED: ran-binding protein 1 homolog b-like [Glycine max]
          Length = 223

 Score =  268 bits (684), Expect = 2e-69
 Identities = 140/220 (63%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   SNDPEHRXXXXXXXXXXXXXX-AQVAPIVRLEKVAVTTGEEDEDAILDLKSKLYRFDKDG 178
           S DPEHR               A VAPIV+LE+VAVTTGEEDEDAILDLKSKLYRFDKDG
Sbjct: 3   SADPEHREEEEAPAVGDDEDTGAHVAPIVKLEEVAVTTGEEDEDAILDLKSKLYRFDKDG 62

Query: 179 NQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPALTVQEHAGNEKSCVWHA 358
           NQWKERGAGTVK LKHK TGKVRL+MRQSKTLKICANHL+LP ++VQEHAGNEKSCVWHA
Sbjct: 63  NQWKERGAGTVKFLKHKATGKVRLLMRQSKTLKICANHLILPTMSVQEHAGNEKSCVWHA 122

Query: 359 TDFADGELKDELFCIRFGSVENCKSFMETFQEVAESQVKKEENEGTXXXXXXXKLIDKLS 538
            DFADGELKDELFCIRF S+ENCKSFMETFQEVAESQ  ++E E         KL  +  
Sbjct: 123 RDFADGELKDELFCIRFPSIENCKSFMETFQEVAESQKAEDEKESADAAGLIEKLSVEEK 182

Query: 539 VXXXXXXXXXXXXXXXXXXXXSDEEPKKADSNKVEEPSSA 658
                                S +E K  +  K EEP+S+
Sbjct: 183 ADAEKKDEEKSEDKTVEKESASGKESKAVEDKKAEEPASS 222


>ref|XP_004153401.1| PREDICTED: LOW QUALITY PROTEIN: ran-binding protein 1 homolog
           c-like [Cucumis sativus]
           gi|449517630|ref|XP_004165848.1| PREDICTED: LOW QUALITY
           PROTEIN: ran-binding protein 1 homolog c-like [Cucumis
           sativus] gi|194462393|gb|ACF72671.1| Ran-binding protein
           1 [Cucumis melo var. cantalupensis]
          Length = 197

 Score =  268 bits (684), Expect = 2e-69
 Identities = 136/180 (75%), Positives = 147/180 (81%)
 Frame = +2

Query: 2   SNDPEHRXXXXXXXXXXXXXXAQVAPIVRLEKVAVTTGEEDEDAILDLKSKLYRFDKDGN 181
           S+D E R              AQVAPIV+LE V VTTGEEDEDAILDLKSKLYRFDKDGN
Sbjct: 3   SSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKDGN 62

Query: 182 QWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPALTVQEHAGNEKSCVWHAT 361
           QWKERGAGTVK LKHKETG+VRLVMRQSKTLKICANHLVLP++TVQEH GNEKSCVWHAT
Sbjct: 63  QWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHAT 122

Query: 362 DFADGELKDELFCIRFGSVENCKSFMETFQEVAESQVKKEENEGTXXXXXXXKLIDKLSV 541
           DFADGELKDELFCIRF S++NCK+FMETFQEVAESQ KK EN+          L++KLSV
Sbjct: 123 DFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAG---LLEKLSV 179


Top