BLASTX nr result

ID: Panax21_contig00000175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000175
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327761.1| predicted protein [Populus trichocarpa] gi|1...   183   1e-44
ref|XP_002310303.1| predicted protein [Populus trichocarpa] gi|1...   183   1e-44
ref|XP_002515688.1| 60S ribosomal protein L8, putative [Ricinus ...   182   2e-44
ref|XP_002526326.1| 60S ribosomal protein L8, putative [Ricinus ...   182   2e-44
ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   182   3e-44

>ref|XP_002327761.1| predicted protein [Populus trichocarpa] gi|118484622|gb|ABK94183.1|
           unknown [Populus trichocarpa]
           gi|222836846|gb|EEE75239.1| predicted protein [Populus
           trichocarpa]
          Length = 260

 Score =  183 bits (464), Expect = 1e-44
 Identities = 92/132 (69%), Positives = 97/132 (73%)
 Frame = +1

Query: 46  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIVHDPGRGAXXXX 225
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEI+HDPGRGA    
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGA---- 56

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTGQFIFCGKKANLMVGNVLPLRAIPEGA 405
                                          YTGQF++CGKKANLMVGNVLPLR++PEGA
Sbjct: 57  -----PLARVSFRHPFRYKKQKELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSVPEGA 111

Query: 406 VVCNVEHHVGDR 441
           VVCNVEHHVGDR
Sbjct: 112 VVCNVEHHVGDR 123


>ref|XP_002310303.1| predicted protein [Populus trichocarpa] gi|118484023|gb|ABK93898.1|
           unknown [Populus trichocarpa]
           gi|118486019|gb|ABK94853.1| unknown [Populus
           trichocarpa] gi|222853206|gb|EEE90753.1| predicted
           protein [Populus trichocarpa]
          Length = 260

 Score =  183 bits (464), Expect = 1e-44
 Identities = 92/132 (69%), Positives = 97/132 (73%)
 Frame = +1

Query: 46  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIVHDPGRGAXXXX 225
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEI+HDPGRGA    
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGA---- 56

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTGQFIFCGKKANLMVGNVLPLRAIPEGA 405
                                          YTGQF++CGKKANLMVGNVLPLR++PEGA
Sbjct: 57  -----PLARVTFRHPFRYKKQKELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSVPEGA 111

Query: 406 VVCNVEHHVGDR 441
           VVCNVEHHVGDR
Sbjct: 112 VVCNVEHHVGDR 123


>ref|XP_002515688.1| 60S ribosomal protein L8, putative [Ricinus communis]
           gi|223545125|gb|EEF46635.1| 60S ribosomal protein L8,
           putative [Ricinus communis]
          Length = 261

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/132 (69%), Positives = 97/132 (73%)
 Frame = +1

Query: 46  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIVHDPGRGAXXXX 225
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVT+I+HDPGRGA    
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGA---- 56

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTGQFIFCGKKANLMVGNVLPLRAIPEGA 405
                                          YTGQF++CGKKANLMVGNVLPLR+IPEGA
Sbjct: 57  -----PLAKVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGA 111

Query: 406 VVCNVEHHVGDR 441
           VVCNVEHHVGDR
Sbjct: 112 VVCNVEHHVGDR 123


>ref|XP_002526326.1| 60S ribosomal protein L8, putative [Ricinus communis]
           gi|223534353|gb|EEF36062.1| 60S ribosomal protein L8,
           putative [Ricinus communis]
          Length = 261

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/132 (69%), Positives = 97/132 (73%)
 Frame = +1

Query: 46  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIVHDPGRGAXXXX 225
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVT+I+HDPGRGA    
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGA---- 56

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTGQFIFCGKKANLMVGNVLPLRAIPEGA 405
                                          YTGQF++CGKKANLMVGNVLPLR+IPEGA
Sbjct: 57  -----PLAKVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGA 111

Query: 406 VVCNVEHHVGDR 441
           VVCNVEHHVGDR
Sbjct: 112 VVCNVEHHVGDR 123


>ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
           gi|147864499|emb|CAN80494.1| hypothetical protein
           VITISV_021173 [Vitis vinifera]
          Length = 260

 Score =  182 bits (461), Expect = 3e-44
 Identities = 92/132 (69%), Positives = 97/132 (73%)
 Frame = +1

Query: 46  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIVHDPGRGAXXXX 225
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEI+HDPGRGA    
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGA---- 56

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTGQFIFCGKKANLMVGNVLPLRAIPEGA 405
                                          YTGQF++CGKKANL+VGNVLPLR+IPEGA
Sbjct: 57  -----PLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPLRSIPEGA 111

Query: 406 VVCNVEHHVGDR 441
           VVCNVEHHVGDR
Sbjct: 112 VVCNVEHHVGDR 123


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