BLASTX nr result

ID: Panax21_contig00000174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000174
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric...   107   1e-21
emb|CBI28040.3| unnamed protein product [Vitis vinifera]              105   4e-21
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]   105   4e-21
ref|XP_003630767.1| U-box domain-containing protein [Medicago tr...   102   3e-20
ref|XP_003524399.1| PREDICTED: uncharacterized protein LOC100787...   100   1e-19

>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223546727|gb|EEF48225.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1268

 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/96 (61%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
 Frame = -1

Query: 445 QKLNGTQLPKTNYVLKRLIASWREHNPNLDLIQSENQYQESEPNFSSGM--PLASPDSVI 272
           Q L+  QLPKTNYVLKRL+ASWRE NP     QSE   Q++EPNF S +  P+ SP+SVI
Sbjct: 460 QALHSNQLPKTNYVLKRLVASWREQNPEFASNQSETAPQKTEPNFKSTIISPVTSPNSVI 519

Query: 271 WQVTMDCTVGEL*LAIKNLCMSEILKESEMAVLWIE 164
            Q  +D T+ EL  AI +LCMSEIL ESEMAVL IE
Sbjct: 520 SQSAIDSTMSELRQAITDLCMSEILSESEMAVLRIE 555


>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
          Length = 1154

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/98 (62%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
 Frame = -1

Query: 445 QKLNGTQLPKTNYVLKRLIASWREHNPNLDLIQSENQYQESEPNFSSGMPL---ASPDSV 275
           QKL+ TQLPKTNYVLKRLIASW+E NP    I S+N   E++P F+S +P+    SP+SV
Sbjct: 256 QKLHSTQLPKTNYVLKRLIASWQEQNPGFISIHSDNPDPETDPIFNSTLPVLPSTSPNSV 315

Query: 274 -IWQVTMDCTVGEL*LAIKNLCMSEILKESEMAVLWIE 164
            I Q TMD T+ EL LAI  LCMSEIL+ESE AVL IE
Sbjct: 316 IISQATMDGTICELRLAITKLCMSEILRESEKAVLRIE 353


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/98 (62%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
 Frame = -1

Query: 445  QKLNGTQLPKTNYVLKRLIASWREHNPNLDLIQSENQYQESEPNFSSGMPL---ASPDSV 275
            QKL+ TQLPKTNYVLKRLIASW+E NP    I S+N   E++P F+S +P+    SP+SV
Sbjct: 720  QKLHSTQLPKTNYVLKRLIASWQEQNPGFISIHSDNPDPETDPIFNSTLPVLPSTSPNSV 779

Query: 274  -IWQVTMDCTVGEL*LAIKNLCMSEILKESEMAVLWIE 164
             I Q TMD T+ EL LAI  LCMSEIL+ESE AVL IE
Sbjct: 780  IISQATMDGTICELRLAITKLCMSEILRESEKAVLRIE 817


>ref|XP_003630767.1| U-box domain-containing protein [Medicago truncatula]
           gi|355524789|gb|AET05243.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 1068

 Score =  102 bits (255), Expect = 3e-20
 Identities = 55/94 (58%), Positives = 67/94 (71%)
 Frame = -1

Query: 445 QKLNGTQLPKTNYVLKRLIASWREHNPNLDLIQSENQYQESEPNFSSGMPLASPDSVIWQ 266
           QKL  T+LPKTNYVLKRL+ASW+EHNP+      E  Y++SE    + +P  SP+SVI Q
Sbjct: 196 QKLQNTKLPKTNYVLKRLVASWKEHNPSSVPPTCECPYKDSESVVKTEIPSTSPNSVITQ 255

Query: 265 VTMDCTVGEL*LAIKNLCMSEILKESEMAVLWIE 164
            T+D  +GEL  AI NL MSEIL+ESEMA L IE
Sbjct: 256 ATVDGMIGELRCAINNLYMSEILQESEMAALQIE 289


>ref|XP_003524399.1| PREDICTED: uncharacterized protein LOC100787950 [Glycine max]
          Length = 1421

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/94 (58%), Positives = 66/94 (70%)
 Frame = -1

Query: 445 QKLNGTQLPKTNYVLKRLIASWREHNPNLDLIQSENQYQESEPNFSSGMPLASPDSVIWQ 266
           QKL  TQLPKTNYVLKRLIASW++ NP+L     E  Y+E+E      +P  SP+SVI Q
Sbjct: 498 QKLQNTQLPKTNYVLKRLIASWKDRNPHLVPPSYEIPYEETEEAVKLTIPSTSPNSVITQ 557

Query: 265 VTMDCTVGEL*LAIKNLCMSEILKESEMAVLWIE 164
            T+D  + EL  AI NL MSE+L+ESEMAVL IE
Sbjct: 558 ATVDGMMSELRCAINNLYMSEVLQESEMAVLQIE 591


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