BLASTX nr result

ID: Panax21_contig00000168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000168
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24756.3| unnamed protein product [Vitis vinifera]              285   7e-75
ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259...   285   7e-75
ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu...   279   5e-73
ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259...   245   8e-63
ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207...   236   4e-60

>emb|CBI24756.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  285 bits (730), Expect = 7e-75
 Identities = 156/241 (64%), Positives = 173/241 (71%)
 Frame = -3

Query: 828 IVVAENLPEDHCHQNLMKVFSAVGSVKSIRTCQPQTSNGGASSASRTAKADGMLYSNKLH 649
           IVVAENLPEDHCHQNLMK+FSAVGSVK+IRTCQPQTSNGGASSA+R++K D ML+SNKLH
Sbjct: 100 IVVAENLPEDHCHQNLMKIFSAVGSVKTIRTCQPQTSNGGASSAARSSKTDNMLFSNKLH 159

Query: 648 AFVEYESVELAEKAVVELNEEDNWRNGLRVRLLHKRTKKSAQARVKKVGHEGEAHRKEDD 469
           AFVEYES+ELAEKAVVELN+E NWR+GLRVRL+H+R  KSAQAR +K GHEGEA  +EDD
Sbjct: 160 AFVEYESIELAEKAVVELNDEGNWRSGLRVRLMHRRVAKSAQARSRK-GHEGEAICEEDD 218

Query: 468 TSTSEQQEPIEKHLEGPSQHEDQSNQAHEHGAEEHTNDKEGSQXXXXXXXXXXXXXRPQY 289
             TSEQ       L    Q ED    +HEH  EEH NDKEG+Q             R QY
Sbjct: 219 ACTSEQ-------LPNDKQPEDPDVHSHEHAGEEHINDKEGAQRKGRSRGRGKGRGRGQY 271

Query: 288 XXXXXXXXXXXXXXXHVGTPLSVRPANSEYPTVSKQPPGPRMPDGTRGFSMGRGKPVAVN 109
                          HVGTP +    N E P V+K PPGPRMPDGTRGFSMGRGKPVAVN
Sbjct: 272 -------HHHGNRGNHVGTPPN-SSINHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVN 323

Query: 108 I 106
           I
Sbjct: 324 I 324


>ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis
           vinifera]
          Length = 454

 Score =  285 bits (730), Expect = 7e-75
 Identities = 156/241 (64%), Positives = 173/241 (71%)
 Frame = -3

Query: 828 IVVAENLPEDHCHQNLMKVFSAVGSVKSIRTCQPQTSNGGASSASRTAKADGMLYSNKLH 649
           IVVAENLPEDHCHQNLMK+FSAVGSVK+IRTCQPQTSNGGASSA+R++K D ML+SNKLH
Sbjct: 229 IVVAENLPEDHCHQNLMKIFSAVGSVKTIRTCQPQTSNGGASSAARSSKTDNMLFSNKLH 288

Query: 648 AFVEYESVELAEKAVVELNEEDNWRNGLRVRLLHKRTKKSAQARVKKVGHEGEAHRKEDD 469
           AFVEYES+ELAEKAVVELN+E NWR+GLRVRL+H+R  KSAQAR +K GHEGEA  +EDD
Sbjct: 289 AFVEYESIELAEKAVVELNDEGNWRSGLRVRLMHRRVAKSAQARSRK-GHEGEAICEEDD 347

Query: 468 TSTSEQQEPIEKHLEGPSQHEDQSNQAHEHGAEEHTNDKEGSQXXXXXXXXXXXXXRPQY 289
             TSEQ       L    Q ED    +HEH  EEH NDKEG+Q             R QY
Sbjct: 348 ACTSEQ-------LPNDKQPEDPDVHSHEHAGEEHINDKEGAQRKGRSRGRGKGRGRGQY 400

Query: 288 XXXXXXXXXXXXXXXHVGTPLSVRPANSEYPTVSKQPPGPRMPDGTRGFSMGRGKPVAVN 109
                          HVGTP +    N E P V+K PPGPRMPDGTRGFSMGRGKPVAVN
Sbjct: 401 -------HHHGNRGNHVGTPPN-SSINHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVN 452

Query: 108 I 106
           I
Sbjct: 453 I 453


>ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 524

 Score =  279 bits (714), Expect = 5e-73
 Identities = 149/241 (61%), Positives = 175/241 (72%)
 Frame = -3

Query: 828 IVVAENLPEDHCHQNLMKVFSAVGSVKSIRTCQPQTSNGGASSASRTAKADGMLYSNKLH 649
           IVVAENLPEDHCHQNLMK+FSAVGSVK+IRTC PQTS GGASSASR+AK +GM +SNKLH
Sbjct: 295 IVVAENLPEDHCHQNLMKIFSAVGSVKTIRTCPPQTSGGGASSASRSAKGEGMHFSNKLH 354

Query: 648 AFVEYESVELAEKAVVELNEEDNWRNGLRVRLLHKRTKKSAQARVKKVGHEGEAHRKEDD 469
           AFVEYESVE+AEKAV ELN+E NWR+GLRVRL+ KR  K  QAR KK GH+G+ H +E++
Sbjct: 355 AFVEYESVEIAEKAVAELNDEQNWRSGLRVRLMLKRASKPTQARGKK-GHDGQGHSEEEE 413

Query: 468 TSTSEQQEPIEKHLEGPSQHEDQSNQAHEHGAEEHTNDKEGSQXXXXXXXXXXXXXRPQY 289
            STSE Q P EK +E PSQ  D    +HEH  E+H N+K+G+Q             R QY
Sbjct: 414 VSTSE-QPPNEKQIEDPSQQYD--GHSHEHSGEDHVNEKDGAQRKGRNRGRGKGRGRGQY 470

Query: 288 XXXXXXXXXXXXXXXHVGTPLSVRPANSEYPTVSKQPPGPRMPDGTRGFSMGRGKPVAVN 109
                          HVGTP S     +E P+++KQPPGPRMPDGT+GF+MGRGKPVAVN
Sbjct: 471 --------HHNNRGNHVGTPPSNNLIINEQPSMAKQPPGPRMPDGTKGFAMGRGKPVAVN 522

Query: 108 I 106
           I
Sbjct: 523 I 523


>ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259405 isoform 2 [Vitis
           vinifera]
          Length = 438

 Score =  245 bits (626), Expect = 8e-63
 Identities = 141/241 (58%), Positives = 157/241 (65%)
 Frame = -3

Query: 828 IVVAENLPEDHCHQNLMKVFSAVGSVKSIRTCQPQTSNGGASSASRTAKADGMLYSNKLH 649
           IVVAENLPEDHCHQNLMK+FSAVGSVK+IRTCQPQTSNGGASSA+R++K D ML+SNK  
Sbjct: 229 IVVAENLPEDHCHQNLMKIFSAVGSVKTIRTCQPQTSNGGASSAARSSKTDNMLFSNK-- 286

Query: 648 AFVEYESVELAEKAVVELNEEDNWRNGLRVRLLHKRTKKSAQARVKKVGHEGEAHRKEDD 469
                         VVELN+E NWR+GLRVRL+H+R  KSAQAR +K GHEGEA  +EDD
Sbjct: 287 --------------VVELNDEGNWRSGLRVRLMHRRVAKSAQARSRK-GHEGEAICEEDD 331

Query: 468 TSTSEQQEPIEKHLEGPSQHEDQSNQAHEHGAEEHTNDKEGSQXXXXXXXXXXXXXRPQY 289
             TSEQ       L    Q ED    +HEH  EEH NDKEG+Q             R QY
Sbjct: 332 ACTSEQ-------LPNDKQPEDPDVHSHEHAGEEHINDKEGAQRKGRSRGRGKGRGRGQY 384

Query: 288 XXXXXXXXXXXXXXXHVGTPLSVRPANSEYPTVSKQPPGPRMPDGTRGFSMGRGKPVAVN 109
                          HVGTP +    N E P V+K PPGPRMPDGTRGFSMGRGKPVAVN
Sbjct: 385 -------HHHGNRGNHVGTPPN-SSINHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVN 436

Query: 108 I 106
           I
Sbjct: 437 I 437


>ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207485 [Cucumis sativus]
          Length = 492

 Score =  236 bits (603), Expect = 4e-60
 Identities = 139/243 (57%), Positives = 161/243 (66%), Gaps = 2/243 (0%)
 Frame = -3

Query: 828 IVVAENLPEDHCHQNLMKVFSAVGSVKSIRTCQPQTSNGGASSASRTAKADGMLYSNKLH 649
           IV+AENLPEDHCHQNLMK+FSAVGSVK+IRTCQPQ S+ GASS S++AKADGM YSNKLH
Sbjct: 259 IVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLH 318

Query: 648 AFVEYESVELAEKAVVELNEEDNWRNGLRVRLLHKRTKKSAQARVKKVGHEGEAHRKEDD 469
           AFVEYESVELAEKAV ELN+E NWRN LR+RL+   + KSA  R KK GH GE + K+ D
Sbjct: 319 AFVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKK-GHNGEMNYKDVD 377

Query: 468 TSTSEQQEPIEKHLEGPSQHEDQSNQAHEHGAEEHTNDKE-GSQXXXXXXXXXXXXXRPQ 292
           TS   +Q  IEKH++  S   DQ +       EEH N+K+ G Q             R Q
Sbjct: 378 TS---EQPAIEKHVDDLS---DQVDVHPPEQREEHGNEKDGGGQRRVRNRVRGKGRGRSQ 431

Query: 291 YXXXXXXXXXXXXXXXHVGTPLSVRPANSEYP-TVSKQPPGPRMPDGTRGFSMGRGKPVA 115
           Y               H+GTP        E   T+ +QPPGPRMPDGTRGFSMGRGKPV 
Sbjct: 432 Y---HHNHNNNHSHGNHLGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFSMGRGKPVT 488

Query: 114 VNI 106
           VN+
Sbjct: 489 VNM 491


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