BLASTX nr result

ID: Panax21_contig00000164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000164
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            220   2e-55
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   216   6e-54
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   215   1e-53
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   214   2e-53
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   214   2e-53

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  220 bits (561), Expect = 2e-55
 Identities = 118/264 (44%), Positives = 158/264 (59%), Gaps = 5/264 (1%)
 Frame = +1

Query: 22   RNI*QDKALKREKGIGRQENDLFIYKXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXKV 201
            R++  D    R KGIGR+E  L+ +K                  +              V
Sbjct: 449  RSVLHDLCSGRVKGIGREEGGLYSFKANFSSKQKEEIKCAQEIVDAGV-----------V 497

Query: 202  CNTVDLWHAKLGHVPLVVLQSLHLHCNSTS--LP-HYDVCHLSKQTRLPFPISHSVSLSM 372
                ++WH +LGH    +L+ L +  +S    +P H  VC L+KQTRL FP+S + +  M
Sbjct: 498  RQDTEIWHRRLGHPSQQILKLLKIDSSSKGDGIPAHCPVCPLAKQTRLTFPVSTTRTSMM 557

Query: 373  FDLLHCDV*GPYKYKTHTNCSYFLTIVDDFTRCTWTYLFHSKHQVASILKNFISHVCTQF 552
            FD++H D+ GPYK  T     YFLTIVDD++R  W +L   K +    +KNF S + TQF
Sbjct: 558  FDVVHMDLWGPYKTPTLNRKHYFLTIVDDYSRFVWVHLLQLKSETIVAIKNFFSMINTQF 617

Query: 553  NHNVKAIRSDNGTEF--NELASIFLHLGIIHQTSCVYSPQQNGVVERKHRHLLNIARALR 726
            N +VK +RSDNGTEF  ++   +F HLGI+HQ+SC ++PQQNGVVERKHRH+LNIARA+R
Sbjct: 618  NSHVKVVRSDNGTEFLNSQCKDLFNHLGILHQSSCPHTPQQNGVVERKHRHILNIARAIR 677

Query: 727  FNAHLPIHFWGDCLLTATYLINRL 798
            F AHLPI FWG C+  A YL+NRL
Sbjct: 678  FQAHLPIRFWGYCIRAAVYLMNRL 701


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  216 bits (549), Expect = 6e-54
 Identities = 104/202 (51%), Positives = 134/202 (66%), Gaps = 7/202 (3%)
 Frame = +1

Query: 214  DLWHAKLGHVPLV-------VLQSLHLHCNSTSLPHYDVCHLSKQTRLPFPISHSVSLSM 372
            DLWH +LGH           +L  +H    +    H  +C  +KQTRLPFP S   +   
Sbjct: 768  DLWHLRLGHPSFSRFKLLSRLLPDIHKEIGN----HCPICPQAKQTRLPFPKSSITTKFP 823

Query: 373  FDLLHCDV*GPYKYKTHTNCSYFLTIVDDFTRCTWTYLFHSKHQVASILKNFISHVCTQF 552
            F LLHCDV GP+K   HT   YFLTIVDDF+RCTW +L H K +  S+L NF+  V TQF
Sbjct: 824  FSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQF 883

Query: 553  NHNVKAIRSDNGTEFNELASIFLHLGIIHQTSCVYSPQQNGVVERKHRHLLNIARALRFN 732
            + +V+ +R DNGTEF  L     + GI  QTSC+Y+PQQNGVVERKHRH+LN+AR+L F 
Sbjct: 884  HTDVQTVRMDNGTEFIPLRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQ 943

Query: 733  AHLPIHFWGDCLLTATYLINRL 798
            +++P+ FWG+C+LTA YLINR+
Sbjct: 944  SNVPLEFWGECVLTAVYLINRI 965


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  215 bits (547), Expect = 1e-53
 Identities = 109/203 (53%), Positives = 137/203 (67%), Gaps = 3/203 (1%)
 Frame = +1

Query: 196 KVCNTVDLWHAKLGHVPLVVLQSLHLHCNST---SLPHYDVCHLSKQTRLPFPISHSVSL 366
           KV +   LWH +LGH    VL SL +  +S+        DVC  +KQTR  FP+S + S+
Sbjct: 83  KVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSI 142

Query: 367 SMFDLLHCDV*GPYKYKTHTNCSYFLTIVDDFTRCTWTYLFHSKHQVASILKNFISHVCT 546
             F L+HCDV GPY+  +     YFLTIVDDF+R  WTYL  +K +V ++L NF+ +   
Sbjct: 143 ECFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEK 202

Query: 547 QFNHNVKAIRSDNGTEFNELASIFLHLGIIHQTSCVYSPQQNGVVERKHRHLLNIARALR 726
           QF  +VK +RSDNGTEF  LAS F   GI+HQTSCV +PQQNG VERKHRH+LN+ARA+ 
Sbjct: 203 QFGKSVKVLRSDNGTEFMCLASYFREHGIVHQTSCVGTPQQNGRVERKHRHILNVARAIL 262

Query: 727 FNAHLPIHFWGDCLLTATYLINR 795
           F A LPI FWG+ +LTA YLINR
Sbjct: 263 FQASLPIQFWGEAVLTAAYLINR 285


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  214 bits (544), Expect = 2e-53
 Identities = 113/205 (55%), Positives = 137/205 (66%), Gaps = 5/205 (2%)
 Frame = +1

Query: 196  KVCNTVD--LWHAKLGHVPLVVLQSLHLHCNST---SLPHYDVCHLSKQTRLPFPISHSV 360
            KV  T D  LWH +LGH    VL SL L   S+   S    DVC  +KQTR  FP S + 
Sbjct: 503  KVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNK 562

Query: 361  SLSMFDLLHCDV*GPYKYKTHTNCSYFLTIVDDFTRCTWTYLFHSKHQVASILKNFISHV 540
            S   F L+HCDV GPY+  +     YFLTIVDDF+R  WTYL  +K +V S+L NF+++ 
Sbjct: 563  STDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYT 622

Query: 541  CTQFNHNVKAIRSDNGTEFNELASIFLHLGIIHQTSCVYSPQQNGVVERKHRHLLNIARA 720
              QF  +VK IRSDNGTEF  L+S F   GI+HQTSCV +PQQNG VERKHRH+LN++RA
Sbjct: 623  EKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRA 682

Query: 721  LRFNAHLPIHFWGDCLLTATYLINR 795
            L F A LPI FWG+ ++TA YLINR
Sbjct: 683  LLFQASLPIKFWGEAVMTAAYLINR 707


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  214 bits (544), Expect = 2e-53
 Identities = 113/205 (55%), Positives = 137/205 (66%), Gaps = 5/205 (2%)
 Frame = +1

Query: 196  KVCNTVD--LWHAKLGHVPLVVLQSLHLHCNST---SLPHYDVCHLSKQTRLPFPISHSV 360
            KV  T D  LWH +LGH    VL SL L   S+   S    DVC  +KQTR  FP S + 
Sbjct: 503  KVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNK 562

Query: 361  SLSMFDLLHCDV*GPYKYKTHTNCSYFLTIVDDFTRCTWTYLFHSKHQVASILKNFISHV 540
            S   F L+HCDV GPY+  +     YFLTIVDDF+R  WTYL  +K +V S+L NF+++ 
Sbjct: 563  STDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYT 622

Query: 541  CTQFNHNVKAIRSDNGTEFNELASIFLHLGIIHQTSCVYSPQQNGVVERKHRHLLNIARA 720
              QF  +VK IRSDNGTEF  L+S F   GI+HQTSCV +PQQNG VERKHRH+LN++RA
Sbjct: 623  EKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRA 682

Query: 721  LRFNAHLPIHFWGDCLLTATYLINR 795
            L F A LPI FWG+ ++TA YLINR
Sbjct: 683  LLFQASLPIKFWGEAVMTAAYLINR 707


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