BLASTX nr result

ID: Panax21_contig00000135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000135
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32689.3| unnamed protein product [Vitis vinifera]              230   3e-58
gb|ABB16993.1| unknown [Solanum tuberosum]                            228   1e-57
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...   227   2e-57
gb|AFK48775.1| unknown [Lotus japonicus]                              226   5e-57
emb|CBI31516.3| unnamed protein product [Vitis vinifera]              226   5e-57

>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  230 bits (586), Expect = 3e-58
 Identities = 114/123 (92%), Positives = 116/123 (94%)
 Frame = +1

Query: 46  QTQVPV*LLHSAAMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAK 225
           QT   V  L S AMGKTRGMGAGRKLKSHRRRQRWADK+YKKS+LGNEWKKPFAGSSHAK
Sbjct: 35  QTLAAVEQLLSVAMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAK 94

Query: 226 GIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 405
           GIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK
Sbjct: 95  GIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 154

Query: 406 GHA 414
           GHA
Sbjct: 155 GHA 157


>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score =  228 bits (582), Expect = 1e-57
 Identities = 110/110 (100%), Positives = 110/110 (100%)
 Frame = +1

Query: 85  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 264
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 265 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 414
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 110


>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score =  227 bits (579), Expect = 2e-57
 Identities = 109/110 (99%), Positives = 110/110 (100%)
 Frame = +1

Query: 85  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 264
           MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 265 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 414
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 110


>gb|AFK48775.1| unknown [Lotus japonicus]
          Length = 142

 Score =  226 bits (576), Expect = 5e-57
 Identities = 109/110 (99%), Positives = 109/110 (99%)
 Frame = +1

Query: 85  MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 264
           MGKTRGMGA RKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 265 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 414
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 110


>emb|CBI31516.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  226 bits (576), Expect = 5e-57
 Identities = 110/113 (97%), Positives = 112/113 (99%)
 Frame = +1

Query: 76  SAAMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIE 255
           SAAMGKTRGMGAGRKLKSHR RQRWADK+YKKS+LGNEWKKPFAGSSHAKGIVLEKIGIE
Sbjct: 54  SAAMGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIE 113

Query: 256 AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 414
           AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA
Sbjct: 114 AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHA 166


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