BLASTX nr result
ID: Panax21_contig00000125
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000125 (691 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 62 1e-07 emb|CBI18988.3| unnamed protein product [Vitis vinifera] 62 1e-07 emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera] 62 1e-07 ref|XP_002520335.1| DNA binding protein, putative [Ricinus commu... 56 6e-06 >ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-like [Vitis vinifera] Length = 771 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 2/45 (4%) Frame = -3 Query: 686 MVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 558 +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F Sbjct: 699 LVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 743 >emb|CBI18988.3| unnamed protein product [Vitis vinifera] Length = 675 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 2/45 (4%) Frame = -3 Query: 686 MVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 558 +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F Sbjct: 581 LVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 625 >emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera] Length = 334 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 2/45 (4%) Frame = -3 Query: 686 MVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 558 +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F Sbjct: 240 LVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 284 >ref|XP_002520335.1| DNA binding protein, putative [Ricinus communis] gi|223540554|gb|EEF42121.1| DNA binding protein, putative [Ricinus communis] Length = 771 Score = 56.2 bits (134), Expect = 6e-06 Identities = 40/95 (42%), Positives = 48/95 (50%), Gaps = 14/95 (14%) Frame = -3 Query: 686 MVQNNAGNTRQQVVPPS--QPFISGYGNNQPIHPHVSPMQQ---QPTFXXXXXXXXXXXX 522 M NN G++RQQV+P S QP ISGYGNNQ +HPH+S MQ+ QP F Sbjct: 676 MGNNNIGSSRQQVMPTSSSQPSISGYGNNQQVHPHMSFMQRGQPQPMFPVGPRLPLAAIQ 735 Query: 521 XXXXXXXNV---------NTPRAMLRSVSGTRSGL 444 N+ + MLRSVSG SGL Sbjct: 736 PSSSAPSNIMYNASGNSQPSLNQMLRSVSGPSSGL 770