BLASTX nr result

ID: Panax21_contig00000105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000105
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...   125   2e-26
emb|CBI37242.3| unnamed protein product [Vitis vinifera]              120   1e-24
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   120   1e-24
ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-23
ref|XP_003625468.1| CLIP-associating protein [Medicago truncatul...   110   7e-22

>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
            gi|223539723|gb|EEF41305.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1384

 Score =  125 bits (315), Expect = 2e-26
 Identities = 66/105 (62%), Positives = 78/105 (74%)
 Frame = -2

Query: 1341 PFFRICLSIHIHADACYDRPINVMIERIEPKHRPSDGLVSTYTAGDIKPANLNPKRSSPK 1162
            P FR  L  H H      + IN  +E+IEP+ RPSDG    +  G++KP NLNPKRSSPK
Sbjct: 130  PQFRDELQRH-HLPMSMMKDINARLEKIEPQMRPSDGPTGNFATGEMKPMNLNPKRSSPK 188

Query: 1161 AKSSTREVSLFIGDSDVTEKPVEPIKV*YEKELIREFEKIASILV 1027
            AKS+TREVSLF G+SDVTEKP+EP+KV  EKELIREFEK+AS LV
Sbjct: 189  AKSTTREVSLFGGESDVTEKPIEPVKVYSEKELIREFEKVASTLV 233


>emb|CBI37242.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  120 bits (300), Expect = 1e-24
 Identities = 64/105 (60%), Positives = 77/105 (73%)
 Frame = -2

Query: 1341 PFFRICLSIHIHADACYDRPINVMIERIEPKHRPSDGLVSTYTAGDIKPANLNPKRSSPK 1162
            P FR  L  H H      R IN+ +ERIEPK R SDGLV  Y A ++KP  LNPK+SSPK
Sbjct: 7    PQFRDELQRH-HLPTSMLRDINIRLERIEPKIRSSDGLVGNYGAVEVKPVGLNPKKSSPK 65

Query: 1161 AKSSTREVSLFIGDSDVTEKPVEPIKV*YEKELIREFEKIASILV 1027
            AK+STRE+SLF  ++D+TEKP++PIKV  EKEL+RE EKIAS LV
Sbjct: 66   AKNSTREMSLFGAENDITEKPIDPIKVYSEKELVREIEKIASTLV 110


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  120 bits (300), Expect = 1e-24
 Identities = 64/105 (60%), Positives = 77/105 (73%)
 Frame = -2

Query: 1341 PFFRICLSIHIHADACYDRPINVMIERIEPKHRPSDGLVSTYTAGDIKPANLNPKRSSPK 1162
            P FR  L  H H      R IN+ +ERIEPK R SDGLV  Y A ++KP  LNPK+SSPK
Sbjct: 192  PQFRDELQRH-HLPTSMLRDINIRLERIEPKIRSSDGLVGNYGAVEVKPVGLNPKKSSPK 250

Query: 1161 AKSSTREVSLFIGDSDVTEKPVEPIKV*YEKELIREFEKIASILV 1027
            AK+STRE+SLF  ++D+TEKP++PIKV  EKEL+RE EKIAS LV
Sbjct: 251  AKNSTREMSLFGAENDITEKPIDPIKVYSEKELVREIEKIASTLV 295


>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
            predicted protein [Populus trichocarpa]
          Length = 1426

 Score =  114 bits (284), Expect = 8e-23
 Identities = 63/105 (60%), Positives = 76/105 (72%)
 Frame = -2

Query: 1341 PFFRICLSIHIHADACYDRPINVMIERIEPKHRPSDGLVSTYTAGDIKPANLNPKRSSPK 1162
            P FR  L  H H      + IN  +ERIEP+ RPSDGL   +   ++KP +L+ K+SSPK
Sbjct: 192  PQFRDELHRH-HLPNSMMKDINARLERIEPQVRPSDGLGGNFAPVEMKPTSLHSKKSSPK 250

Query: 1161 AKSSTREVSLFIGDSDVTEKPVEPIKV*YEKELIREFEKIASILV 1027
            AKSSTRE+SLF  +SDVTEKP+EPIKV  EKELIREFEKIA+ LV
Sbjct: 251  AKSSTREISLFGAESDVTEKPIEPIKVYSEKELIREFEKIAATLV 295


>ref|XP_003625468.1| CLIP-associating protein [Medicago truncatula]
            gi|355500483|gb|AES81686.1| CLIP-associating protein
            [Medicago truncatula]
          Length = 341

 Score =  110 bits (276), Expect = 7e-22
 Identities = 55/87 (63%), Positives = 69/87 (79%)
 Frame = -2

Query: 1287 RPINVMIERIEPKHRPSDGLVSTYTAGDIKPANLNPKRSSPKAKSSTREVSLFIGDSDVT 1108
            + IN  +E I+PK R SDG+ S Y  G+IK +N+NPK+SSPKAKSS+RE SLF  + DVT
Sbjct: 213  KDINARLEGIQPKVRSSDGIPSGYITGEIKTSNVNPKKSSPKAKSSSREASLFGAEGDVT 272

Query: 1107 EKPVEPIKV*YEKELIREFEKIASILV 1027
            EKPV+PIK+  +KEL+RE EKIASILV
Sbjct: 273  EKPVDPIKIYSDKELVREIEKIASILV 299


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