BLASTX nr result

ID: Panax21_contig00000104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000104
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528238.1| protein with unknown function [Ricinus commu...   323   1e-86
emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia fab...   322   2e-86
ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [...   318   4e-85
ref|XP_002323139.1| predicted protein [Populus trichocarpa] gi|2...   316   1e-84
ref|XP_002307897.1| predicted protein [Populus trichocarpa] gi|2...   315   3e-84

>ref|XP_002528238.1| protein with unknown function [Ricinus communis]
           gi|223532355|gb|EEF34153.1| protein with unknown
           function [Ricinus communis]
          Length = 223

 Score =  323 bits (827), Expect = 1e-86
 Identities = 163/179 (91%), Positives = 171/179 (95%)
 Frame = +3

Query: 3   GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 182
           GKSNLLARFARDEFYPNSKSTIGVEFQTQKM+INGKEVKAQIWDTAGQERFRAVTSAYYR
Sbjct: 26  GKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYR 85

Query: 183 GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDVREVSTAEGKSL 362
           GAVGALLVYDISRRQTFDS+G+WLNELHTHSDMNVVTILVGNKSDLKD REVSTAEGK+L
Sbjct: 86  GAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDLKDAREVSTAEGKAL 145

Query: 363 AETQGLFFMETSALDSSNVTAAFQTVVKEIYNILSRKVIQSQEPKQQEPWMGNGKTVVL 539
           AETQ LFFMETSALDSSNVTAAFQTVV+EIYNILSRKV+ ++  KQ  P MGNGKTVVL
Sbjct: 146 AETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMSNEFNKQDAPLMGNGKTVVL 204


>emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
           gi|1098296|prf||2115367D small GTP-binding protein
          Length = 223

 Score =  322 bits (825), Expect = 2e-86
 Identities = 165/180 (91%), Positives = 170/180 (94%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 182
           GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR
Sbjct: 26  GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 85

Query: 183 GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDVREVSTAEGKSL 362
           GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD REV T EGK+L
Sbjct: 86  GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVPTPEGKAL 145

Query: 363 AETQGLFFMETSALDSSNVTAAFQTVVKEIYNILSRKVIQSQEPKQQE-PWMGNGKTVVL 539
           AE QGLFFMETSALDSSNV +AFQTVVKEIYNILSRKV+ SQE K+Q+ PW  NGKTVVL
Sbjct: 146 AEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKVMMSQELKKQDTPWTENGKTVVL 205


>ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
           gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY
           PROTEIN: ras-related protein RABA5a-like [Cucumis
           sativus]
          Length = 224

 Score =  318 bits (814), Expect = 4e-85
 Identities = 163/180 (90%), Positives = 170/180 (94%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 182
           GKSNLLARFARDEFYPNSKSTIGVEFQTQK+EINGKE+KAQIWDTAGQERFRAVTSAYYR
Sbjct: 26  GKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIKAQIWDTAGQERFRAVTSAYYR 85

Query: 183 GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDVREVSTAEGKSL 362
           GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD REV TAEGKSL
Sbjct: 86  GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVPTAEGKSL 145

Query: 363 AETQGLFFMETSALDSSNVTAAFQTVVKEIYNILSRKVIQSQEPKQQE-PWMGNGKTVVL 539
           AE QGLFF+ETSALDSSNVT AFQTVVKEIYNILSRKV+ SQE K+Q+  WM NGKT V+
Sbjct: 146 AEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISQELKKQDVSWMENGKTTVV 205


>ref|XP_002323139.1| predicted protein [Populus trichocarpa] gi|222867769|gb|EEF04900.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  316 bits (810), Expect = 1e-84
 Identities = 163/180 (90%), Positives = 167/180 (92%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 182
           GKSNLLARFARDEFYPNSKSTIGVEFQTQKM+INGKE+KAQIWDTAGQERFRAVTSAYYR
Sbjct: 26  GKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRAVTSAYYR 85

Query: 183 GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDVREVSTAEGKSL 362
           GAVGALLVYDISRRQTFDS+GRWLNELHTHSDMNVVTILVGNKSDLKD REV T EGK L
Sbjct: 86  GAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKSDLKDAREVPTVEGKDL 145

Query: 363 AETQGLFFMETSALDSSNVTAAFQTVVKEIYNILSRKVIQSQE-PKQQEPWMGNGKTVVL 539
           AE QGLFFMETSALDSSNV AAFQTVVKEIYNILSRKVI SQE  K   P +GNGKTVVL
Sbjct: 146 AEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVILSQELNKPGAPELGNGKTVVL 205


>ref|XP_002307897.1| predicted protein [Populus trichocarpa] gi|222853873|gb|EEE91420.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  315 bits (807), Expect = 3e-84
 Identities = 162/180 (90%), Positives = 170/180 (94%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 182
           GKSNLLARFAR+EFYP+SKSTIGVEFQTQKM+INGKE+KAQIWDTAGQERFRAVTSAYYR
Sbjct: 26  GKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRAVTSAYYR 85

Query: 183 GAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDVREVSTAEGKSL 362
           GAVGALLVYDISRRQTFDSIG+WLNELHTHSDMNVVTILVGNKSDLKD REVSTAEGK+L
Sbjct: 86  GAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTILVGNKSDLKDAREVSTAEGKAL 145

Query: 363 AETQGLFFMETSALDSSNVTAAFQTVVKEIYNILSRKVIQSQE-PKQQEPWMGNGKTVVL 539
           AE QGLFFMETSALDSSNV AAFQTVVKEIYNILSRKV+ SQE  K   P +GNGKTVVL
Sbjct: 146 AEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELNKPGAPELGNGKTVVL 205


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