BLASTX nr result

ID: Panax21_contig00000101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000101
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17596.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   105   3e-21
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   105   3e-21
gb|AFK42835.1| unknown [Lotus japonicus]                              104   6e-21
ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycin...   104   6e-21

>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/70 (78%), Positives = 57/70 (81%)
 Frame = -3

Query: 439 KMPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCTKYLYTLCVFDSEKAEKLKQS 260
           KMPKQIHEIKDFLLTARRKDARS             VRC+KYLYTLCVFDSEKA+KLKQS
Sbjct: 58  KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 117

Query: 259 LPPGLSVQDL 230
           LPPGLSVQDL
Sbjct: 118 LPPGLSVQDL 127


>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/69 (78%), Positives = 56/69 (81%)
 Frame = -3

Query: 436 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCTKYLYTLCVFDSEKAEKLKQSL 257
           MPKQIHEIKDFLLTARRKDARS             VRC+KYLYTLCVFDSEKA+KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 256 PPGLSVQDL 230
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/72 (75%), Positives = 57/72 (79%)
 Frame = -3

Query: 445 KPKMPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCTKYLYTLCVFDSEKAEKLK 266
           K  MPKQIHEIKDFLLTARRKDARS             VRC+KYLYTLCVFDSEKA+KLK
Sbjct: 29  KSTMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 88

Query: 265 QSLPPGLSVQDL 230
           QSLPPGLSVQD+
Sbjct: 89  QSLPPGLSVQDV 100


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/69 (76%), Positives = 56/69 (81%)
 Frame = -3

Query: 436 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCTKYLYTLCVFDSEKAEKLKQSL 257
           MPKQIHEIKDFLLTARRKDARS             VRC+KYLYTLCVFD+EKA+KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 256 PPGLSVQDL 230
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycine max]
          Length = 69

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/69 (76%), Positives = 56/69 (81%)
 Frame = -3

Query: 436 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCTKYLYTLCVFDSEKAEKLKQSL 257
           MPKQIHEIKDFLLTARRKDARS             VRC+KYLYTLCVFDSEKA+KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 256 PPGLSVQDL 230
           PPGLSVQD+
Sbjct: 61  PPGLSVQDV 69


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