BLASTX nr result

ID: Panax21_contig00000097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000097
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32241.3| unnamed protein product [Vitis vinifera]              385   e-105
ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-l...   379   e-103
ref|XP_002321026.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002520662.1| peroxisome assembly factor-2, putative [Rici...   362   7e-98
ref|XP_003624945.1| Peroxisomal biogenesis factor [Medicago trun...   337   2e-90

>emb|CBI32241.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score =  385 bits (990), Expect = e-105
 Identities = 209/306 (68%), Positives = 244/306 (79%), Gaps = 3/306 (0%)
 Frame = -1

Query: 911  FVPLQGDTVKILASILTPPLCPSALSSKFRVAVLLNGLPGCGKRTVVKYVARRLGLHVVE 732
            F+PLQ DTVK+LASILTP +CPS L+SK RV VLL GL G GKRTV+++VA+RLGLH+VE
Sbjct: 348  FMPLQADTVKMLASILTPLVCPSTLASKLRVTVLLYGLAGAGKRTVIRHVAQRLGLHIVE 407

Query: 731  YSCHTLMASSERKTSNALAQAFTTARKYSPTILLLRHFDVFRNMASSNEGSAHDQVGINS 552
            YSCH LM+S+ERKTS ALAQ F TA +YSPTILLLRHFDVFR    + EGS++DQVGI S
Sbjct: 408  YSCHNLMSSAERKTSVALAQVFNTAHRYSPTILLLRHFDVFR----TQEGSSNDQVGIAS 463

Query: 551  EVASVVKEFTEPVGEDVVNLYDEETYSDY---GAERTSRHPVLLIAAADSSEGLPPAIRR 381
            EVASV+++FTEPV ED     +++  SD+    AE+  RH VLL+AAADSSEGLPP IRR
Sbjct: 464  EVASVIRKFTEPVIEDEDIYSEKKLTSDFQLKDAEKIKRHQVLLVAAADSSEGLPPTIRR 523

Query: 380  CFSHEVSMGPLTEEQRVEMLSQLLQRVSELLPNIASEDLKKDIVGQTSGYLPRDMRALIA 201
            CFSHE+ MGPLTEEQR +MLSQ LQ +SELLPN  SED  KDIVGQTSG++ RDMRALIA
Sbjct: 524  CFSHEIRMGPLTEEQRAKMLSQSLQSISELLPNTDSEDFIKDIVGQTSGFMLRDMRALIA 583

Query: 200  DAGANMIPRDNIQFDKGEPGNLGENSSLGSKPVQDDKSYNDEPGVLGKDDLVKALERSKK 21
            D GAN++PR   Q +K EPG  G ++SL  K VQD KS  + P VLGKDDL KALERSKK
Sbjct: 584  DTGANLMPR--CQTNKLEPG--GTDNSLRFKAVQDTKSCEEAPQVLGKDDLAKALERSKK 639

Query: 20   RNASAL 3
            RNASAL
Sbjct: 640  RNASAL 645


>ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-like [Vitis vinifera]
          Length = 935

 Score =  379 bits (972), Expect = e-103
 Identities = 209/313 (66%), Positives = 244/313 (77%), Gaps = 10/313 (3%)
 Frame = -1

Query: 911  FVPLQGDTVKILASILTPPLCPSALSSKFRVAVLLNGLPGCGKRTVVKYVARRLGLHVVE 732
            F+PLQ DTVK+LASILTP +CPS L+SK RV VLL GL G GKRTV+++VA+RLGLH+VE
Sbjct: 348  FMPLQADTVKMLASILTPLVCPSTLASKLRVTVLLYGLAGAGKRTVIRHVAQRLGLHIVE 407

Query: 731  YSCHTLMASSERKTSNALAQAFTTARKYSPTILLLRHFDVFRNMASSNEGSAHDQVGINS 552
            YSCH LM+S+ERKTS ALAQ F TA +YSPTILLLRHFDVFR    + EGS++DQVGI S
Sbjct: 408  YSCHNLMSSAERKTSVALAQVFNTAHRYSPTILLLRHFDVFR----TQEGSSNDQVGIAS 463

Query: 551  EVASVVKEFTEPVGEDVVNLYDEETYSDY---GAERTSRHPVLLIAAADSSEGLPPAIRR 381
            EVASV+++FTEPV ED     +++  SD+    AE+  RH VLL+AAADSSEGLPP IRR
Sbjct: 464  EVASVIRKFTEPVIEDEDIYSEKKLTSDFQLKDAEKIKRHQVLLVAAADSSEGLPPTIRR 523

Query: 380  CFSHEVSMGPLTEEQRVEMLSQLLQRVSELLPN-------IASEDLKKDIVGQTSGYLPR 222
            CFSHE+ MGPLTEEQR +MLSQ LQ +SELLPN         SED  KDIVGQTSG++ R
Sbjct: 524  CFSHEIRMGPLTEEQRAKMLSQSLQSISELLPNSDNCFLQTDSEDFIKDIVGQTSGFMLR 583

Query: 221  DMRALIADAGANMIPRDNIQFDKGEPGNLGENSSLGSKPVQDDKSYNDEPGVLGKDDLVK 42
            DMRALIAD GAN++PR   Q +K EPG  G ++SL  K VQD KS  + P VLGKDDL K
Sbjct: 584  DMRALIADTGANLMPR--CQTNKLEPG--GTDNSLRFKAVQDTKSCEEAPQVLGKDDLAK 639

Query: 41   ALERSKKRNASAL 3
            ALERSKKRNASAL
Sbjct: 640  ALERSKKRNASAL 652


>ref|XP_002321026.1| predicted protein [Populus trichocarpa] gi|222861799|gb|EEE99341.1|
            predicted protein [Populus trichocarpa]
          Length = 930

 Score =  376 bits (966), Expect = e-102
 Identities = 204/306 (66%), Positives = 243/306 (79%), Gaps = 3/306 (0%)
 Frame = -1

Query: 911  FVPLQGDTVKILASILTPPLCPSALSSKFRVAVLLNGLPGCGKRTVVKYVARRLGLHVVE 732
            F PLQGDTVK LASILTPPLCPSALSSKFRVAVLL GL GCGKRTVV++VARRLG+HVVE
Sbjct: 338  FAPLQGDTVKTLASILTPPLCPSALSSKFRVAVLLYGLAGCGKRTVVRHVARRLGIHVVE 397

Query: 731  YSCHTLMASSERKTSNALAQAFTTARKYSPTILLLRHFDVFRNMASSNEGSAHDQVGINS 552
            +SCH L ASS+RKTS ALAQAF TA++YSPTILLLRHFD FRN+  S+EGS +DQVG++S
Sbjct: 398  FSCHNLTASSDRKTSVALAQAFHTAQRYSPTILLLRHFDFFRNL-MSHEGSPNDQVGLSS 456

Query: 551  EVASVVKEFTEPVGEDVVNLYDEETYSDYGAERTS---RHPVLLIAAADSSEGLPPAIRR 381
            EVASV++EFTEPV ED  N Y  E  +DY   + +   RH VLL+AAA+SSEGLPP +RR
Sbjct: 457  EVASVIREFTEPVSEDEDN-YSGEKSNDYFLVKDTGKIRHQVLLVAAAESSEGLPPTVRR 515

Query: 380  CFSHEVSMGPLTEEQRVEMLSQLLQRVSELLPNIASEDLKKDIVGQTSGYLPRDMRALIA 201
            CFSHE+SMGPLTEE R EMLSQ LQ     L     ED  KD+VGQTSG++PRD+ ALIA
Sbjct: 516  CFSHEISMGPLTEEHRAEMLSQSLQSDGCFL-QTGIEDAIKDMVGQTSGFMPRDLHALIA 574

Query: 200  DAGANMIPRDNIQFDKGEPGNLGENSSLGSKPVQDDKSYNDEPGVLGKDDLVKALERSKK 21
            DAGA+++ + N+Q DK EP +L  NSSLG + +Q ++S N  P  + K+ L KAL+RSKK
Sbjct: 575  DAGASLVSKVNVQVDKDEPKDL--NSSLGGQSLQKNESSNYMPQAVEKEYLAKALDRSKK 632

Query: 20   RNASAL 3
            RNA+AL
Sbjct: 633  RNATAL 638


>ref|XP_002520662.1| peroxisome assembly factor-2, putative [Ricinus communis]
            gi|223540047|gb|EEF41624.1| peroxisome assembly factor-2,
            putative [Ricinus communis]
          Length = 920

 Score =  362 bits (929), Expect = 7e-98
 Identities = 203/306 (66%), Positives = 236/306 (77%), Gaps = 3/306 (0%)
 Frame = -1

Query: 911  FVPLQGDTVKILASILTPPLCPSALSSKFRVAVLLNGLPGCGKRTVVKYVARRLGLHVVE 732
            F PLQ DTVK LAS+L PPLCPSALSSKFRV+VLL G  GCGKRTVV+YV RRLGLHVVE
Sbjct: 338  FAPLQKDTVKTLASVLAPPLCPSALSSKFRVSVLLYGPAGCGKRTVVRYVCRRLGLHVVE 397

Query: 731  YSCHTLMASSERKTSNALAQAFTTARKYSPTILLLRHFDVFRNMASSNEGSAHDQVGINS 552
            +SCH LMA  ++  S ALAQAF TA++YSPTILLLRHFDVFRN+  S+EGS +DQVG+ S
Sbjct: 398  FSCHNLMA--DKNASIALAQAFRTAQRYSPTILLLRHFDVFRNLI-SHEGSPNDQVGLTS 454

Query: 551  EVASVVKEFTEPVGEDVVNLYDEETYSDYGAE---RTSRHPVLLIAAADSSEGLPPAIRR 381
            EVASV++EFTEPV ED  N  DE+  +D  A+     SR  VLL+AAA+SSEGLPP +RR
Sbjct: 455  EVASVMREFTEPVAEDDDNYSDEKLNNDLSAKDAANVSRGQVLLVAAAESSEGLPPTVRR 514

Query: 380  CFSHEVSMGPLTEEQRVEMLSQLLQRVSELLPNIASEDLKKDIVGQTSGYLPRDMRALIA 201
            CFSHE+SMG LTEEQRVEM+SQLLQ  S  L     ED+ KDIVGQTSG++PRD+ ALIA
Sbjct: 515  CFSHEISMGSLTEEQRVEMVSQLLQSDSCFL-QTEVEDVAKDIVGQTSGFMPRDLHALIA 573

Query: 200  DAGANMIPRDNIQFDKGEPGNLGENSSLGSKPVQDDKSYNDEPGVLGKDDLVKALERSKK 21
            DAGA++I R NIQ D  EP     NSS G K VQ+ +S N    ++GK  L +ALERSKK
Sbjct: 574  DAGASLITRGNIQAD--EPELKDVNSSTGFKSVQEHESCNSIAQMMGKVYLPRALERSKK 631

Query: 20   RNASAL 3
            RNASAL
Sbjct: 632  RNASAL 637


>ref|XP_003624945.1| Peroxisomal biogenesis factor [Medicago truncatula]
            gi|355499960|gb|AES81163.1| Peroxisomal biogenesis factor
            [Medicago truncatula]
          Length = 952

 Score =  337 bits (865), Expect = 2e-90
 Identities = 193/305 (63%), Positives = 225/305 (73%), Gaps = 3/305 (0%)
 Frame = -1

Query: 908  VPLQGDTVKILASILTPPLCPSALSSKFRVAVLLNGLPGCGKRTVVKYVARRLGLHVVEY 729
            VPLQ DTVKILASIL P LCPSALSSKFRV+VLL GL GCGKRTVV+YVARRLGLHVVEY
Sbjct: 360  VPLQRDTVKILASILAPTLCPSALSSKFRVSVLLYGLEGCGKRTVVRYVARRLGLHVVEY 419

Query: 728  SCHTLMASSERKTSNALAQAFTTARKYSPTILLLRHFDVFRNMASSNEGSAHDQVGINSE 549
            +CH L  S   +TS ALAQAF  A++YSPTILLLRHF+VFR+ + S E S +DQ G  SE
Sbjct: 420  NCHDLTGSD--RTSVALAQAFKAAQRYSPTILLLRHFEVFRD-SQSPEVSQNDQRGNTSE 476

Query: 548  VASVVKEFTEPVGE--DVVNLYDEE-TYSDYGAERTSRHPVLLIAAADSSEGLPPAIRRC 378
            VASV++ FTEPVGE  D  +L      + +  +E+TS H VLLIAAADSSEGLP +IRRC
Sbjct: 477  VASVIRRFTEPVGEHGDSNSLVKSNGQFVEKNSEKTSGHQVLLIAAADSSEGLPASIRRC 536

Query: 377  FSHEVSMGPLTEEQRVEMLSQLLQRVSELLPNIASEDLKKDIVGQTSGYLPRDMRALIAD 198
            FSHE+ MGPLTEEQR EML   LQ V  L  N   E   K+IVGQTSG++PRDM ALIAD
Sbjct: 537  FSHEIKMGPLTEEQRAEMLLHSLQNVYGLHSNTDLEGFVKEIVGQTSGFMPRDMCALIAD 596

Query: 197  AGANMIPRDNIQFDKGEPGNLGENSSLGSKPVQDDKSYNDEPGVLGKDDLVKALERSKKR 18
            AGAN+ P  N++  K +P +   +SSL S+  +D+          GK+DLV ALERSKKR
Sbjct: 597  AGANLFPGSNVEVGKDQPED--SDSSLISEVTEDNNESEVSARKPGKEDLVNALERSKKR 654

Query: 17   NASAL 3
            NASAL
Sbjct: 655  NASAL 659


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