BLASTX nr result

ID: Panax21_contig00000084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000084
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW02789.1| aluminum-induced protein [Codonopsis lanceolata]        80   1e-12
gb|AAK50814.1|AF363286_1 aluminium induced protein [Avicennia ma...    80   1e-12
gb|AAQ74889.1| Al-induced protein [Gossypium hirsutum]                 77   7e-12
ref|XP_002311836.1| predicted protein [Populus trichocarpa] gi|1...    76   1e-11
ref|XP_002280658.1| PREDICTED: stem-specific protein TSJT1 [Viti...    75   3e-11

>gb|AAW02789.1| aluminum-induced protein [Codonopsis lanceolata]
          Length = 236

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +3

Query: 3   PQGCFFSTEDGQLRSYENPKNKITAVFATEEEIWGAKYMVEGP 131
           PQGCF+ST  G+LR YENPKNKITAV ATEEEIWGAK+MVEGP
Sbjct: 187 PQGCFYSTAVGELRCYENPKNKITAVPATEEEIWGAKFMVEGP 229



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = +2

Query: 92  GRNLGS*IHGGRASXEDGQLRSYENPKNKITAVFATEEEIWGAKYMV 232
           G++L S   G   S   G+LR YENPKNKITAV ATEEEIWGAK+MV
Sbjct: 180 GKSLASFPQGCFYSTAVGELRCYENPKNKITAVPATEEEIWGAKFMV 226


>gb|AAK50814.1|AF363286_1 aluminium induced protein [Avicennia marina]
          Length = 236

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +3

Query: 3   PQGCFFSTEDGQLRSYENPKNKITAVFATEEEIWGAKYMVEGP 131
           PQGCFFST  G++RSYENPKNKITAV A EEEIWGAK+MVEGP
Sbjct: 187 PQGCFFSTAVGEIRSYENPKNKITAVPAQEEEIWGAKFMVEGP 229



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = +2

Query: 92  GRNLGS*IHGGRASXEDGQLRSYENPKNKITAVFATEEEIWGAKYMV 232
           G++L S   G   S   G++RSYENPKNKITAV A EEEIWGAK+MV
Sbjct: 180 GKSLASFPQGCFFSTAVGEIRSYENPKNKITAVPAQEEEIWGAKFMV 226


>gb|AAQ74889.1| Al-induced protein [Gossypium hirsutum]
          Length = 236

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 36/44 (81%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   PQGCFFSTEDGQLRSYENPKNKITAVFATEEEIWGAKYMVEGPA 134
           PQGCF+ST  G LRSYENPKNKITAV A EEEIWGAK+ VEGPA
Sbjct: 187 PQGCFYSTAVGGLRSYENPKNKITAVPAEEEEIWGAKFKVEGPA 230


>ref|XP_002311836.1| predicted protein [Populus trichocarpa] gi|118485817|gb|ABK94756.1|
           unknown [Populus trichocarpa]
           gi|222851656|gb|EEE89203.1| predicted protein [Populus
           trichocarpa]
          Length = 236

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   PQGCFFSTEDGQLRSYENPKNKITAVFATEEEIWGAKYMVEGPA 134
           PQGCFFST  G+LRS+ENPKNKITAV A EEEIWGA + VEGPA
Sbjct: 187 PQGCFFSTTIGELRSFENPKNKITAVPAKEEEIWGATFKVEGPA 230


>ref|XP_002280658.1| PREDICTED: stem-specific protein TSJT1 [Vitis vinifera]
           gi|297736991|emb|CBI26192.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   PQGCFFSTEDGQLRSYENPKNKITAVFATEEEIWGAKYMVEGPA 134
           PQGCFFST  G+LRS+ENPKNKITAV A +EEIWGA + VEGPA
Sbjct: 187 PQGCFFSTAVGELRSFENPKNKITAVPAPDEEIWGATFKVEGPA 230


Top