BLASTX nr result

ID: Panax21_contig00000073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000073
         (1898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicot...   270   2e-91
gb|AGC54441.1| 26S proteasome ATPase regulatory subunit 6 [Capsi...   270   2e-91
dbj|BAJ99861.1| predicted protein [Hordeum vulgare subsp. vulgar...   270   5e-91
ref|XP_002285273.1| PREDICTED: 26S protease regulatory subunit 8...   270   5e-91
ref|XP_003571095.1| PREDICTED: 26S protease regulatory subunit 8...   269   1e-90

>gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicotiana tabacum]
          Length = 417

 Score =  270 bits (690), Expect(3) = 2e-91
 Identities = 137/138 (99%), Positives = 137/138 (99%)
 Frame = -2

Query: 415 DMIGGLDQQIKEIKEVI*LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 236
           DMIGGLDQQIKEIKEVI LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
Sbjct: 159 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 218

Query: 235 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 56
           CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS
Sbjct: 219 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 278

Query: 55  EVQRTMLELLNQLDGFEA 2
           EVQRTMLELLNQLDGFEA
Sbjct: 279 EVQRTMLELLNQLDGFEA 296



 Score = 62.0 bits (149), Expect(3) = 2e-91
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 585 VRMLKEELHLLQEPGSYVGEVVKVMGKSEVLVK 487
           VRMLKEEL LLQEPGSYVGEVVKVMGKS+VLVK
Sbjct: 66  VRMLKEELQLLQEPGSYVGEVVKVMGKSKVLVK 98



 Score = 53.9 bits (128), Expect(3) = 2e-91
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 488 NKVDPLVNLMKVEKVPDSTYDMIGGHD 408
           +KVDPLVNLMKVEKVPDSTYDMIGG D
Sbjct: 139 SKVDPLVNLMKVEKVPDSTYDMIGGLD 165


>gb|AGC54441.1| 26S proteasome ATPase regulatory subunit 6 [Capsicum annuum]
          Length = 417

 Score =  270 bits (690), Expect(3) = 2e-91
 Identities = 137/138 (99%), Positives = 137/138 (99%)
 Frame = -2

Query: 415 DMIGGLDQQIKEIKEVI*LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 236
           DMIGGLDQQIKEIKEVI LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
Sbjct: 159 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 218

Query: 235 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 56
           CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS
Sbjct: 219 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 278

Query: 55  EVQRTMLELLNQLDGFEA 2
           EVQRTMLELLNQLDGFEA
Sbjct: 279 EVQRTMLELLNQLDGFEA 296



 Score = 62.0 bits (149), Expect(3) = 2e-91
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 585 VRMLKEELHLLQEPGSYVGEVVKVMGKSEVLVK 487
           VRMLKEEL LLQEPGSYVGEVVKVMGKS+VLVK
Sbjct: 66  VRMLKEELQLLQEPGSYVGEVVKVMGKSKVLVK 98



 Score = 53.9 bits (128), Expect(3) = 2e-91
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 488 NKVDPLVNLMKVEKVPDSTYDMIGGHD 408
           +KVDPLVNLMKVEKVPDSTYDMIGG D
Sbjct: 139 SKVDPLVNLMKVEKVPDSTYDMIGGLD 165


>dbj|BAJ99861.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326520663|dbj|BAJ92695.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 423

 Score =  270 bits (690), Expect(3) = 5e-91
 Identities = 137/138 (99%), Positives = 137/138 (99%)
 Frame = -2

Query: 415 DMIGGLDQQIKEIKEVI*LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 236
           DMIGGLDQQIKEIKEVI LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
Sbjct: 165 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 224

Query: 235 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 56
           CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS
Sbjct: 225 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 284

Query: 55  EVQRTMLELLNQLDGFEA 2
           EVQRTMLELLNQLDGFEA
Sbjct: 285 EVQRTMLELLNQLDGFEA 302



 Score = 60.8 bits (146), Expect(3) = 5e-91
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -3

Query: 585 VRMLKEELHLLQEPGSYVGEVVKVMGKSEVLVK 487
           VRML+EEL LLQEPGSYVGEVVKVMGKS+VLVK
Sbjct: 72  VRMLREELQLLQEPGSYVGEVVKVMGKSKVLVK 104



 Score = 53.9 bits (128), Expect(3) = 5e-91
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 488 NKVDPLVNLMKVEKVPDSTYDMIGGHD 408
           +KVDPLVNLMKVEKVPDSTYDMIGG D
Sbjct: 145 SKVDPLVNLMKVEKVPDSTYDMIGGLD 171


>ref|XP_002285273.1| PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis
           vinifera] gi|297743378|emb|CBI36245.3| unnamed protein
           product [Vitis vinifera]
          Length = 417

 Score =  270 bits (690), Expect(3) = 5e-91
 Identities = 137/138 (99%), Positives = 137/138 (99%)
 Frame = -2

Query: 415 DMIGGLDQQIKEIKEVI*LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 236
           DMIGGLDQQIKEIKEVI LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
Sbjct: 159 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 218

Query: 235 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 56
           CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS
Sbjct: 219 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 278

Query: 55  EVQRTMLELLNQLDGFEA 2
           EVQRTMLELLNQLDGFEA
Sbjct: 279 EVQRTMLELLNQLDGFEA 296



 Score = 60.8 bits (146), Expect(3) = 5e-91
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -3

Query: 585 VRMLKEELHLLQEPGSYVGEVVKVMGKSEVLVK 487
           VRML+EEL LLQEPGSYVGEVVKVMGKS+VLVK
Sbjct: 66  VRMLREELQLLQEPGSYVGEVVKVMGKSKVLVK 98



 Score = 53.9 bits (128), Expect(3) = 5e-91
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 488 NKVDPLVNLMKVEKVPDSTYDMIGGHD 408
           +KVDPLVNLMKVEKVPDSTYDMIGG D
Sbjct: 139 SKVDPLVNLMKVEKVPDSTYDMIGGLD 165


>ref|XP_003571095.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
           [Brachypodium distachyon]
          Length = 512

 Score =  269 bits (687), Expect(3) = 1e-90
 Identities = 136/138 (98%), Positives = 137/138 (99%)
 Frame = -2

Query: 415 DMIGGLDQQIKEIKEVI*LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 236
           DMIGGLDQQIKEIKEVI LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
Sbjct: 254 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 313

Query: 235 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 56
           CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG+GNGDS
Sbjct: 314 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTGNGDS 373

Query: 55  EVQRTMLELLNQLDGFEA 2
           EVQRTMLELLNQLDGFEA
Sbjct: 374 EVQRTMLELLNQLDGFEA 391



 Score = 60.8 bits (146), Expect(3) = 1e-90
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -3

Query: 585 VRMLKEELHLLQEPGSYVGEVVKVMGKSEVLVK 487
           VRML+EEL LLQEPGSYVGEVVKVMGKS+VLVK
Sbjct: 161 VRMLREELQLLQEPGSYVGEVVKVMGKSKVLVK 193



 Score = 53.9 bits (128), Expect(3) = 1e-90
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 488 NKVDPLVNLMKVEKVPDSTYDMIGGHD 408
           +KVDPLVNLMKVEKVPDSTYDMIGG D
Sbjct: 234 SKVDPLVNLMKVEKVPDSTYDMIGGLD 260


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