BLASTX nr result

ID: Panax21_contig00000071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000071
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510440.1| 26S protease regulatory subunit S10b, putati...    92   2e-32
ref|XP_002306121.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-32
ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidas...    92   3e-32
ref|XP_003544312.1| PREDICTED: 26S protease regulatory subunit 1...    92   3e-32
ref|XP_003544313.1| PREDICTED: 26S protease regulatory subunit 1...    92   3e-32

>ref|XP_002510440.1| 26S protease regulatory subunit S10b, putative [Ricinus communis]
           gi|223551141|gb|EEF52627.1| 26S protease regulatory
           subunit S10b, putative [Ricinus communis]
          Length = 399

 Score = 92.0 bits (227), Expect(2) = 2e-32
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +2

Query: 233 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 367
           LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 111 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 155



 Score = 72.0 bits (175), Expect(2) = 2e-32
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 127 VIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 234
           +IVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT
Sbjct: 75  LIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 110


>ref|XP_002306121.1| predicted protein [Populus trichocarpa] gi|222849085|gb|EEE86632.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 92.0 bits (227), Expect(2) = 2e-32
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +2

Query: 233 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 367
           LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI
Sbjct: 111 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 155



 Score = 72.0 bits (175), Expect(2) = 2e-32
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 127 VIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 234
           +IVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT
Sbjct: 75  LIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 110


>ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max]
          Length = 833

 Score = 91.7 bits (226), Expect(2) = 3e-32
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 233 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 367
           LTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESI
Sbjct: 545 LTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESI 589



 Score = 72.0 bits (175), Expect(2) = 3e-32
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 127 VIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 234
           +IVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT
Sbjct: 509 LIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 544


>ref|XP_003544312.1| PREDICTED: 26S protease regulatory subunit 10B homolog A-like
           isoform 1 [Glycine max]
          Length = 399

 Score = 91.7 bits (226), Expect(2) = 3e-32
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 233 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 367
           LTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESI
Sbjct: 111 LTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESI 155



 Score = 72.0 bits (175), Expect(2) = 3e-32
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 127 VIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 234
           +IVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT
Sbjct: 75  LIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 110


>ref|XP_003544313.1| PREDICTED: 26S protease regulatory subunit 10B homolog A-like
           isoform 2 [Glycine max]
          Length = 335

 Score = 91.7 bits (226), Expect(2) = 3e-32
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 233 LTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 367
           LTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESI
Sbjct: 111 LTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESI 155



 Score = 72.0 bits (175), Expect(2) = 3e-32
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +1

Query: 127 VIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 234
           +IVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT
Sbjct: 75  LIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTT 110


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