BLASTX nr result

ID: Panax21_contig00000039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000039
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65448.1| hypothetical protein VITISV_011426 [Vitis vinifera]   100   5e-19
ref|XP_002274750.1| PREDICTED: uncharacterized protein LOC100242...    99   8e-19
ref|NP_001235849.1| uncharacterized protein LOC100306494 [Glycin...    99   1e-18
ref|XP_004166993.1| PREDICTED: growth-regulating factor 9-like, ...    95   2e-17
ref|XP_004133902.1| PREDICTED: growth-regulating factor 9-like [...    95   2e-17

>emb|CAN65448.1| hypothetical protein VITISV_011426 [Vitis vinifera]
          Length = 552

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 55/124 (44%), Positives = 66/124 (53%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNRPTTTCSNKT 528
           PGRCRRTDGKKWRC K+VVPDQKYCERHMHRGR RSRKPVEA    S   RPT   S ++
Sbjct: 217 PGRCRRTDGKKWRCSKDVVPDQKYCERHMHRGRQRSRKPVEAPAIASHVTRPTFNSSMES 276

Query: 527 KQTIKSHDPADTNTKFPAPGSHQFKMPSFKRSNGFPXXXXXXXXXXANGKSRGNSNVFVN 348
           +        + T+     P S Q   PS   ++              N  ++  +N   N
Sbjct: 277 EN-------SKTDLTIAVPLSLQLMAPSSNNTSTGNNTATTTTTTTXNNNNQRETNFSGN 329

Query: 347 SVTS 336
             TS
Sbjct: 330 KQTS 333



 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENIS 567
           PGRCRRTDGKKWRC ++VVPDQKYC RHMHRG   ++K V  +++++
Sbjct: 467 PGRCRRTDGKKWRCSRDVVPDQKYCVRHMHRG---AKKHVGVSQSVA 510


>ref|XP_002274750.1| PREDICTED: uncharacterized protein LOC100242152 [Vitis vinifera]
           gi|296089087|emb|CBI38790.3| unnamed protein product
           [Vitis vinifera]
          Length = 402

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 50/88 (56%), Positives = 56/88 (63%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNRPTTTCSNKT 528
           PGRCRRTDGKKWRC K+VVPDQKYCERHMHRGR RSRKPVEA    S   RPT   S ++
Sbjct: 55  PGRCRRTDGKKWRCSKDVVPDQKYCERHMHRGRQRSRKPVEAPAIASHVTRPTFNSSMES 114

Query: 527 KQTIKSHDPADTNTKFPAPGSHQFKMPS 444
           +        + T+     P S Q   PS
Sbjct: 115 EN-------SKTDLTIAVPLSLQLMAPS 135



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENIS-----QFNRPTTT 543
           PGRCRRTDGKKWRC ++VVPDQKYC RHMHRG   ++K V  +++++       N    T
Sbjct: 301 PGRCRRTDGKKWRCSRDVVPDQKYCVRHMHRG---AKKHVGVSQSVAVSAAIHSNCRPPT 357

Query: 542 CSNKTKQTIKSHDPADTNTKFPAPGSHQ 459
             NKT+ +I      +TN     P + Q
Sbjct: 358 IPNKTRISIN----LNTNLSISIPANPQ 381


>ref|NP_001235849.1| uncharacterized protein LOC100306494 [Glycine max]
           gi|255628707|gb|ACU14698.1| unknown [Glycine max]
          Length = 257

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 51/93 (54%), Positives = 57/93 (61%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNRPTTTCSNKT 528
           P RCRRTDGKKWRCGKNVVP+QKYCERHMHRGR RSRKPVE     SQ N P       T
Sbjct: 87  PHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPVET----SQVNSPLA-----T 137

Query: 527 KQTIKSHDPADTNTKFPAPGSHQFKMPSFKRSN 429
           K   KSH    + T+F     +   +P    S+
Sbjct: 138 KPCSKSHTKPSSKTQFEISSPNLIAIPHIDTSS 170


>ref|XP_004166993.1| PREDICTED: growth-regulating factor 9-like, partial [Cucumis
           sativus]
          Length = 363

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/93 (52%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNR--------- 555
           PGRCRRTDGKKWRC +N VP QKYCERHMHRGR RSRKPVEA+EN S   R         
Sbjct: 18  PGRCRRTDGKKWRCSRNTVPHQKYCERHMHRGRQRSRKPVEASENESPSKRIQLNIPDRD 77

Query: 554 -------PTTTCSNKTKQTIKSHDPADTNTKFP 477
                  PT+T     K   K+H   +  T  P
Sbjct: 78  ARCTLDVPTSTICGNIK--TKNHSSCNFTTAIP 108



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNRPTTTCSNKT 528
           PGRCRRTDGKKWRC ++V+PDQKYC  HMHRG  +  KP++ A  ++       T     
Sbjct: 254 PGRCRRTDGKKWRCRRDVIPDQKYCALHMHRGSKKHLKPIQNAPVLAPCVASYGTMLPLV 313

Query: 527 KQTIKSHDPADTNT 486
              +   +PA  NT
Sbjct: 314 TTPLTKLEPATPNT 327


>ref|XP_004133902.1| PREDICTED: growth-regulating factor 9-like [Cucumis sativus]
          Length = 502

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/93 (52%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNR--------- 555
           PGRCRRTDGKKWRC +N VP QKYCERHMHRGR RSRKPVEA+EN S   R         
Sbjct: 157 PGRCRRTDGKKWRCSRNTVPHQKYCERHMHRGRQRSRKPVEASENESPSKRIQLNIPDRD 216

Query: 554 -------PTTTCSNKTKQTIKSHDPADTNTKFP 477
                  PT+T     K   K+H   +  T  P
Sbjct: 217 ARCTLDVPTSTICGNIK--TKNHSSCNFTTAIP 247



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -3

Query: 707 PGRCRRTDGKKWRCGKNVVPDQKYCERHMHRGRLRSRKPVEAAENISQFNRPTTTCSNKT 528
           PGRCRRTDGKKWRC ++V+PDQKYC  HMHRG  +  KP++ A  ++       T     
Sbjct: 393 PGRCRRTDGKKWRCRRDVIPDQKYCALHMHRGSKKHLKPIQNAPVLAPCVASYGTMLPLV 452

Query: 527 KQTIKSHDPADTNT 486
              +   +PA  NT
Sbjct: 453 TTPLTKLEPATPNT 466


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