BLASTX nr result

ID: Panax21_contig00000035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000035
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB29919.1| unknown [Solanum tuberosum]                            219   6e-55
ref|XP_002531488.1| serine/arginine rich splicing factor, putati...   214   2e-53
ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...   213   4e-53
ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cuc...   209   6e-52
ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216...   209   6e-52

>gb|ABB29919.1| unknown [Solanum tuberosum]
          Length = 258

 Score =  219 bits (557), Expect = 6e-55
 Identities = 105/112 (93%), Positives = 110/112 (98%)
 Frame = +3

Query: 87  MSHFGRAGPPDIKDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 266
           MSHFGR+GPPDIKDTYSLLVLN+TFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 267 FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERISKGRILEPVEK 422
           FVRYKY DEAQKAVEKLDGRVVDGREIMV+FAKYGPNAERI KGRILEPV++
Sbjct: 61  FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVQR 112


>ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528897|gb|EEF30895.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  214 bits (545), Expect = 2e-53
 Identities = 103/112 (91%), Positives = 108/112 (96%)
 Frame = +3

Query: 87  MSHFGRAGPPDIKDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 266
           MSHFGR+GPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 267 FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERISKGRILEPVEK 422
           FVRYKYADEAQKAVE+LDGRVVDGREI VQFAKYGPNAERI KGRI+EPV +
Sbjct: 61  FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRIIEPVPR 112


>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  213 bits (541), Expect = 4e-53
 Identities = 104/112 (92%), Positives = 107/112 (95%)
 Frame = +3

Query: 87  MSHFGRAGPPDIKDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 266
           MSHFGR+GPPDI+DTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 267 FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERISKGRILEPVEK 422
           FVRYKYADEAQKAVEKLDGR VDGREIMVQFAKYGPNAERI KGRI+E   K
Sbjct: 61  FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRIIETSSK 112


>ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
          Length = 251

 Score =  209 bits (531), Expect = 6e-52
 Identities = 98/112 (87%), Positives = 108/112 (96%)
 Frame = +3

Query: 87  MSHFGRAGPPDIKDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 266
           MSHFGR+GPPDI+DTYSLLVLNITFRTTADDL+PLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 267 FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERISKGRILEPVEK 422
           FVRYKYADEAQKA++KLDGR++DGREIMVQFAKYGPNAE+I KGR++E   K
Sbjct: 61  FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK 112


>ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
          Length = 257

 Score =  209 bits (531), Expect = 6e-52
 Identities = 98/112 (87%), Positives = 108/112 (96%)
 Frame = +3

Query: 87  MSHFGRAGPPDIKDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 266
           MSHFGR+GPPDI+DTYSLLVLNITFRTTADDL+PLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 267 FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERISKGRILEPVEK 422
           FVRYKYADEAQKA++KLDGR++DGREIMVQFAKYGPNAE+I KGR++E   K
Sbjct: 61  FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK 112


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