BLASTX nr result

ID: Panax21_contig00000031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000031
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297752.1| predicted protein [Populus trichocarpa] gi|2...   230   2e-58
gb|ABN72579.1| ubiquitin extension protein [Hevea brasiliensis]       229   3e-58
gb|AEQ75492.1| ubiquitin extension protein [Rosa multiflora]          229   5e-58
ref|XP_002266750.1| PREDICTED: ubiquitin-40S ribosomal protein S...   229   5e-58
gb|AAZ83341.1| ubiquitin extension protein [Gossypium hirsutum]       228   7e-58

>ref|XP_002297752.1| predicted protein [Populus trichocarpa]
           gi|224064701|ref|XP_002301539.1| predicted protein
           [Populus trichocarpa] gi|224114615|ref|XP_002332324.1|
           predicted protein [Populus trichocarpa]
           gi|224136388|ref|XP_002322317.1| predicted protein
           [Populus trichocarpa] gi|255548313|ref|XP_002515213.1|
           ubiquitin, putative [Ricinus communis]
           gi|1771780|emb|CAA71132.1| ubiquitin extension protein
           [Solanum tuberosum] gi|76573361|gb|ABA46785.1| ubiquitin
           extension protein-like protein [Solanum tuberosum]
           gi|118481233|gb|ABK92566.1| unknown [Populus
           trichocarpa] gi|118484030|gb|ABK93901.1| unknown
           [Populus trichocarpa] gi|118484734|gb|ABK94236.1|
           unknown [Populus trichocarpa]
           gi|118484740|gb|ABK94239.1| unknown [Populus
           trichocarpa] gi|118484834|gb|ABK94284.1| unknown
           [Populus trichocarpa] gi|196166892|gb|ACG70965.1|
           ubiquitin extensive-like protein [Ziziphus jujuba]
           gi|222832571|gb|EEE71048.1| predicted protein [Populus
           trichocarpa] gi|222843265|gb|EEE80812.1| predicted
           protein [Populus trichocarpa]
           gi|222845010|gb|EEE82557.1| predicted protein [Populus
           trichocarpa] gi|222869313|gb|EEF06444.1| predicted
           protein [Populus trichocarpa]
           gi|223545693|gb|EEF47197.1| ubiquitin, putative [Ricinus
           communis]
          Length = 156

 Score =  230 bits (586), Expect = 2e-58
 Identities = 115/136 (84%), Positives = 115/136 (84%)
 Frame = -1

Query: 688 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAXXX 509
           DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA   
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKR 80

Query: 508 XXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 329
                             KLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY
Sbjct: 81  KKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 140

Query: 328 CGKCGLTYVYQKAGGD 281
           CGKCGLTYVYQKAGGD
Sbjct: 141 CGKCGLTYVYQKAGGD 156


>gb|ABN72579.1| ubiquitin extension protein [Hevea brasiliensis]
          Length = 156

 Score =  229 bits (585), Expect = 3e-58
 Identities = 114/136 (83%), Positives = 115/136 (84%)
 Frame = -1

Query: 688 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAXXX 509
           DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA   
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKR 80

Query: 508 XXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 329
                             KLA+LQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY
Sbjct: 81  KKKTYTKPKKIKHKKKKVKLAILQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 140

Query: 328 CGKCGLTYVYQKAGGD 281
           CGKCGLTYVYQKAGGD
Sbjct: 141 CGKCGLTYVYQKAGGD 156


>gb|AEQ75492.1| ubiquitin extension protein [Rosa multiflora]
          Length = 156

 Score =  229 bits (583), Expect = 5e-58
 Identities = 114/136 (83%), Positives = 115/136 (84%)
 Frame = -1

Query: 688 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAXXX 509
           DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA   
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKR 80

Query: 508 XXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 329
                             KLAVLQFYKVDDSGKVQ+LRKECPNAECGAGTFMANHFDRHY
Sbjct: 81  KKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQKLRKECPNAECGAGTFMANHFDRHY 140

Query: 328 CGKCGLTYVYQKAGGD 281
           CGKCGLTYVYQKAGGD
Sbjct: 141 CGKCGLTYVYQKAGGD 156


>ref|XP_002266750.1| PREDICTED: ubiquitin-40S ribosomal protein S27a isoform 1 [Vitis
           vinifera] gi|359491770|ref|XP_003634320.1| PREDICTED:
           ubiquitin-40S ribosomal protein S27a isoform 2 [Vitis
           vinifera] gi|147836392|emb|CAN75420.1| hypothetical
           protein VITISV_037877 [Vitis vinifera]
          Length = 156

 Score =  229 bits (583), Expect = 5e-58
 Identities = 114/136 (83%), Positives = 115/136 (84%)
 Frame = -1

Query: 688 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAXXX 509
           DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA   
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKR 80

Query: 508 XXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 329
                             KLAVLQFYKVDDSGKVQRLRKECPN+ECGAGTFMANHFDRHY
Sbjct: 81  KKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNSECGAGTFMANHFDRHY 140

Query: 328 CGKCGLTYVYQKAGGD 281
           CGKCGLTYVYQKAGGD
Sbjct: 141 CGKCGLTYVYQKAGGD 156


>gb|AAZ83341.1| ubiquitin extension protein [Gossypium hirsutum]
          Length = 156

 Score =  228 bits (582), Expect = 7e-58
 Identities = 114/136 (83%), Positives = 115/136 (84%)
 Frame = -1

Query: 688 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAXXX 509
           DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA   
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKR 80

Query: 508 XXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHY 329
                             KLAVLQFYKVD+SGKVQRLRKECPNAECGAGTFMANHFDRHY
Sbjct: 81  KKKTYTKPKKIKHKKKKVKLAVLQFYKVDESGKVQRLRKECPNAECGAGTFMANHFDRHY 140

Query: 328 CGKCGLTYVYQKAGGD 281
           CGKCGLTYVYQKAGGD
Sbjct: 141 CGKCGLTYVYQKAGGD 156


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