BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000029
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like...   150   1e-64
gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa ...   125   2e-64
ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...   154   5e-64
emb|CBI17545.3| unnamed protein product [Vitis vinifera]              148   5e-64
ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like...   149   1e-63

>ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
           gi|449498825|ref|XP_004160645.1| PREDICTED: splicing
           factor 3B subunit 4-like [Cucumis sativus]
          Length = 379

 Score =  150 bits (380), Expect(2) = 1e-64
 Identities = 82/116 (70%), Positives = 87/116 (75%), Gaps = 8/116 (6%)
 Frame = -3

Query: 745 FFGNLDHPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSC--------CFEASDAAIEA 590
           F GNLD PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNS          FEASDAAIEA
Sbjct: 115 FIGNLD-PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173

Query: 589 MNGQYLCNRQIAVSYAYKKDTKGESHGTPAESFGCQ*SGYPEKQTTHSVYNWNPFT 422
           MNGQYLCNRQI VSYAYKKDTKGE HGTPAE      +  P+K   H+++   P T
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLA--ASNPQKSRPHTLFASGPPT 227



 Score =  122 bits (307), Expect(2) = 1e-64
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = -2

Query: 932 VNVYVSKDRVTNLHQGYGFVEFRSEEDADYVIKILNMIILYGKPIRVNKASQDKKSLDVG 753
           VNVYV KDRVTNLHQGYGF+EFRSEEDADY IK+LNMI LYGKPIRVNKASQDKKSLDVG
Sbjct: 52  VNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG 111

Query: 752 ANLF 741
           ANLF
Sbjct: 112 ANLF 115



 Score =  120 bits (300), Expect = 6e-25
 Identities = 80/176 (45%), Positives = 93/176 (52%), Gaps = 8/176 (4%)
 Frame = -1

Query: 537 RKTPKGKAM-VPQQKVLAASNPGTQKSRPHTLFTIGTPSLTNVPQVNGAISAPVPPRPFA 361
           +K  KG+    P ++VLAASNP  QKSRPHTLF  G P+L  V Q NGAI APVPPRPFA
Sbjct: 191 KKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFA 248

Query: 360 NGAV---PSGHMXXXXXXXXXXXXPMQMSAPPSWQGHQQQLGQTVAPPTMQSQPLQHFRX 190
           NGA+   P   +                  PP+WQG  QQ GQ + P +M   P+Q FR 
Sbjct: 249 NGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQ-MMPGSMIPPPVQQFRP 307

Query: 189 XXXXXXXXXPQMAQMVNRPPPPPAGMAA---QFWRPHPPP-QQMVGGHHSMQQMSI 34
                    PQ AQ  + P PPP GM     Q WRP PPP QQ   G   MQ  S+
Sbjct: 308 PPPNMPLPPPQ-AQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSM 362


>gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
           C-169]
          Length = 358

 Score =  125 bits (313), Expect(3) = 2e-64
 Identities = 64/91 (70%), Positives = 72/91 (79%), Gaps = 8/91 (8%)
 Frame = -3

Query: 745 FFGNLDHPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSC--------CFEASDAAIEA 590
           F GN+D PDVDEKLLYDTFSAFG+I+  PKIMRDP+TG +          FEASDAAIEA
Sbjct: 119 FIGNID-PDVDEKLLYDTFSAFGMIIQTPKIMRDPETGATKGFGFVSYDSFEASDAAIEA 177

Query: 589 MNGQYLCNRQIAVSYAYKKDTKGESHGTPAE 497
           MNGQ+LCNR I VS+AYKKDTKGE HG+ AE
Sbjct: 178 MNGQFLCNRPITVSFAYKKDTKGERHGSEAE 208



 Score =  111 bits (277), Expect(3) = 2e-64
 Identities = 53/64 (82%), Positives = 59/64 (92%)
 Frame = -2

Query: 932 VNVYVSKDRVTNLHQGYGFVEFRSEEDADYVIKILNMIILYGKPIRVNKASQDKKSLDVG 753
           VNVY+ KDRVT+ HQGYGFVEF+SE+DADY IKILNMI +YGKPIRVNKASQDKK+ DVG
Sbjct: 56  VNVYLPKDRVTSQHQGYGFVEFKSEDDADYAIKILNMIKVYGKPIRVNKASQDKKTQDVG 115

Query: 752 ANLF 741
           ANLF
Sbjct: 116 ANLF 119



 Score = 58.2 bits (139), Expect(3) = 2e-64
 Identities = 55/162 (33%), Positives = 62/162 (38%), Gaps = 15/162 (9%)
 Frame = -1

Query: 519 KAMVPQQKVLAASNPGTQKSRPHTLFTIG---------TPSLTNVPQVNGAISAPVPPRP 367
           + +  QQ+  AA+      SRPHTLF  G          PS  NVP        P PP P
Sbjct: 209 RQLATQQRTKAAA-----ASRPHTLFASGPRQRPDGGLAPSDDNVPG-----PPPPPPAP 258

Query: 366 FANGAVPSGHMXXXXXXXXXXXXPMQM--SAPPSWQGHQQQLGQTVAPPTMQSQP---LQ 202
            A G +  G              PMQM  S PP W   QQQ G    PP    QP     
Sbjct: 259 GAPGMMYPG----------GPPMPMQMPGSGPPQWAPPQQQYGGPPRPPPWAGQPGGPPP 308

Query: 201 HFRXXXXXXXXXXPQMAQMVNRPPPPPA-GMAAQFWRPHPPP 79
            +           P M     RPPPPP  GM    W+PH PP
Sbjct: 309 PWGQPGPPMGMPPPPMGYAPGRPPPPPGYGMPPPGWQPHMPP 350


>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score =  148 bits (374), Expect(2) = 5e-64
 Identities = 81/116 (69%), Positives = 85/116 (73%), Gaps = 8/116 (6%)
 Frame = -3

Query: 745 FFGNLDHPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSC--------CFEASDAAIEA 590
           F GNLD PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNS          FEASDAAIEA
Sbjct: 115 FVGNLD-PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEA 173

Query: 589 MNGQYLCNRQIAVSYAYKKDTKGESHGTPAESFGCQ*SGYPEKQTTHSVYNWNPFT 422
           MNGQYLCNRQI VSYAYKKDTKGE HGTPAE      +    K   H+++   P T
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPT 229



 Score =  123 bits (308), Expect(2) = 5e-64
 Identities = 60/64 (93%), Positives = 61/64 (95%)
 Frame = -2

Query: 932 VNVYVSKDRVTNLHQGYGFVEFRSEEDADYVIKILNMIILYGKPIRVNKASQDKKSLDVG 753
           VNVYV KDRVTNLHQGYGFVEFRSEEDADY IK+LNMI LYGKPIRVNKASQDKKSLDVG
Sbjct: 52  VNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG 111

Query: 752 ANLF 741
           ANLF
Sbjct: 112 ANLF 115



 Score =  154 bits (389), Expect = 3e-35
 Identities = 84/173 (48%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
 Frame = -1

Query: 537 RKTPKGKAM-VPQQKVLAASNPGTQKSRPHTLFTIGTPSLTNVPQVNGAISAPVPPRPFA 361
           +K  KG+    P ++VLAASNP   KSRPHTLF  G P+L NVPQ NG + AP+PPRPFA
Sbjct: 191 KKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNMGAPMPPRPFA 250

Query: 360 NGAVPSGHM--XXXXXXXXXXXXPMQMSAPPSWQGHQQQLGQTVAPPTMQSQPLQHFRXX 187
           NG VP   +              PMQ++ PPSWQG  QQ GQ + PP M   PLQ FR  
Sbjct: 251 NGVVPPVPIPAMRPPPPQSGAFPPMQLAGPPSWQGQPQQPGQPMQPPMMPPPPLQQFRPP 310

Query: 186 XXXXXXXXPQMAQMVNRPPPPPA--GMAAQFWRPHPPPQQMVGGHHSMQQMSI 34
                    Q+ Q ++RPPPPPA  G     WRP PPPQQ+ G   +M QMS+
Sbjct: 311 PPSMPPPPQQVMQALSRPPPPPALMGGPPPVWRPPPPPQQLAGRPPTMLQMSM 363


>emb|CBI17545.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  148 bits (374), Expect(2) = 5e-64
 Identities = 81/116 (69%), Positives = 85/116 (73%), Gaps = 8/116 (6%)
 Frame = -3

Query: 745 FFGNLDHPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSC--------CFEASDAAIEA 590
           F GNLD PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNS          FEASDAAIEA
Sbjct: 115 FVGNLD-PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEA 173

Query: 589 MNGQYLCNRQIAVSYAYKKDTKGESHGTPAESFGCQ*SGYPEKQTTHSVYNWNPFT 422
           MNGQYLCNRQI VSYAYKKDTKGE HGTPAE      +    K   H+++   P T
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPT 229



 Score =  123 bits (308), Expect(2) = 5e-64
 Identities = 60/64 (93%), Positives = 61/64 (95%)
 Frame = -2

Query: 932 VNVYVSKDRVTNLHQGYGFVEFRSEEDADYVIKILNMIILYGKPIRVNKASQDKKSLDVG 753
           VNVYV KDRVTNLHQGYGFVEFRSEEDADY IK+LNMI LYGKPIRVNKASQDKKSLDVG
Sbjct: 52  VNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG 111

Query: 752 ANLF 741
           ANLF
Sbjct: 112 ANLF 115


>ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 365

 Score =  149 bits (377), Expect(2) = 1e-63
 Identities = 81/121 (66%), Positives = 87/121 (71%), Gaps = 8/121 (6%)
 Frame = -3

Query: 745 FFGNLDHPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSC--------CFEASDAAIEA 590
           F GNLD PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNS          FEASD+AIEA
Sbjct: 115 FIGNLD-PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEA 173

Query: 589 MNGQYLCNRQIAVSYAYKKDTKGESHGTPAESFGCQ*SGYPEKQTTHSVYNWNPFTYQCS 410
           MNGQYLCNRQI VSYAYKKDTKGE HGTPAE      +   +K   H+++   P T    
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSV 233

Query: 409 P 407
           P
Sbjct: 234 P 234



 Score =  120 bits (302), Expect(2) = 1e-63
 Identities = 59/64 (92%), Positives = 60/64 (93%)
 Frame = -2

Query: 932 VNVYVSKDRVTNLHQGYGFVEFRSEEDADYVIKILNMIILYGKPIRVNKASQDKKSLDVG 753
           VNVYV KDRVTN HQGYGFVEFRSEEDADY IK+LNMI LYGKPIRVNKASQDKKSLDVG
Sbjct: 52  VNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG 111

Query: 752 ANLF 741
           ANLF
Sbjct: 112 ANLF 115



 Score =  112 bits (279), Expect = 2e-22
 Identities = 78/164 (47%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
 Frame = -1

Query: 537 RKTPKGKAM-VPQQKVLAASNPGTQKSRPHTLFTIGTPSLTNVPQVNGAISAPVPPRPFA 361
           +K  KG+    P ++VLAASNP TQKSRPHTLF  G P+L +VPQ NG   APVPPRPFA
Sbjct: 191 KKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSVPQANGV--APVPPRPFA 248

Query: 360 NG-AVPSGHMXXXXXXXXXXXXPMQMSAPPSWQGHQQQLGQTVAPPTMQSQP-LQHFRXX 187
           NG A P+               PM +   P+W  HQQQ GQT+ PP M   P +Q FR  
Sbjct: 249 NGVAPPAIPALRPPPPQAAAFQPMPVPGQPTW--HQQQPGQTLLPPAMPPPPQVQQFRPP 306

Query: 186 XXXXXXXXPQMAQMVNRPPPPPAGMAAQ---FWRPHPPPQQMVG 64
                   P   Q   RP PPP+ MA+Q    WR  PPPQQ  G
Sbjct: 307 HPGMQQMPPP-PQAPPRPLPPPSVMASQPPPVWR-LPPPQQQGG 348