BLASTX nr result
ID: Panax21_contig00000027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000027 (1352 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit... 516 e-144 ref|XP_002516394.1| spliceosome associated protein, putative [Ri... 506 e-141 ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat... 499 e-139 ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like... 498 e-138 gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora] 492 e-136 >ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera] Length = 373 Score = 516 bits (1330), Expect = e-144 Identities = 257/292 (88%), Positives = 263/292 (90%), Gaps = 2/292 (0%) Frame = +2 Query: 50 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 229 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60 Query: 230 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 409 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120 Query: 410 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 589 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGF+SYDSFEASDAAIEAMNGQYLC Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180 Query: 590 NRQITVSYAYKKDTKGERHGTPAERVLAASNPGTQKSRPHTLFASGPPSLTNVPQANGAM 769 NRQITVSYAYKKDTKGERHGTPAERVLAASNP KSRPHTLFASGPP+L NVPQANG M Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM 240 Query: 770 GGPVPPRPFSNGAVHSGQI--XXXXXXXXXXXXXMQMSAPPSWQGHQQQPGQ 919 G P+PPRPF+NG V I MQ++ PPSWQG QQPGQ Sbjct: 241 GAPMPPRPFANGVVPPVPIPAMRPPPPQSGAFPPMQLAGPPSWQGQPQQPGQ 292 >ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis] gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis] Length = 376 Score = 506 bits (1303), Expect = e-141 Identities = 247/292 (84%), Positives = 265/292 (90%), Gaps = 2/292 (0%) Frame = +2 Query: 50 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 229 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60 Query: 230 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 409 VTNLHQGYGFVEFRSEEDADYAIK++NMIKL+GKPIRVNKASQDKKSLDVGANLF+GNLD Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLD 120 Query: 410 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 589 PDVDEKLL+DTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSF+ASDAAIEAMNGQYLC Sbjct: 121 PDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLC 180 Query: 590 NRQITVSYAYKKDTKGERHGTPAERVLAASNPGTQKSRPHTLFASGPPSLTNVPQANGAM 769 NRQITVSYAYKKDTKGERHGTPAERVLAASNP +QKSRPHTLFASGPP+L ++PQANG + Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTV 240 Query: 770 GGPVPPRPFSNGAVHSGQI--XXXXXXXXXXXXXMQMSAPPSWQGHQQQPGQ 919 G PVPPRPF+NGAV G + MQ++ P+WQG QPGQ Sbjct: 241 GAPVPPRPFANGAVPPGPVPPLRPSAPPTAAFPPMQVAGQPAWQGQPPQPGQ 292 >ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula] gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula] Length = 379 Score = 499 bits (1284), Expect = e-139 Identities = 251/295 (85%), Positives = 259/295 (87%), Gaps = 1/295 (0%) Frame = +2 Query: 50 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 229 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQ++EELLWELFVQAGPVVNVYVPKDR Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60 Query: 230 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 409 VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLD Sbjct: 61 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120 Query: 410 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 589 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD+AIEAMNGQYLC Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180 Query: 590 NRQITVSYAYKKDTKGERHGTPAERVLAASNPGTQKSRPHTLFASGPPSLTNVPQANGAM 769 NRQITVSYAYKKDTKGERHGTPAERVLAASNP QKSRPHTLFASGPPSL N PQANG + Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI 240 Query: 770 GGPVPPRPFSNG-AVHSGQIXXXXXXXXXXXXXMQMSAPPSWQGHQQQPGQHVMQ 931 PVPPRPF+NG A + MQM P HQQQ GQ +MQ Sbjct: 241 PAPVPPRPFANGVAPPPIHVIQPPPPQAPAFQPMQMPPPGQQVWHQQQQGQPMMQ 295 >ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus] gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus] Length = 379 Score = 498 bits (1283), Expect = e-138 Identities = 249/293 (84%), Positives = 259/293 (88%), Gaps = 3/293 (1%) Frame = +2 Query: 50 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 229 MTT+IAPGVGANLLGQH+ ERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR Sbjct: 1 MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60 Query: 230 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 409 VTNLHQGYGF+EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLD Sbjct: 61 VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120 Query: 410 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 589 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180 Query: 590 NRQITVSYAYKKDTKGERHGTPAERVLAASNPGTQKSRPHTLFASGPPSLTNVPQANGAM 769 NRQITVSYAYKKDTKGERHGTPAERVLAASNP QKSRPHTLFASGPP+L V Q NGA+ Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAI 238 Query: 770 GGPVPPRPFSNGAVHSGQIXXXXXXXXXXXXXMQM---SAPPSWQGHQQQPGQ 919 G PVPPRPF+NGA+ I M PP+WQG QQPGQ Sbjct: 239 GAPVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQ 291 >gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora] Length = 368 Score = 492 bits (1266), Expect = e-136 Identities = 248/292 (84%), Positives = 257/292 (88%), Gaps = 2/292 (0%) Frame = +2 Query: 50 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 229 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60 Query: 230 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 409 VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS+DVGANLF+GNLD Sbjct: 61 VTNSHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSVDVGANLFIGNLD 120 Query: 410 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 589 PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSFEASDAAIEAMNGQYLC Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180 Query: 590 NRQITVSYAYKKDTKGERHGTPAERVLAASNPGTQKSRPHTLFASGPPSLTNVPQANGAM 769 NRQITVSYAYKKDTKGERHGTPAERVLAASNP QKSRPHT+FASGPP+L NV QA+ + Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPNVQKSRPHTMFASGPPTLQNVAQASANI 240 Query: 770 GGPVPPRPFSNGAVHSGQIXXXXXXXXXXXXXMQMSAPP--SWQGHQQQPGQ 919 PVPPRPF+NG V I M PP SWQG QQ PGQ Sbjct: 241 AAPVPPRPFANGNVPPTSIPPFRPPPPQASMFPPMPLPPPQSWQG-QQPPGQ 291