BLASTX nr result
ID: Panax21_contig00000020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000020
(1737 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 545 e-152
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 522 e-145
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 520 e-145
ref|XP_002513114.1| conserved hypothetical protein [Ricinus comm... 511 e-142
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 502 e-139
>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis vinifera]
gi|296081305|emb|CBI17749.3| unnamed protein product
[Vitis vinifera]
Length = 553
Score = 545 bits (1404), Expect = e-152
Identities = 316/567 (55%), Positives = 393/567 (69%), Gaps = 25/567 (4%)
Frame = -1
Query: 1734 KMTDHKVLVFGSFIENEIKSLQSQPTVN------ELDIHFGSIDSATLRSVGIFSTKQTE 1573
KM+D K+L+FGSF E+E +SL P+ N + ++ FGS+D T R++ +
Sbjct: 3 KMSDSKLLLFGSFTEDETRSLLRLPSGNAEKPAAKKELQFGSVDFVTGRALASVGNELCR 62
Query: 1572 HEDS-KG---FHPSKLVDRDHDVK-------LASQIPATMVDKNGSIHDLRSTHC-PDGV 1429
DS KG F S L+ +D + K L+S+ T + NG +HD TH P G
Sbjct: 63 QADSSKGPIDFCSSNLLKKDDETKSVDGVNKLSSEAAGTPKE-NGGVHDF--THSSPLG- 118
Query: 1428 EELKAHNVEVSALNVPGDVCDQPFQSSSINHSTSGVTVSSNPLADELSNDSSKVLNLEDS 1249
N V+ LN D S + H ++ S+ + +E S + ++DS
Sbjct: 119 ------NGVVNELNPDRFNLDSLCLSQNKEHLNQFQSLESHVVEEECSKERDLNGTIDDS 172
Query: 1248 -----IEKNICKASTSQVASVKNILPRGLINLGNLCFLNATLQALLSCSSFVQLLQELRT 1084
++K I KA +VKN+LPRGLIN GNLCFLNATLQALLSC+ F+QLLQELR
Sbjct: 173 STFVPLKKEILKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELRI 232
Query: 1083 RNIPQIGYPTLHAFDEFFSEFGVFPDSSTKQKQTVILETGRPFRPVMFESILKKFSPDVP 904
R+IP++GYPTL AF EF SEF + D S K+K +ETGRPF P MFE +LK F+PDVP
Sbjct: 233 RDIPKVGYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDVP 292
Query: 903 YCFSDRPRQEDAQEFLSFVMHQVHDELLKLDGQTPNGFGGKNISLVSSMNDEDGDDNWET 724
S RPRQEDAQEFLSFVM Q+HDELLKL+G N GGK+ SLVSS DD WET
Sbjct: 293 NKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKS-SLVSSAE----DDEWET 347
Query: 723 VGPRNKSAITRTQSFIPSQLSMIFGGQLRSVVKARGNKASATIQPFLLLHLNISPDPVFT 544
VGP+NKSA+TRTQSF+PS+LS IFGGQLRSVVKARGNKASAT+QPFLLLHL+I P+ ++T
Sbjct: 348 VGPKNKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHLDILPEAIYT 407
Query: 543 IEQALHIFSAAETLEGYR-AASRKAEVVSARKSVKIQQLPEIMILHLLRFSYG-SQGSTK 370
IE AL +FSA ETLEGYR + + KA +V+A KSVKIQ+L EIMILHL+RF Y +QGSTK
Sbjct: 408 IEDALRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFYYDENQGSTK 467
Query: 369 LHKPVHFPLELILGRELLVSTSSEGRRFELVATITHHGSDPSKGHYTADARHFTSGKWLR 190
LHKPV FPLEL+LGRELLVS ++EGR++ELVATITHHG DPSKGHYT DARH SG WLR
Sbjct: 468 LHKPVTFPLELVLGRELLVSPTTEGRKYELVATITHHGRDPSKGHYTTDARHH-SGHWLR 526
Query: 189 YNDASVTPIPTSKVLHDQAYILFYKQL 109
++D++V + TSKVLH+ Y+LFYKQ+
Sbjct: 527 FDDSAVNVVSTSKVLHEHPYVLFYKQV 553
>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 532
Score = 522 bits (1345), Expect = e-145
Identities = 299/555 (53%), Positives = 387/555 (69%), Gaps = 19/555 (3%)
Frame = -1
Query: 1716 VLVFGSFIENEIKSLQSQPT-------VNELDIHFGSIDSATLRSVGIFSTKQTEHEDSK 1558
+ +FGSF E+E +SL S+ + V + + FGS++S T+ S + ++ ++ D+
Sbjct: 1 MFLFGSFTEDETQSLLSKQSSGKKEKPVEKNQLQFGSLNSVTVESNNLLNSSKSP--DNS 58
Query: 1557 GFHPSKLVDRDHDVKLASQIPATMVDKNGSIHDLR------STHCPDGVEELKAHNVEVS 1396
S+ + V S + + +NGSI ++ ST + VEE A++ +
Sbjct: 59 PPSDSQKCNGVKSVSDNSPEVSGTIKENGSITNISPRSITTSTISVNEVEEKNANSFTLR 118
Query: 1395 ALNVPGDVCDQPFQSSSINHSTSGVTVSSNPLADELSNDSSKVLNLEDSIEK----NICK 1228
+ P + F S++ S A+ L N K+ N +DS K K
Sbjct: 119 GEDGPSN----KFTKLSLDASE----------AESLKN-LHKIGNGDDSAPKLSDREPQK 163
Query: 1227 ASTSQ-VASVKNILPRGLINLGNLCFLNATLQALLSCSSFVQLLQELRTRNIPQIGYPTL 1051
A V VK+ILPRGLIN GNLCFLNAT+QALLSCS FV LLQ+LRTRN+P++GYPTL
Sbjct: 164 APNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTRNLPKVGYPTL 223
Query: 1050 HAFDEFFSEFGVFPDSSTKQKQTVILETGRPFRPVMFESILKKFSPDVPYCFSDRPRQED 871
AF EF ++F + + K++ T E+GRPFRPVMFE +LK F+PDVP S RPRQED
Sbjct: 224 TAFAEFIAQFDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDVPNSISGRPRQED 283
Query: 870 AQEFLSFVMHQVHDELLKLDGQTPNGFGGKNISLVSSMNDEDGDDNWETVGPRNKSAITR 691
AQEFLSFVM Q+HDELLKL+G + + G SLVSS+ DD WETVGP+NKSA+TR
Sbjct: 284 AQEFLSFVMDQMHDELLKLEGHS-SSLNGSKSSLVSSVE----DDEWETVGPKNKSAVTR 338
Query: 690 TQSFIPSQLSMIFGGQLRSVVKARGNKASATIQPFLLLHLNISPDPVFTIEQALHIFSAA 511
TQSF+PS LS IFGGQLRS+V+A+GN+ASAT+QP+LLLHL+I PD V TIE ALH+FSA
Sbjct: 339 TQSFLPSDLSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAP 398
Query: 510 ETLEGYRAA-SRKAEVVSARKSVKIQQLPEIMILHLLRFSYGSQGSTKLHKPVHFPLELI 334
ETLEGYR + + KA VV+ARKSV+I LP+IMILHL+RF YGSQGS KLHKPVHFPLEL+
Sbjct: 399 ETLEGYRTSLTAKAGVVTARKSVRIVTLPKIMILHLMRFGYGSQGSIKLHKPVHFPLELV 458
Query: 333 LGRELLVSTSSEGRRFELVATITHHGSDPSKGHYTADARHFTSGKWLRYNDASVTPIPTS 154
LGRELLVS S+EGR++ELVATITHHG++PSKGHYTADA+ + +G+WLR++D SV I T+
Sbjct: 459 LGRELLVSPSTEGRKYELVATITHHGTEPSKGHYTADAQ-YPNGRWLRFDDQSVFAIGTN 517
Query: 153 KVLHDQAYILFYKQL 109
KVLHDQAY+LFY+Q+
Sbjct: 518 KVLHDQAYVLFYRQM 532
>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 530
Score = 520 bits (1338), Expect = e-145
Identities = 298/553 (53%), Positives = 384/553 (69%), Gaps = 17/553 (3%)
Frame = -1
Query: 1716 VLVFGSFIENEIKSLQSQPT-------VNELDIHFGSIDSATLRSVGIFSTKQTEHE--- 1567
+ VFGSF E+E +SL S+ + V + + FGS++S T+ S + ++ + +
Sbjct: 1 MFVFGSFTEDETRSLLSKQSFGKKEKPVEKNQLQFGSLNSVTVESNNLLNSSKASYNAPP 60
Query: 1566 -DSKGFHPSK-LVDRDHDVKLASQIPATMVDKNGSIHDL--RSTHCPDGVEELKAHNVEV 1399
DS+ + K +D +V + V +NGSI ++ RST V E++ NV
Sbjct: 61 SDSRKCNGVKSAIDNSPEV-------SGTVKENGSITNISPRSTSTIS-VNEVEEKNVNF 112
Query: 1398 SALNVPGDVCDQPFQS-SSINHSTSGVTVSSNPLADELSNDSSKVLNLEDSIEKNICKAS 1222
L D P + ++ S N +DS+ L ++ KA
Sbjct: 113 FTLRCE----DGPLNKFTKLSLDASEAESLKNVHTTGSGDDSAPKLP-----DREPQKAP 163
Query: 1221 TSQ-VASVKNILPRGLINLGNLCFLNATLQALLSCSSFVQLLQELRTRNIPQIGYPTLHA 1045
V VK+ILPRGLIN GNLCFLNAT+QALLSCS FV LLQ+LRT N+P++GYPTL A
Sbjct: 164 NGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTCNLPKVGYPTLTA 223
Query: 1044 FDEFFSEFGVFPDSSTKQKQTVILETGRPFRPVMFESILKKFSPDVPYCFSDRPRQEDAQ 865
F EF ++F + + K++ E+GRPFRPVMFE +LK F+PDVP S RPRQEDAQ
Sbjct: 224 FAEFITQFDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDVPNSISGRPRQEDAQ 283
Query: 864 EFLSFVMHQVHDELLKLDGQTPNGFGGKNISLVSSMNDEDGDDNWETVGPRNKSAITRTQ 685
EFLSFVM Q+HDELLKL+GQ+ + G SLVSS+ DD WETVGP+NKSA+TRTQ
Sbjct: 284 EFLSFVMDQMHDELLKLEGQS-SSLNGSKSSLVSSVE----DDEWETVGPKNKSAVTRTQ 338
Query: 684 SFIPSQLSMIFGGQLRSVVKARGNKASATIQPFLLLHLNISPDPVFTIEQALHIFSAAET 505
SF+PS+LS IFGGQLRS+V+A+GN+ASAT+QP+LLLHL+I PD V TIE ALH+FSA ET
Sbjct: 339 SFLPSELSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPET 398
Query: 504 LEGYRAA-SRKAEVVSARKSVKIQQLPEIMILHLLRFSYGSQGSTKLHKPVHFPLELILG 328
LEGYR + + KA VV+ARKSV+I LP+IMILHL+RF YGSQGSTKLHKPVHFPLEL+LG
Sbjct: 399 LEGYRTSLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKPVHFPLELVLG 458
Query: 327 RELLVSTSSEGRRFELVATITHHGSDPSKGHYTADARHFTSGKWLRYNDASVTPIPTSKV 148
R+LLVS S+EGR++ELVATITHHG +PSKGHYTADA+ + +G+WLR++D SV I T+KV
Sbjct: 459 RDLLVSPSTEGRKYELVATITHHGMEPSKGHYTADAQ-YPNGRWLRFDDQSVFAIGTNKV 517
Query: 147 LHDQAYILFYKQL 109
LHDQAY+LFY+Q+
Sbjct: 518 LHDQAYVLFYRQI 530
>ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
gi|223548125|gb|EEF49617.1| conserved hypothetical
protein [Ricinus communis]
Length = 605
Score = 511 bits (1317), Expect = e-142
Identities = 303/555 (54%), Positives = 380/555 (68%), Gaps = 19/555 (3%)
Frame = -1
Query: 1716 VLVFGSFIENEIKSLQSQPT-------VNELDIHFGSIDSATLRSVGIFSTKQTEHEDSK 1558
VLVFGSF E+E KS Q+ + V + ++ FGS++ AT + G FS++ + S
Sbjct: 89 VLVFGSFTEDETKSWQANKSSENDKKPVQKKELQFGSLNFATGITFGDFSSESSRQPGST 148
Query: 1557 G----FHPSKLVDRDHDVKLASQIPATMVD---KNGSIHDL-RSTHCPDGVEELKAHNVE 1402
F + ++ DVK+A +++ +NGSI D+ S +GV+ LK +++
Sbjct: 149 NGKVSFQSTNPHKKEKDVKIAINPEPSVLGSPKQNGSIADITHSVTLANGVKGLKTESLD 208
Query: 1401 VSALNVPGDVCDQPF---QSSSINHSTSGVTVSSNPLADELSNDSSKVLNLEDSIEKNIC 1231
+++L++ + D P QSS+ + SG + D ++N+S + E N
Sbjct: 209 LASLHLSQNE-DSPINLSQSSNFHVLDSGAVKGGD--LDGINNNSLVYVENE-----NTR 260
Query: 1230 KASTSQVASVKNILPRGLINLGNLCFLNATLQALLSCSSFVQLLQELRTRNIPQIGYPTL 1051
K VA+ ALLSCS FVQLLQ LRTRNIP++G+PTL
Sbjct: 261 KPCDEPVAA-----------------------ALLSCSPFVQLLQNLRTRNIPKVGFPTL 297
Query: 1050 HAFDEFFSEFGVFPDSSTKQKQTVILETGRPFRPVMFESILKKFSPDVPYCFSDRPRQED 871
AF +F SEF + P SS+ +K T I+ETGRPF P MFE +LKKF+PDVP C S RPRQED
Sbjct: 298 TAFAQFVSEFDM-PSSSSLKKDTAIVETGRPFSPAMFEGVLKKFTPDVPNCISGRPRQED 356
Query: 870 AQEFLSFVMHQVHDELLKLDGQTPNGFGGKNISLVSSMNDEDGDDNWETVGPRNKSAITR 691
AQEFLSF+M Q+HDELLKL+GQ G K+ SLVSS D D WETVGP+NKSA+TR
Sbjct: 357 AQEFLSFIMDQMHDELLKLEGQFACTNGAKS-SLVSSTED----DEWETVGPKNKSAVTR 411
Query: 690 TQSFIPSQLSMIFGGQLRSVVKARGNKASATIQPFLLLHLNISPDPVFTIEQALHIFSAA 511
TQSFIPS+LS IFGGQLRSVVKA GNKASAT+QPFLLLHL+I P+ V TIE ALH+FSA
Sbjct: 412 TQSFIPSELSDIFGGQLRSVVKATGNKASATVQPFLLLHLDIYPEAVRTIEDALHLFSAL 471
Query: 510 ETLEGYRA-ASRKAEVVSARKSVKIQQLPEIMILHLLRFSYGSQGSTKLHKPVHFPLELI 334
E LEGYRA + KA +V+ARKSVKIQ L +IMILHL+RFSYGSQGSTKLHKPVHFPLEL+
Sbjct: 472 ENLEGYRAPVTGKAGIVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVHFPLELV 531
Query: 333 LGRELLVSTSSEGRRFELVATITHHGSDPSKGHYTADARHFTSGKWLRYNDASVTPIPTS 154
LGRELLVS S+E R++ELVATITHHG +PSKGHYTADAR +G WL ++DASVT I TS
Sbjct: 532 LGRELLVSPSTESRKYELVATITHHGREPSKGHYTADAR-CPNGHWLHFDDASVTAIGTS 590
Query: 153 KVLHDQAYILFYKQL 109
KVLHDQAY+LFY+Q+
Sbjct: 591 KVLHDQAYVLFYRQV 605
>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 532
Score = 502 bits (1292), Expect = e-139
Identities = 288/550 (52%), Positives = 378/550 (68%), Gaps = 9/550 (1%)
Frame = -1
Query: 1731 MTDHKVLVFGSFIENEIKSLQ-------SQPTVNELDIHFGSIDSATLRSVGIFSTKQTE 1573
M++ KVL+FGSF E+E +SL+ ++ V + + FGS++S T+ S + ++ +
Sbjct: 1 MSNPKVLLFGSFTEDETRSLRVKKSSAKNEKPVEKNQLQFGSLNSVTVESSNLPNSPKAT 60
Query: 1572 HEDSKGFHPSKLVDRDHDVKL-ASQIPATMVDKNGSIHDLRSTHCPDGVEELKAHNVEVS 1396
+ S H S+ + V++ Q+ T+ + G + E+K H V
Sbjct: 61 N--SAPLHDSQKFKGVNGVRVNLPQVTETIKENGGITNFSIGPSSITSANEVKEHIVCSV 118
Query: 1395 ALNVPGDVCDQPFQSSSINHSTSGVTVSSNPLADELSNDSSKVLNLEDSIEKNICKASTS 1216
V +Q ++++ S N L + DSS L E+N+ KA
Sbjct: 119 TPIVENGTANQ---FTNLSLDASEAESLKNVLKNGSGGDSSSKL-----FEQNLKKAPNG 170
Query: 1215 Q-VASVKNILPRGLINLGNLCFLNATLQALLSCSSFVQLLQELRTRNIPQIGYPTLHAFD 1039
V VK++ PRGLIN GNLCFL+AT+QALL+CS FVQLLQELRTR IP++GYPTL AF
Sbjct: 171 HAVMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTIPKVGYPTLKAFA 230
Query: 1038 EFFSEFGVFPDSSTKQKQTVILETGRPFRPVMFESILKKFSPDVPYCFSDRPRQEDAQEF 859
EF ++F + + K+K T E GR F PVMFE +LK F+PDVP S RPRQEDAQEF
Sbjct: 231 EFVTQFDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSISGRPRQEDAQEF 290
Query: 858 LSFVMHQVHDELLKLDGQTPNGFGGKNISLVSSMNDEDGDDNWETVGPRNKSAITRTQSF 679
LSFVM Q+HDELLKL+GQ+ + G K+ LVSS+ DD WETVGP+NKSA+TRTQSF
Sbjct: 291 LSFVMDQMHDELLKLEGQSSSLNGSKSF-LVSSVE----DDEWETVGPKNKSAVTRTQSF 345
Query: 678 IPSQLSMIFGGQLRSVVKARGNKASATIQPFLLLHLNISPDPVFTIEQALHIFSAAETLE 499
IPS+L+ IFGGQL+S+V +GN+ SAT QP+ L+HL+I PD V TIE ALH+FSA ETLE
Sbjct: 346 IPSELNGIFGGQLQSLVITKGNR-SATNQPYRLIHLDIHPDAVHTIEDALHLFSAPETLE 404
Query: 498 GYRAASRKAEVVSARKSVKIQQLPEIMILHLLRFSYGSQGSTKLHKPVHFPLELILGREL 319
GYR AS + +A+KS+KI+ LP++MILHL+RF YGSQGSTKL KPVHFPLEL+LGR+L
Sbjct: 405 GYR-ASVSGKAGTAKKSIKIKTLPKVMILHLMRFGYGSQGSTKLLKPVHFPLELVLGRDL 463
Query: 318 LVSTSSEGRRFELVATITHHGSDPSKGHYTADARHFTSGKWLRYNDASVTPIPTSKVLHD 139
LVS S+EGR++ELVATITHHG +PSKGHYTADA+ + +G+WLR++DASV I T+KVLHD
Sbjct: 464 LVSPSTEGRKYELVATITHHGREPSKGHYTADAQ-YPNGRWLRFDDASVFAIATNKVLHD 522
Query: 138 QAYILFYKQL 109
QAY+LFYKQ+
Sbjct: 523 QAYVLFYKQI 532