BLASTX nr result
ID: Panax21_contig00000016
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000016 (751 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 225 7e-57 ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804... 224 1e-56 ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790... 224 2e-56 ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260... 222 7e-56 emb|CBI37628.3| unnamed protein product [Vitis vinifera] 222 7e-56 >ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c-like [Cucumis sativus] gi|449528150|ref|XP_004171069.1| PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c-like [Cucumis sativus] Length = 345 Score = 225 bits (574), Expect = 7e-57 Identities = 118/216 (54%), Positives = 151/216 (69%), Gaps = 11/216 (5%) Frame = +1 Query: 136 KMDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYA-------CRS 294 ++DLD+FR +L + +DVWTFID A+ VAS D+G++LK+RRD IV+RLYA CR+ Sbjct: 3 RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62 Query: 295 CD----EVNRQQNLPAIRGDNEAKVKHSPYTPQSVHRXXXXXXXXXXXXXXPFGGLFDDE 462 CD R +G E K + SP TPQ V P+ GLFDDE Sbjct: 63 CDTDRNHDGRSNGCEIKQGSGEVK-EASPSTPQFV------VVEGDDDGADPYAGLFDDE 115 Query: 463 ETRILTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHPSNDVRR 642 + ++L IKEQ+E P+Q ++ LVELLQ L+DMDITF+ LKETDIGRHVNRLRKHPSNDVRR Sbjct: 116 QKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRR 175 Query: 643 LVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGESP 750 LVK LVRKWK++VDEWV+LN P ++T++ADG+SP Sbjct: 176 LVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSP 211 >ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max] Length = 361 Score = 224 bits (572), Expect = 1e-56 Identities = 123/225 (54%), Positives = 152/225 (67%), Gaps = 21/225 (9%) Frame = +1 Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYA-------CRSC 297 MDLD+FR +L + +DVW FIDAAIAVAS+D ELK RRD IV+RLYA CR C Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60 Query: 298 DEVNRQQNLPAIRGDNEAKVKHSPY--------------TPQSVHRXXXXXXXXXXXXXX 435 D+ N I+ + + P+ TPQS+ Sbjct: 61 DDGGNDLNGHQIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEEDLD----- 115 Query: 436 PFGGLFDDEETRILTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLR 615 P+GGLFDDE+ +IL IKEQ+E+P+QS++ LVELLQ L+DMDITF+ LKETDIGRHVNRLR Sbjct: 116 PYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLR 175 Query: 616 KHPSNDVRRLVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGESP 750 KHPSNDVRRLVK LVRKWK++VDEWVKLN P+ S+T++ADG+SP Sbjct: 176 KHPSNDVRRLVKLLVRKWKEIVDEWVKLN-PQGRSNTLMADGDSP 219 >ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max] Length = 356 Score = 224 bits (570), Expect = 2e-56 Identities = 124/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%) Frame = +1 Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYA-------CRSC 297 MDLD+FR +L + +DVW FIDAAIAVASSD +LK RRD IV+RLYA CR+C Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60 Query: 298 DEVNRQQNLPAI-----------RGDNEAKVKHSPYTPQSVHRXXXXXXXXXXXXXXPFG 444 DE + N I R + + SP TPQS+ P+G Sbjct: 61 DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLD---PYG 117 Query: 445 GLFDDEETRILTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHP 624 GL DDE+ +IL IKEQ+E+P+QS++ LVELLQ L+DMDITF+GLKETDIGRHVNRLRKHP Sbjct: 118 GLLDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHP 177 Query: 625 SNDVRRLVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGES 747 SND+RRLVK LVRKWK++VDEWVKLN P S+T++ADG+S Sbjct: 178 SNDLRRLVKLLVRKWKEIVDEWVKLN-PRGGSNTLMADGDS 217 >ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis vinifera] Length = 305 Score = 222 bits (565), Expect = 7e-56 Identities = 121/213 (56%), Positives = 147/213 (69%), Gaps = 9/213 (4%) Frame = +1 Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYACRSCDEVN-RQ 315 MD DEFR++L NS +DVW FI+ AI+VA SD+G EL+ RRD IV+R+Y C N R Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSSRCGSCNLRY 60 Query: 316 QNLPAIRGDNEAKVKH-------SPYTPQSVHRXXXXXXXXXXXXXXPFGGLFDDEETRI 474 Q+ +G +E K SP TPQS++R +GGL D+EE RI Sbjct: 61 QHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR---------YGGLLDEEEARI 111 Query: 475 LTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHPSNDVRRLVKQ 654 L IKE +E P+Q D+ +V+LLQ L+DMDITFK LKETDIGRHVNRLRKHPSNDVRRLVK Sbjct: 112 LDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKH 171 Query: 655 LVRKWKDLVDEWVKLNPP-EIPSSTIIADGESP 750 LVRKWKDLVDEWVK NP E SS ++A+G+SP Sbjct: 172 LVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSP 204 >emb|CBI37628.3| unnamed protein product [Vitis vinifera] Length = 332 Score = 222 bits (565), Expect = 7e-56 Identities = 121/213 (56%), Positives = 147/213 (69%), Gaps = 9/213 (4%) Frame = +1 Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYACRSCDEVN-RQ 315 MD DEFR++L NS +DVW FI+ AI+VA SD+G EL+ RRD IV+R+Y C N R Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSSRCGSCNLRY 60 Query: 316 QNLPAIRGDNEAKVKH-------SPYTPQSVHRXXXXXXXXXXXXXXPFGGLFDDEETRI 474 Q+ +G +E K SP TPQS++R +GGL D+EE RI Sbjct: 61 QHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR---------YGGLLDEEEARI 111 Query: 475 LTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHPSNDVRRLVKQ 654 L IKE +E P+Q D+ +V+LLQ L+DMDITFK LKETDIGRHVNRLRKHPSNDVRRLVK Sbjct: 112 LDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKH 171 Query: 655 LVRKWKDLVDEWVKLNPP-EIPSSTIIADGESP 750 LVRKWKDLVDEWVK NP E SS ++A+G+SP Sbjct: 172 LVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSP 204