BLASTX nr result

ID: Panax21_contig00000016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000016
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   225   7e-57
ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804...   224   1e-56
ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790...   224   2e-56
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...   222   7e-56
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              222   7e-56

>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score =  225 bits (574), Expect = 7e-57
 Identities = 118/216 (54%), Positives = 151/216 (69%), Gaps = 11/216 (5%)
 Frame = +1

Query: 136 KMDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYA-------CRS 294
           ++DLD+FR +L  + +DVWTFID A+ VAS D+G++LK+RRD IV+RLYA       CR+
Sbjct: 3   RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62

Query: 295 CD----EVNRQQNLPAIRGDNEAKVKHSPYTPQSVHRXXXXXXXXXXXXXXPFGGLFDDE 462
           CD       R       +G  E K + SP TPQ V                P+ GLFDDE
Sbjct: 63  CDTDRNHDGRSNGCEIKQGSGEVK-EASPSTPQFV------VVEGDDDGADPYAGLFDDE 115

Query: 463 ETRILTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHPSNDVRR 642
           + ++L IKEQ+E P+Q ++ LVELLQ L+DMDITF+ LKETDIGRHVNRLRKHPSNDVRR
Sbjct: 116 QKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRR 175

Query: 643 LVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGESP 750
           LVK LVRKWK++VDEWV+LN P   ++T++ADG+SP
Sbjct: 176 LVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSP 211


>ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max]
          Length = 361

 Score =  224 bits (572), Expect = 1e-56
 Identities = 123/225 (54%), Positives = 152/225 (67%), Gaps = 21/225 (9%)
 Frame = +1

Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYA-------CRSC 297
           MDLD+FR +L  + +DVW FIDAAIAVAS+D   ELK RRD IV+RLYA       CR C
Sbjct: 1   MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60

Query: 298 DEVNRQQNLPAIRGDNEAKVKHSPY--------------TPQSVHRXXXXXXXXXXXXXX 435
           D+     N   I+  +    +  P+              TPQS+                
Sbjct: 61  DDGGNDLNGHQIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEEDLD----- 115

Query: 436 PFGGLFDDEETRILTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLR 615
           P+GGLFDDE+ +IL IKEQ+E+P+QS++ LVELLQ L+DMDITF+ LKETDIGRHVNRLR
Sbjct: 116 PYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLR 175

Query: 616 KHPSNDVRRLVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGESP 750
           KHPSNDVRRLVK LVRKWK++VDEWVKLN P+  S+T++ADG+SP
Sbjct: 176 KHPSNDVRRLVKLLVRKWKEIVDEWVKLN-PQGRSNTLMADGDSP 219


>ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max]
          Length = 356

 Score =  224 bits (570), Expect = 2e-56
 Identities = 124/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
 Frame = +1

Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYA-------CRSC 297
           MDLD+FR +L  + +DVW FIDAAIAVASSD   +LK RRD IV+RLYA       CR+C
Sbjct: 1   MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60

Query: 298 DEVNRQQNLPAI-----------RGDNEAKVKHSPYTPQSVHRXXXXXXXXXXXXXXPFG 444
           DE   + N   I           R  + +    SP TPQS+                P+G
Sbjct: 61  DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLD---PYG 117

Query: 445 GLFDDEETRILTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHP 624
           GL DDE+ +IL IKEQ+E+P+QS++ LVELLQ L+DMDITF+GLKETDIGRHVNRLRKHP
Sbjct: 118 GLLDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHP 177

Query: 625 SNDVRRLVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGES 747
           SND+RRLVK LVRKWK++VDEWVKLN P   S+T++ADG+S
Sbjct: 178 SNDLRRLVKLLVRKWKEIVDEWVKLN-PRGGSNTLMADGDS 217


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score =  222 bits (565), Expect = 7e-56
 Identities = 121/213 (56%), Positives = 147/213 (69%), Gaps = 9/213 (4%)
 Frame = +1

Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYACRSCDEVN-RQ 315
           MD DEFR++L NS +DVW FI+ AI+VA SD+G EL+ RRD IV+R+Y    C   N R 
Sbjct: 1   MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSSRCGSCNLRY 60

Query: 316 QNLPAIRGDNEAKVKH-------SPYTPQSVHRXXXXXXXXXXXXXXPFGGLFDDEETRI 474
           Q+    +G +E K          SP TPQS++R               +GGL D+EE RI
Sbjct: 61  QHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR---------YGGLLDEEEARI 111

Query: 475 LTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHPSNDVRRLVKQ 654
           L IKE +E P+Q D+ +V+LLQ L+DMDITFK LKETDIGRHVNRLRKHPSNDVRRLVK 
Sbjct: 112 LDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKH 171

Query: 655 LVRKWKDLVDEWVKLNPP-EIPSSTIIADGESP 750
           LVRKWKDLVDEWVK NP  E  SS ++A+G+SP
Sbjct: 172 LVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSP 204


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  222 bits (565), Expect = 7e-56
 Identities = 121/213 (56%), Positives = 147/213 (69%), Gaps = 9/213 (4%)
 Frame = +1

Query: 139 MDLDEFRVMLSNSTLDVWTFIDAAIAVASSDHGHELKDRRDAIVQRLYACRSCDEVN-RQ 315
           MD DEFR++L NS +DVW FI+ AI+VA SD+G EL+ RRD IV+R+Y    C   N R 
Sbjct: 1   MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSSRCGSCNLRY 60

Query: 316 QNLPAIRGDNEAKVKH-------SPYTPQSVHRXXXXXXXXXXXXXXPFGGLFDDEETRI 474
           Q+    +G +E K          SP TPQS++R               +GGL D+EE RI
Sbjct: 61  QHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR---------YGGLLDEEEARI 111

Query: 475 LTIKEQIEDPEQSDEYLVELLQGLSDMDITFKGLKETDIGRHVNRLRKHPSNDVRRLVKQ 654
           L IKE +E P+Q D+ +V+LLQ L+DMDITFK LKETDIGRHVNRLRKHPSNDVRRLVK 
Sbjct: 112 LDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKH 171

Query: 655 LVRKWKDLVDEWVKLNPP-EIPSSTIIADGESP 750
           LVRKWKDLVDEWVK NP  E  SS ++A+G+SP
Sbjct: 172 LVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSP 204


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