BLASTX nr result

ID: Panax21_contig00000012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000012
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   813   0.0  
ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|2...   809   0.0  
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   801   0.0  
ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   792   0.0  
ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ...   790   0.0  

>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
            vinifera]
          Length = 595

 Score =  813 bits (2100), Expect = 0.0
 Identities = 406/482 (84%), Positives = 445/482 (92%)
 Frame = +1

Query: 103  ESSNPNGALTNTRFSDLKPPLSEPVLEALTQAGFQFCTPVQANTIPLLCSYKDVAVDAAT 282
            +SS+PN ALT TRFS+L PPLSEPVLEALTQ+GF FCTPVQA TIPLLCS+KDVAVDAAT
Sbjct: 7    DSSDPNRALTTTRFSELNPPLSEPVLEALTQSGFHFCTPVQAATIPLLCSFKDVAVDAAT 66

Query: 283  GSGKTLAFLVPLVEILRRSSTPPKPHQVMGMVISPTRELSSQIFHVAQPFISTLSNVKPI 462
            GSGKTLAF+VPLVEILRR+S+ PKPHQV+G+++SPTRELSSQI++VAQPFISTL NVK +
Sbjct: 67   GSGKTLAFVVPLVEILRRASSAPKPHQVLGVILSPTRELSSQIYNVAQPFISTLPNVKSV 126

Query: 463  LLVGGVEVKSDMRKIEEEGANLLIGTPGRLYDIMDRMGILDFRNLEILILDEADRLLDMG 642
            LLVGGVEVKSD++KIEEEGANLLIGTPGRLYDIM+RM +LDFRNLEILILDEADRLLDMG
Sbjct: 127  LLVGGVEVKSDLKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILILDEADRLLDMG 186

Query: 643  FQKQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKSIDGIXXXXX 822
            FQKQITSII+RLPKLRRTGLFSATQTEAVEEL+KAGLRNPVRVEVRAE KS++       
Sbjct: 187  FQKQITSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQ 246

Query: 823  XXXXXXXXGLHLEYLECEADKKPSQLLDLLVKNKSKKIIIYYMTCASVDYWGVVLPHLAA 1002
                    GL++EYLECEADKKPSQL+DLL+KNKSKKIIIY+MTCA VDYWGV+LP L+ 
Sbjct: 247  LASSKTPSGLNIEYLECEADKKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVILPRLSV 306

Query: 1003 LKNFSIISLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDP 1182
            LK FS+I LHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDP
Sbjct: 307  LKGFSLIPLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDP 366

Query: 1183 NVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLEERKSFDEASDVVPEIRSA 1362
            NVFIHRVGRTAR+GRQGSA+VFLLPKEEAYVEFLRIRRVPL+      +ASDVVP+IRSA
Sbjct: 367  NVFIHRVGRTARMGRQGSAVVFLLPKEEAYVEFLRIRRVPLQGMTCSSDASDVVPQIRSA 426

Query: 1363 AKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPSMPEVKHHS 1542
            AKKDRDVMEKGLRAFVS++RAYKEHHCSYIFRWKELEIGKL MG+GLLQLPSMPEVKHHS
Sbjct: 427  AKKDRDVMEKGLRAFVSFVRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMPEVKHHS 486

Query: 1543 LS 1548
            LS
Sbjct: 487  LS 488


>ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|222852002|gb|EEE89549.1|
            predicted protein [Populus trichocarpa]
          Length = 592

 Score =  809 bits (2090), Expect = 0.0
 Identities = 408/482 (84%), Positives = 443/482 (91%)
 Frame = +1

Query: 103  ESSNPNGALTNTRFSDLKPPLSEPVLEALTQAGFQFCTPVQANTIPLLCSYKDVAVDAAT 282
            ES NPN ALTNTRFSDLKP +SEPVLEALT +GF +CTPVQA TIPLLCSYKDVAVDAAT
Sbjct: 5    ESPNPNRALTNTRFSDLKPSISEPVLEALTNSGFDYCTPVQAATIPLLCSYKDVAVDAAT 64

Query: 283  GSGKTLAFLVPLVEILRRSSTPPKPHQVMGMVISPTRELSSQIFHVAQPFISTLSNVKPI 462
            GSGKTLAF+VPLVEILRRSS+P KPHQVMG++ISPTRELSSQI++VAQPFI+TLSN K +
Sbjct: 65   GSGKTLAFVVPLVEILRRSSSP-KPHQVMGIIISPTRELSSQIYNVAQPFIATLSNFKSM 123

Query: 463  LLVGGVEVKSDMRKIEEEGANLLIGTPGRLYDIMDRMGILDFRNLEILILDEADRLLDMG 642
            LLVGG++VK+D++ IEEEGANLLIGTPGRL+DIMDR+ +LDFRNLE+LILDEADRLLDMG
Sbjct: 124  LLVGGMDVKADVKMIEEEGANLLIGTPGRLFDIMDRVDVLDFRNLEVLILDEADRLLDMG 183

Query: 643  FQKQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKSIDGIXXXXX 822
            FQKQ+ SIISRLPKLRRTGLFSATQTEAVEEL+KAGLRNPV+VEVRAETKS++       
Sbjct: 184  FQKQLNSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVKVEVRAETKSLNNSVSGQQ 243

Query: 823  XXXXXXXXGLHLEYLECEADKKPSQLLDLLVKNKSKKIIIYYMTCASVDYWGVVLPHLAA 1002
                    GL LEYLECEADKKPSQL+DLLVKNKSKKIIIY+MTCA VDYWGVVLP L  
Sbjct: 244  LAPSKTPSGLLLEYLECEADKKPSQLVDLLVKNKSKKIIIYFMTCACVDYWGVVLPRLTV 303

Query: 1003 LKNFSIISLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDP 1182
            L  FS+ISLHGKMKQTAREKAL SFTSL+SGILLCTDVAARGLDIPGVDCIVQYDPPQDP
Sbjct: 304  LNGFSLISLHGKMKQTAREKALTSFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDP 363

Query: 1183 NVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLEERKSFDEASDVVPEIRSA 1362
            NVF+HRVGRTARLGRQGS+IVFLLPKEEAYVEFLRIRRVPL ERK  D+A DVVP+IRSA
Sbjct: 364  NVFVHRVGRTARLGRQGSSIVFLLPKEEAYVEFLRIRRVPLLERKCADDAPDVVPQIRSA 423

Query: 1363 AKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPSMPEVKHHS 1542
            AKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELE+GKLGMG+GLLQLPSMPEVKHHS
Sbjct: 424  AKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVKHHS 483

Query: 1543 LS 1548
            LS
Sbjct: 484  LS 485


>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine max]
          Length = 589

 Score =  801 bits (2068), Expect = 0.0
 Identities = 400/483 (82%), Positives = 442/483 (91%)
 Frame = +1

Query: 100  MESSNPNGALTNTRFSDLKPPLSEPVLEALTQAGFQFCTPVQANTIPLLCSYKDVAVDAA 279
            M+S  PN ALT+TRFSDL PPLSEPVL+AL+ +GF+FCTPVQA TIPLLCS+KDVAVDAA
Sbjct: 1    MDSEFPNKALTSTRFSDLNPPLSEPVLQALSHSGFEFCTPVQAATIPLLCSFKDVAVDAA 60

Query: 280  TGSGKTLAFLVPLVEILRRSSTPPKPHQVMGMVISPTRELSSQIFHVAQPFISTLSNVKP 459
            TGSGKTLAF+VPLVEILRRSS+ PKPHQV+G++ISPTRELS+QI+HVAQPFISTL+NVK 
Sbjct: 61   TGSGKTLAFVVPLVEILRRSSSHPKPHQVLGIIISPTRELSTQIYHVAQPFISTLANVKS 120

Query: 460  ILLVGGVEVKSDMRKIEEEGANLLIGTPGRLYDIMDRMGILDFRNLEILILDEADRLLDM 639
            +LLVGG EVK+D++KIEEEGAN+LIGTPGRLYDIM+RM +LD +NLEILILDEADRLLDM
Sbjct: 121  MLLVGGAEVKADLKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDM 180

Query: 640  GFQKQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKSIDGIXXXX 819
            GFQKQITSII+ LPKLRRTGLFSATQTEA+EELAKAGLRNPVRVEVRAETKS +G     
Sbjct: 181  GFQKQITSIITLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSK 240

Query: 820  XXXXXXXXXGLHLEYLECEADKKPSQLLDLLVKNKSKKIIIYYMTCASVDYWGVVLPHLA 999
                     GLH+EYLECEADKKPSQL+ +L+KN SKKIIIY+MTCA VDYWG VLP L+
Sbjct: 241  QPESSKTPSGLHIEYLECEADKKPSQLVHILIKNLSKKIIIYFMTCACVDYWGAVLPCLS 300

Query: 1000 ALKNFSIISLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQD 1179
             LK FS+I LHGKMKQ+AREKALASFTSLS+GILLCTDVAARGLDIPGVDCIVQYDPPQD
Sbjct: 301  VLKGFSLIPLHGKMKQSAREKALASFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD 360

Query: 1180 PNVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLEERKSFDEASDVVPEIRS 1359
            PNVFIHRVGRTARLG+QG A+VFLLPKEE+YVEFLRIRRVPL+ER   DEASDVVP+IRS
Sbjct: 361  PNVFIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICADEASDVVPQIRS 420

Query: 1360 AAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPSMPEVKHH 1539
            AAKKDRDVMEKG++AFVSYIRAYKEHHCSYIFRWKELEIGKL  GFGLLQLPSMPEVKHH
Sbjct: 421  AAKKDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHH 480

Query: 1540 SLS 1548
            SLS
Sbjct: 481  SLS 483


>ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 1
            [Glycine max]
          Length = 589

 Score =  792 bits (2046), Expect = 0.0
 Identities = 395/483 (81%), Positives = 438/483 (90%)
 Frame = +1

Query: 100  MESSNPNGALTNTRFSDLKPPLSEPVLEALTQAGFQFCTPVQANTIPLLCSYKDVAVDAA 279
            M+S  PN ALT+ RFSDL PPLSEPVL+AL+ +GF FCTPVQA TIPLLCS+KDVAVDAA
Sbjct: 1    MDSEFPNKALTSVRFSDLNPPLSEPVLQALSHSGFDFCTPVQAATIPLLCSFKDVAVDAA 60

Query: 280  TGSGKTLAFLVPLVEILRRSSTPPKPHQVMGMVISPTRELSSQIFHVAQPFISTLSNVKP 459
            TGSGKTLAF++PLVEILRRSS+ PKPH+V+G++ISPTRELS+QI+HVAQ FISTL NVK 
Sbjct: 61   TGSGKTLAFVIPLVEILRRSSSHPKPHKVLGIIISPTRELSTQIYHVAQSFISTLMNVKS 120

Query: 460  ILLVGGVEVKSDMRKIEEEGANLLIGTPGRLYDIMDRMGILDFRNLEILILDEADRLLDM 639
            +LLVGG EVK+D++KIEEEGAN+LIGTPGRLYDIM+RM +LD +NLEILILDEADRLLDM
Sbjct: 121  MLLVGGAEVKTDIKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDM 180

Query: 640  GFQKQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKSIDGIXXXX 819
            GFQKQITSIIS LPKLRRTGLFSATQTEA+EELAKAGLRNPVRVEVRAETKS  G     
Sbjct: 181  GFQKQITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSK 240

Query: 820  XXXXXXXXXGLHLEYLECEADKKPSQLLDLLVKNKSKKIIIYYMTCASVDYWGVVLPHLA 999
                     GLH+EYLECE DKKPSQLLD+L+KN+SKKIIIY+MTCA VDYWG VLP L+
Sbjct: 241  QPESSKTPSGLHIEYLECEEDKKPSQLLDILIKNRSKKIIIYFMTCACVDYWGAVLPCLS 300

Query: 1000 ALKNFSIISLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQD 1179
             LK FS+I LHGKMKQ+AREKALASFT+LS+GILLCTDVAARGLDIPGVDCIVQYDPPQD
Sbjct: 301  VLKGFSLIPLHGKMKQSAREKALASFTTLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD 360

Query: 1180 PNVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLEERKSFDEASDVVPEIRS 1359
            PNVFIHRVGRTARLG+QG A+VFLLPKEE+YVEFLRIRRVPL+ER   D+A+DVVP+IRS
Sbjct: 361  PNVFIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICSDDATDVVPQIRS 420

Query: 1360 AAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPSMPEVKHH 1539
            AAKKDRDVMEKG++AFVSYIRAYKEHHCSYIFRWKELEIGKL  GFGLLQLPSMPEVKHH
Sbjct: 421  AAKKDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHH 480

Query: 1540 SLS 1548
            SLS
Sbjct: 481  SLS 483


>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 592

 Score =  790 bits (2041), Expect = 0.0
 Identities = 401/480 (83%), Positives = 438/480 (91%)
 Frame = +1

Query: 109  SNPNGALTNTRFSDLKPPLSEPVLEALTQAGFQFCTPVQANTIPLLCSYKDVAVDAATGS 288
            S PN ALT TRF+DL PPLSE V+ ALTQAGF++CTPVQA TIPLLC YKDVAVDAATGS
Sbjct: 7    SYPNRALTETRFADLHPPLSESVVHALTQAGFEYCTPVQAATIPLLCRYKDVAVDAATGS 66

Query: 289  GKTLAFLVPLVEILRRSSTPPKPHQVMGMVISPTRELSSQIFHVAQPFISTLSNVKPILL 468
            GKTLAF+VPLVEILRR S+P K HQVMG+++SPTRELSSQI++VAQPFI TLSNVK +LL
Sbjct: 67   GKTLAFVVPLVEILRRLSSPIKLHQVMGIILSPTRELSSQIYNVAQPFIETLSNVKSMLL 126

Query: 469  VGGVEVKSDMRKIEEEGANLLIGTPGRLYDIMDRMGILDFRNLEILILDEADRLLDMGFQ 648
            VGGV+VK+D++KIEEEGAN+LIGTPGRL+DIM+R+ ILDFRNLE+LILDEADRLLDMGFQ
Sbjct: 127  VGGVDVKADVKKIEEEGANILIGTPGRLFDIMERVDILDFRNLEVLILDEADRLLDMGFQ 186

Query: 649  KQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKSIDGIXXXXXXX 828
            KQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRA+TKS++         
Sbjct: 187  KQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAQTKSLNE-SASSQLS 245

Query: 829  XXXXXXGLHLEYLECEADKKPSQLLDLLVKNKSKKIIIYYMTCASVDYWGVVLPHLAALK 1008
                  GL LEYLECEAD KPS L+ LL KNKSKKII+Y+MTCA VDYWGVVLP L ALK
Sbjct: 246  SSKTPSGLQLEYLECEADMKPSHLVSLLNKNKSKKIIVYFMTCACVDYWGVVLPRLTALK 305

Query: 1009 NFSIISLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNV 1188
            +FS+I LHGKMKQTAR+KALASFTSL+SGILLCTDVAARGLDIPGVDCIVQYDPPQDPNV
Sbjct: 306  DFSLIPLHGKMKQTARDKALASFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNV 365

Query: 1189 FIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLEERKSFDEASDVVPEIRSAAK 1368
            FIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPL+E K  D+A DVVP+IRSAAK
Sbjct: 366  FIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLQEMKITDDAPDVVPQIRSAAK 425

Query: 1369 KDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPSMPEVKHHSLS 1548
            KDRDVMEKGLRAFVS+IRAYKEHHCSYIFRWKELE+GKLGMG+GLLQLPSMPEVKHHSLS
Sbjct: 426  KDRDVMEKGLRAFVSFIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVKHHSLS 485


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