BLASTX nr result

ID: Panax21_contig00000003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000003
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166302.1| PREDICTED: FACT complex subunit SSRP1-like, ...   225   3e-57
ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [...   225   3e-57
emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]   222   3e-56
ref|XP_002517473.1| structure-specific recognition protein, puta...   221   4e-56
ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...   221   4e-56

>ref|XP_004166302.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
           sativus]
          Length = 327

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/126 (86%), Positives = 117/126 (92%)
 Frame = +2

Query: 2   EVDKTEISGLTWMKVPRSNQLGILTRDGLKYKFTGFRDQDVSSLTSFFQTACGITPEEKQ 181
           EVDK +I G+TWMKVPRSNQLGI  +DGL YKF GFRDQD+SSLT FFQ+ CGI PEEKQ
Sbjct: 42  EVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQ 101

Query: 182 LSVSGKNWGEVDLNGNMLSFLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANE 361
           LSVSG+NWGEVDLNGNML+FLVGSKQAFEVSLADV+QTQLQGKNDVMLEFHVDDTTGANE
Sbjct: 102 LSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANE 161

Query: 362 KDSLME 379
           KDSLME
Sbjct: 162 KDSLME 167


>ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
          Length = 642

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/126 (86%), Positives = 117/126 (92%)
 Frame = +2

Query: 2   EVDKTEISGLTWMKVPRSNQLGILTRDGLKYKFTGFRDQDVSSLTSFFQTACGITPEEKQ 181
           EVDK +I G+TWMKVPRSNQLGI  +DGL YKF GFRDQD+SSLT FFQ+ CGI PEEKQ
Sbjct: 42  EVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQ 101

Query: 182 LSVSGKNWGEVDLNGNMLSFLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANE 361
           LSVSG+NWGEVDLNGNML+FLVGSKQAFEVSLADV+QTQLQGKNDVMLEFHVDDTTGANE
Sbjct: 102 LSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANE 161

Query: 362 KDSLME 379
           KDSLME
Sbjct: 162 KDSLME 167


>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
          Length = 644

 Score =  222 bits (565), Expect = 3e-56
 Identities = 104/126 (82%), Positives = 120/126 (95%)
 Frame = +2

Query: 2   EVDKTEISGLTWMKVPRSNQLGILTRDGLKYKFTGFRDQDVSSLTSFFQTACGITPEEKQ 181
           EVDK++I G+TWMKVPR+NQLG+  +DGL YKFTGFR+QDV++LT+FFQ +CG+ PEEKQ
Sbjct: 42  EVDKSDIVGVTWMKVPRTNQLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGJNPEEKQ 101

Query: 182 LSVSGKNWGEVDLNGNMLSFLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANE 361
           LSVSG+NWGEVDLNGNML+FLVGSKQAFEVSLADVSQTQ+QGKNDV+LEFHVDDTTGANE
Sbjct: 102 LSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANE 161

Query: 362 KDSLME 379
           KDSLME
Sbjct: 162 KDSLME 167


>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score =  221 bits (564), Expect = 4e-56
 Identities = 107/126 (84%), Positives = 119/126 (94%)
 Frame = +2

Query: 2   EVDKTEISGLTWMKVPRSNQLGILTRDGLKYKFTGFRDQDVSSLTSFFQTACGITPEEKQ 181
           EVDK +I+GLTWMKVPR+NQLG+  +DGL YKFTGFRDQD ++LTSFFQ+ CGIT EEKQ
Sbjct: 42  EVDKADIAGLTWMKVPRTNQLGVRIKDGLFYKFTGFRDQDHANLTSFFQSNCGITLEEKQ 101

Query: 182 LSVSGKNWGEVDLNGNMLSFLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANE 361
           LSVSG+NWGEVDLNGNML+FLVGSKQAFEVSLADVSQTQ+QGKNDV+LEFHVDDTTGANE
Sbjct: 102 LSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANE 161

Query: 362 KDSLME 379
           KDSLME
Sbjct: 162 KDSLME 167


>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
           gi|296082859|emb|CBI22160.3| unnamed protein product
           [Vitis vinifera]
          Length = 644

 Score =  221 bits (564), Expect = 4e-56
 Identities = 104/126 (82%), Positives = 120/126 (95%)
 Frame = +2

Query: 2   EVDKTEISGLTWMKVPRSNQLGILTRDGLKYKFTGFRDQDVSSLTSFFQTACGITPEEKQ 181
           EVDK++I G+TWMKVPR+NQLG+  +DGL YKFTGFR+QDV++LT+FFQ +CG+ PEEKQ
Sbjct: 42  EVDKSDIVGVTWMKVPRTNQLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGLNPEEKQ 101

Query: 182 LSVSGKNWGEVDLNGNMLSFLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANE 361
           LSVSG+NWGEVDLNGNML+FLVGSKQAFEVSLADVSQTQ+QGKNDV+LEFHVDDTTGANE
Sbjct: 102 LSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANE 161

Query: 362 KDSLME 379
           KDSLME
Sbjct: 162 KDSLME 167


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