BLASTX nr result
ID: Panax21_contig00000002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000002
(1820 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 486 0.0
ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 476 0.0
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 466 0.0
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata] 466 0.0
ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|2... 460 0.0
>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
vinifera]
Length = 711
Score = 486 bits (1251), Expect(2) = 0.0
Identities = 258/340 (75%), Positives = 281/340 (82%)
Frame = -1
Query: 1274 KDHIDRGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPVWV 1095
KDHI+RGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVED +KVQTLLFSATLP WV
Sbjct: 259 KDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSATLPGWV 318
Query: 1094 KQISSRFLKPDKKTADLVGNERMKASADVRHIVIPCSGSARAQLIPDIIRCYSSGGRTII 915
K+ISSRFLKP KTADLVGNE+MKAS +VRHIV+PCS SAR+Q+IPD+IRCYSSGGRTII
Sbjct: 319 KEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQVIPDVIRCYSSGGRTII 378
Query: 914 FTETKDSASQLAGILPGARALHGDIQQATREVTLSGFRSGKFMTLVATNVAARGLDINDV 735
FTETKDSAS+LAG+LPGARALHGDIQQ+ REVTLSGFRSGKFMTLVATNVAARGLDINDV
Sbjct: 379 FTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDINDV 438
Query: 734 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNFSRIERESGVKFEHXXXXX 555
QLIIQCEPPRDVEAYIHRSGRTGRAGN+GVAVML+DPRRSN S+IERESGVKFEH
Sbjct: 439 QLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFDPRRSNISKIERESGVKFEHVSAPQ 498
Query: 554 XXXXXXXAGLEAAETITEVSDRSEVKKF*S*EXXXXXXXXXXXXXXXXXXXXXXXXXXKA 375
AG+EAA TIT+VSD S + F S KA
Sbjct: 499 PADIAKSAGVEAAGTITQVSD-SVIPAFKS----------AAEELLNTSGLSAVELLAKA 547
Query: 374 LAKTTGYTEIKSRSLLTSMENFATVLLKAGRPIYTPSVAY 255
LAK +GYTEIKSRSLL S++N TVLL+AG+PIYTPS AY
Sbjct: 548 LAKASGYTEIKSRSLLASLDNHVTVLLEAGKPIYTPSFAY 587
Score = 212 bits (539), Expect(2) = 0.0
Identities = 108/138 (78%), Positives = 120/138 (86%)
Frame = -3
Query: 1803 KNKVKLMELDGIXXXXXXXENPNAVSNFRISEPLRNALKSRGIEALFPIQAMTFNTILDG 1624
K K+K+ E++ ENPNA+SNFRISEPLR LKS+GIEALFPIQAMTF+TILDG
Sbjct: 99 KKKLKVPEME--EEEGKAEENPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDG 156
Query: 1623 SDLVGRARTGQGKTLAFVLPILESLTNGPSKASRKTGYGRAPSVLVLLPTRELATQVSAD 1444
SDLVGRARTGQGKTLAFVLPILESL NGP++ SRKTGYGR P VLVLLPTRELATQV AD
Sbjct: 157 SDLVGRARTGQGKTLAFVLPILESLINGPNRGSRKTGYGRPPCVLVLLPTRELATQVYAD 216
Query: 1443 FEIYGGALGLTSCCLYGG 1390
F++YGGA+GLTSCCLYGG
Sbjct: 217 FDVYGGAIGLTSCCLYGG 234
Score = 67.8 bits (164), Expect = 9e-09
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2
Query: 124 TADGKGAVFDVSADDLDTFLAGQENAANVSLEVVKELPPLQ 2
TADG GAVFDV+ +DLD FLAGQENAANVSLEV+K LP LQ
Sbjct: 608 TADGNGAVFDVATEDLDAFLAGQENAANVSLEVLKALPRLQ 648
>ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
Length = 693
Score = 476 bits (1226), Expect(2) = 0.0
Identities = 253/340 (74%), Positives = 274/340 (80%)
Frame = -1
Query: 1274 KDHIDRGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPVWV 1095
KDHI++GNID S LKFRVLDEADEMLRMGFVEDVE+ILGKVE+ NKVQTLLFSATLP WV
Sbjct: 253 KDHIEKGNIDLSQLKFRVLDEADEMLRMGFVEDVEMILGKVENVNKVQTLLFSATLPDWV 312
Query: 1094 KQISSRFLKPDKKTADLVGNERMKASADVRHIVIPCSGSARAQLIPDIIRCYSSGGRTII 915
KQI++RFLKPDKKTADLVGN +MKAS +VRHIV+PC+ SARAQLIPDIIRCYSSGGRTI+
Sbjct: 313 KQIAARFLKPDKKTADLVGNTKMKASINVRHIVLPCTSSARAQLIPDIIRCYSSGGRTIV 372
Query: 914 FTETKDSASQLAGILPGARALHGDIQQATREVTLSGFRSGKFMTLVATNVAARGLDINDV 735
FTETK+SASQLAGIL GA+ALHGDIQQ+TREVTLSGFRSGKFMTLVATNVAARGLDINDV
Sbjct: 373 FTETKESASQLAGILTGAKALHGDIQQSTREVTLSGFRSGKFMTLVATNVAARGLDINDV 432
Query: 734 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNFSRIERESGVKFEHXXXXX 555
QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP+RSN SRIERESGVKFEH
Sbjct: 433 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSNISRIERESGVKFEHVSAPQ 492
Query: 554 XXXXXXXAGLEAAETITEVSDRSEVKKF*S*EXXXXXXXXXXXXXXXXXXXXXXXXXXKA 375
EAAE I +VSD S V F S KA
Sbjct: 493 PDDIAKAVSGEAAEMIIQVSD-SVVPAFKS----------AAEDLLNNSGLPVIELLAKA 541
Query: 374 LAKTTGYTEIKSRSLLTSMENFATVLLKAGRPIYTPSVAY 255
LAK GYTE+K RSLLTSMEN+ T+LL+ G+PIYT S AY
Sbjct: 542 LAKAVGYTEVKQRSLLTSMENYVTLLLETGKPIYTQSFAY 581
Score = 206 bits (523), Expect(2) = 0.0
Identities = 99/118 (83%), Positives = 111/118 (94%)
Frame = -3
Query: 1743 NPNAVSNFRISEPLRNALKSRGIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLP 1564
+PNA+SNFRISEPLR LK +GIE+LFPIQAMTF+T+LDGSDLVGRARTGQGKTLAFVLP
Sbjct: 111 DPNALSNFRISEPLRQKLKEKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLP 170
Query: 1563 ILESLTNGPSKASRKTGYGRAPSVLVLLPTRELATQVSADFEIYGGALGLTSCCLYGG 1390
ILESL NGP+KASRKTG+GR PSVLVLLPTRELA QV ADF++YGGA+GL+SCCLYGG
Sbjct: 171 ILESLINGPTKASRKTGFGRTPSVLVLLPTRELACQVHADFDVYGGAMGLSSCCLYGG 228
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -2
Query: 124 TADGKGAVFDVSADDLDTFLAGQENAANVSLEVVKELPPLQ 2
TADG G VFDV+A DLD +L GQENA+NVSLE+VK LP LQ
Sbjct: 602 TADGNGVVFDVAAKDLDIYLNGQENASNVSLEIVKTLPQLQ 642
>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
Length = 697
Score = 466 bits (1200), Expect(2) = 0.0
Identities = 247/340 (72%), Positives = 270/340 (79%)
Frame = -1
Query: 1274 KDHIDRGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPVWV 1095
KDHI++GNID S LKFRVLDEADEMLRMGFVEDVE+ILGKVE+ NKVQTLLFSATLP WV
Sbjct: 258 KDHIEKGNIDLSQLKFRVLDEADEMLRMGFVEDVEMILGKVENVNKVQTLLFSATLPDWV 317
Query: 1094 KQISSRFLKPDKKTADLVGNERMKASADVRHIVIPCSGSARAQLIPDIIRCYSSGGRTII 915
KQI+ +FLKPDKKTADLVGN +MKAS +VRHIV+PC+ SARAQLIPDIIRCYSSGGRTI+
Sbjct: 318 KQIALKFLKPDKKTADLVGNTKMKASTNVRHIVLPCTSSARAQLIPDIIRCYSSGGRTIV 377
Query: 914 FTETKDSASQLAGILPGARALHGDIQQATREVTLSGFRSGKFMTLVATNVAARGLDINDV 735
FTETK+ ASQLAGIL GA+ALHGDIQQ+TREVTLSGFRSGKFMTLVATNVAARGLDINDV
Sbjct: 378 FTETKECASQLAGILNGAKALHGDIQQSTREVTLSGFRSGKFMTLVATNVAARGLDINDV 437
Query: 734 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNFSRIERESGVKFEHXXXXX 555
QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP+RSN RIERESGVKFEH
Sbjct: 438 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSNIPRIERESGVKFEHVSAPQ 497
Query: 554 XXXXXXXAGLEAAETITEVSDRSEVKKF*S*EXXXXXXXXXXXXXXXXXXXXXXXXXXKA 375
EAAE I +VSD S V F S KA
Sbjct: 498 PDDIAKAVSGEAAEMIIQVSD-SVVPAFKS----------AAEELLNSSGLPVIELLAKA 546
Query: 374 LAKTTGYTEIKSRSLLTSMENFATVLLKAGRPIYTPSVAY 255
LAK GYT++K RSLLTSMEN+ T++L+ G+PIYT S Y
Sbjct: 547 LAKAVGYTDVKQRSLLTSMENYVTLVLETGKPIYTQSYGY 586
Score = 207 bits (526), Expect(2) = 0.0
Identities = 99/118 (83%), Positives = 111/118 (94%)
Frame = -3
Query: 1743 NPNAVSNFRISEPLRNALKSRGIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLP 1564
+PNA+SNFRISEPLR LK +GIE+LFPIQAMTF+T+LDGSDLVGRARTGQGKTLAFVLP
Sbjct: 116 DPNAISNFRISEPLREKLKEKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLP 175
Query: 1563 ILESLTNGPSKASRKTGYGRAPSVLVLLPTRELATQVSADFEIYGGALGLTSCCLYGG 1390
ILESL NGP+K++RKTGYGR PSVLVLLPTRELA QV ADFE+YGGA+GL+SCCLYGG
Sbjct: 176 ILESLINGPAKSARKTGYGRTPSVLVLLPTRELACQVHADFEVYGGAMGLSSCCLYGG 233
Score = 60.5 bits (145), Expect = 1e-06
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2
Query: 124 TADGKGAVFDVSADDLDTFLAGQENAANVSLEVVKELPPLQ 2
TADG G VFDV A DLD +L GQENA+NV LEVVK LP LQ
Sbjct: 607 TADGNGVVFDVPAKDLDIYLNGQENASNVCLEVVKTLPQLQ 647
>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
Length = 713
Score = 466 bits (1198), Expect(2) = 0.0
Identities = 248/340 (72%), Positives = 270/340 (79%)
Frame = -1
Query: 1274 KDHIDRGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPVWV 1095
KDHI+RGNID S LKFRVLDEADEMLRMGFVEDVELILGKVE+ NKVQTLLFSATLP WV
Sbjct: 269 KDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVENVNKVQTLLFSATLPDWV 328
Query: 1094 KQISSRFLKPDKKTADLVGNERMKASADVRHIVIPCSGSARAQLIPDIIRCYSSGGRTII 915
K I+++FLKPDKKTADLVGN +MKAS +VRHIV+PCS AR+QLIPDIIRCYSSGGRTII
Sbjct: 329 KHIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAPARSQLIPDIIRCYSSGGRTII 388
Query: 914 FTETKDSASQLAGILPGARALHGDIQQATREVTLSGFRSGKFMTLVATNVAARGLDINDV 735
FTETK+SASQLAG+LPGARALHGDIQQA REVTL GFRSGKFMTLVATNVAARGLDINDV
Sbjct: 389 FTETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRSGKFMTLVATNVAARGLDINDV 448
Query: 734 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNFSRIERESGVKFEHXXXXX 555
QLIIQCE PR+VE+YIHRSGRTGRAGNTGVA LYDP+RSN S+IERESGVKFEH
Sbjct: 449 QLIIQCEFPREVESYIHRSGRTGRAGNTGVAGTLYDPKRSNISKIERESGVKFEHISAPR 508
Query: 554 XXXXXXXAGLEAAETITEVSDRSEVKKF*S*EXXXXXXXXXXXXXXXXXXXXXXXXXXKA 375
G EAAE IT+VSD S + F KA
Sbjct: 509 PDDIAKAVGGEAAEMITQVSD-SVIPAF----------KETAEELLKSSGLTVVELLAKA 557
Query: 374 LAKTTGYTEIKSRSLLTSMENFATVLLKAGRPIYTPSVAY 255
LAK GYTEIK RSLLTSMEN+ T+LL+ G+PI+TPS AY
Sbjct: 558 LAKAVGYTEIKQRSLLTSMENYVTLLLEIGKPIFTPSFAY 597
Score = 199 bits (505), Expect(2) = 0.0
Identities = 97/118 (82%), Positives = 108/118 (91%)
Frame = -3
Query: 1743 NPNAVSNFRISEPLRNALKSRGIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLP 1564
+PNAVS RISEPLR LK +GIE+LFPIQAMTF+ +LDGSDLVGRARTGQGKTLAFVLP
Sbjct: 127 DPNAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDLVLDGSDLVGRARTGQGKTLAFVLP 186
Query: 1563 ILESLTNGPSKASRKTGYGRAPSVLVLLPTRELATQVSADFEIYGGALGLTSCCLYGG 1390
ILESL NGP+K+SRKTGYGR PSVLVLLPTRELA +V ADFE+YGGA+GL+SCCLYGG
Sbjct: 187 ILESLINGPTKSSRKTGYGRTPSVLVLLPTRELACRVHADFEVYGGAMGLSSCCLYGG 244
Score = 66.2 bits (160), Expect = 3e-08
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -2
Query: 124 TADGKGAVFDVSADDLDTFLAGQENAANVSLEVVKELPPLQ 2
TADG GAVFDV A+DL+T+L+GQENAANVSLEV+K LP LQ
Sbjct: 618 TADGNGAVFDVPAEDLNTYLSGQENAANVSLEVLKALPRLQ 658
>ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|222859536|gb|EEE97083.1|
predicted protein [Populus trichocarpa]
Length = 652
Score = 460 bits (1184), Expect(2) = 0.0
Identities = 243/340 (71%), Positives = 272/340 (80%)
Frame = -1
Query: 1274 KDHIDRGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPVWV 1095
KDHI++GNID S LKFRVLDE+DEMLRMGFVEDVELILGKVED KVQTLLFSATLP WV
Sbjct: 203 KDHIEKGNIDLSLLKFRVLDESDEMLRMGFVEDVELILGKVEDVRKVQTLLFSATLPDWV 262
Query: 1094 KQISSRFLKPDKKTADLVGNERMKASADVRHIVIPCSGSARAQLIPDIIRCYSSGGRTII 915
K ISSRFLKP KKT DLVGNE+MKAS +VRHIV+PCS +A Q+IPD+I CY SGGRTII
Sbjct: 263 KNISSRFLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTAAMPQVIPDVISCYGSGGRTII 322
Query: 914 FTETKDSASQLAGILPGARALHGDIQQATREVTLSGFRSGKFMTLVATNVAARGLDINDV 735
FTE ++SA++LAG+LPGARALHG+IQQ+ REVTLSGFRSGKF+TLVATNVAARGLDINDV
Sbjct: 323 FTEKRESANELAGLLPGARALHGEIQQSKREVTLSGFRSGKFLTLVATNVAARGLDINDV 382
Query: 734 QLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNFSRIERESGVKFEHXXXXX 555
QLIIQCEPP DVEAYIHRSGRTGRAGN+GVAVMLYDPRRSN S+I+RESGVKFEH
Sbjct: 383 QLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRSNISKIQRESGVKFEHITAPR 442
Query: 554 XXXXXXXAGLEAAETITEVSDRSEVKKF*S*EXXXXXXXXXXXXXXXXXXXXXXXXXXKA 375
AG+ AAETIT+VSD S + F S KA
Sbjct: 443 AEDIAKAAGVGAAETITQVSD-SVIPAFKS----------AAENLLSTSGLSAVELLAKA 491
Query: 374 LAKTTGYTEIKSRSLLTSMENFATVLLKAGRPIYTPSVAY 255
LAK TGYTEIKSRSLLTSM+N T+LL++G+PIYTPS A+
Sbjct: 492 LAKATGYTEIKSRSLLTSMDNHVTLLLESGKPIYTPSFAF 531
Score = 202 bits (513), Expect(2) = 0.0
Identities = 105/143 (73%), Positives = 116/143 (81%)
Frame = -3
Query: 1818 VNLKDKNKVKLMELDGIXXXXXXXENPNAVSNFRISEPLRNALKSRGIEALFPIQAMTFN 1639
VNLK K+K + + E+PNAV+ FRISEPLR ALK RGIEALFPIQA TF
Sbjct: 36 VNLKKKSKKAKVVEEEEDEEEVKAEDPNAVTRFRISEPLREALKKRGIEALFPIQARTFE 95
Query: 1638 TILDGSDLVGRARTGQGKTLAFVLPILESLTNGPSKASRKTGYGRAPSVLVLLPTRELAT 1459
IL+G DLVGRARTGQGKTLAFVLPILESL NGP+KASRKTGYGR PSVLVLLPTRELAT
Sbjct: 96 DILNGCDLVGRARTGQGKTLAFVLPILESLVNGPAKASRKTGYGRPPSVLVLLPTRELAT 155
Query: 1458 QVSADFEIYGGALGLTSCCLYGG 1390
QV DF++YGGA+GL SCC+YGG
Sbjct: 156 QVFEDFKVYGGAVGLNSCCVYGG 178
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -2
Query: 124 TADGKGAVFDVSADDLDTFLAGQENAANVSLEVVKELPPLQ 2
TADG GAVFDV +D+DTFLA QENAA V++EVVK LP LQ
Sbjct: 552 TADGNGAVFDVKKEDVDTFLAAQENAAGVNIEVVKALPSLQ 592