BLASTX nr result

ID: Paeonia25_contig00045856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00045856
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004514720.1| PREDICTED: lipoyl synthase 2, chloroplastic-...    64   2e-08
ref|XP_006371583.1| hypothetical protein POPTR_0019s13380g [Popu...    60   3e-07
ref|XP_007043178.1| Radical SAM superfamily protein isoform 3, p...    58   1e-06
ref|XP_007043176.1| Radical SAM superfamily protein isoform 1 [T...    58   1e-06
ref|XP_002319912.1| hypothetical protein POPTR_0013s13960g [Popu...    57   2e-06
ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic [G...    57   3e-06

>ref|XP_004514720.1| PREDICTED: lipoyl synthase 2, chloroplastic-like [Cicer arietinum]
          Length = 385

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = -1

Query: 296 MIHQSLPRPCSISIIT-PFSKPLKSTTPCCWPLRIRCETLGSSTKIDTEHXXXXXXXXXS 120
           M HQSL +PCS S  + PF + +KS++       +RCE    S     +           
Sbjct: 1   MYHQSLFQPCSFSFSSIPFPRTIKSSSFTS-TFTVRCEAKDPSLSPSAQQPLPLSA---- 55

Query: 119 EAVKLFGTDGGSNSKSVGSYPGGMGPYTGRDPSVKKPEW 3
              KL  +D     K+ G YPGG+GP+TGRDP+VKKPEW
Sbjct: 56  -VAKLMESD-----KNSGPYPGGLGPFTGRDPNVKKPEW 88


>ref|XP_006371583.1| hypothetical protein POPTR_0019s13380g [Populus trichocarpa]
           gi|308191448|sp|B9N2B0.1|LISC2_POPTR RecName:
           Full=Lipoyl synthase 2, chloroplastic; AltName:
           Full=Lipoate synthase 2; Short=LS 2; Short=Lip-syn 2;
           AltName: Full=Lipoate synthase, plastidial 2;
           Short=LIP1p 2; AltName: Full=Lipoic acid synthase 2;
           Flags: Precursor gi|550317462|gb|ERP49380.1|
           hypothetical protein POPTR_0019s13380g [Populus
           trichocarpa]
          Length = 397

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
 Frame = -1

Query: 296 MIHQSLPRPC-SISIITPFSKPLKSTTPCCWPLRIRCETLG--SSTKIDTEHXXXXXXXX 126
           MI QSL +P  S+SI  P +   KS+  C +  +IRCE++   S TKID +H        
Sbjct: 1   MIEQSLSKPSFSLSIPIPKAPKSKSSFFCSYS-KIRCESVDYPSLTKIDAKHPQNSTTIN 59

Query: 125 XSEAVKLFGTDGGSNSKSVGSYPGG--MGPYTGRDPSVKKPEW 3
              +      D  +N K    YPGG  MGPYTGRD + KKPEW
Sbjct: 60  NGSSSSA-SVDLKNNEKGPYPYPGGGKMGPYTGRDLNEKKPEW 101


>ref|XP_007043178.1| Radical SAM superfamily protein isoform 3, partial [Theobroma
           cacao] gi|508707113|gb|EOX99009.1| Radical SAM
           superfamily protein isoform 3, partial [Theobroma cacao]
          Length = 264

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = -1

Query: 284 SLPRPCSISIITPFSKPLKSTTPCCWPLRIRCETLGSSTKIDTEHXXXXXXXXXSEAVKL 105
           S+ +P SIS   P  KP K +      ++IRCE+  S++KID +            A KL
Sbjct: 4   SMSKP-SISASIPIPKPSKPSWSYS-QVKIRCESSDSASKIDVKRPQPTSLSA---AGKL 58

Query: 104 FGTDGGSNSKSVGSYPGGM---GPYTGRDPSVKKPEW 3
             +D  +     G YPGGM   GP+TGRDP+VKKPEW
Sbjct: 59  MESDAKN-----GPYPGGMPKMGPFTGRDPNVKKPEW 90


>ref|XP_007043176.1| Radical SAM superfamily protein isoform 1 [Theobroma cacao]
           gi|590689258|ref|XP_007043177.1| Radical SAM superfamily
           protein isoform 1 [Theobroma cacao]
           gi|508707111|gb|EOX99007.1| Radical SAM superfamily
           protein isoform 1 [Theobroma cacao]
           gi|508707112|gb|EOX99008.1| Radical SAM superfamily
           protein isoform 1 [Theobroma cacao]
          Length = 387

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = -1

Query: 284 SLPRPCSISIITPFSKPLKSTTPCCWPLRIRCETLGSSTKIDTEHXXXXXXXXXSEAVKL 105
           S+ +P SIS   P  KP K +      ++IRCE+  S++KID +            A KL
Sbjct: 4   SMSKP-SISASIPIPKPSKPSWSYS-QVKIRCESSDSASKIDVKRPQPTSLSA---AGKL 58

Query: 104 FGTDGGSNSKSVGSYPGGM---GPYTGRDPSVKKPEW 3
             +D  +     G YPGGM   GP+TGRDP+VKKPEW
Sbjct: 59  MESDAKN-----GPYPGGMPKMGPFTGRDPNVKKPEW 90


>ref|XP_002319912.1| hypothetical protein POPTR_0013s13960g [Populus trichocarpa]
           gi|308191445|sp|B9I666.1|LISC1_POPTR RecName:
           Full=Lipoyl synthase 1, chloroplastic; AltName:
           Full=Lipoate synthase 1; Short=LS 1; Short=Lip-syn 1;
           AltName: Full=Lipoate synthase, plastidial 1;
           Short=LIP1p 1; AltName: Full=Lipoic acid synthase 1;
           Flags: Precursor gi|222858288|gb|EEE95835.1|
           hypothetical protein POPTR_0013s13960g [Populus
           trichocarpa]
          Length = 376

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = -1

Query: 296 MIHQSLPRPCSISIITPFSKPLKSTTP-CCWPLRIRCETLG--SSTKIDTEHXXXXXXXX 126
           MI QSL +P S S+  P  +P KS +   C   +IRCE++   SS+KID +H        
Sbjct: 1   MIEQSLSKP-SFSLSIPIPQPPKSKSSFLCSYSKIRCESVDYPSSSKIDAKHPQ------ 53

Query: 125 XSEAVKLFGTDGGSNSKSVGSYPGGMGPYTGRDPSVKKPEW 3
               +    ++GG          G MG YTGRDP+VKKPEW
Sbjct: 54  ----ISSINSNGG----------GKMGSYTGRDPNVKKPEW 80


>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic [Glycine max]
          Length = 364

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/98 (38%), Positives = 46/98 (46%)
 Frame = -1

Query: 296 MIHQSLPRPCSISIITPFSKPLKSTTPCCWPLRIRCETLGSSTKIDTEHXXXXXXXXXSE 117
           MI QSL  P SI+  TP  K  +   P  W  RIRC+   SS  ++              
Sbjct: 1   MIRQSLYTPPSITFSTPSPKRHRFAPPS-W--RIRCDA--SSVSVE-------------- 41

Query: 116 AVKLFGTDGGSNSKSVGSYPGGMGPYTGRDPSVKKPEW 3
                        K VG YPGG+GP+TGRDP+ KKPEW
Sbjct: 42  ------------QKVVGPYPGGLGPHTGRDPNAKKPEW 67


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