BLASTX nr result

ID: Paeonia25_contig00044605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00044605
         (587 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   313   3e-83
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              313   3e-83
ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prun...   302   4e-80
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]     301   9e-80
ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containi...   301   1e-79
ref|XP_002305285.2| pentatricopeptide repeat-containing family p...   300   1e-79
ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily p...   291   7e-77
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   290   2e-76
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   290   2e-76
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   286   2e-75
gb|EYU21622.1| hypothetical protein MIMGU_mgv1a019624mg, partial...   285   5e-75
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi...   285   6e-75
ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, par...   281   7e-74
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi...   269   5e-70
ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutr...   268   8e-70
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ...   265   5e-69
ref|XP_002894392.1| pentatricopeptide repeat-containing protein ...   265   7e-69
ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containi...   265   9e-69
ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containi...   264   1e-68
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar...   264   2e-68

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  313 bits (801), Expect = 3e-83
 Identities = 142/189 (75%), Positives = 167/189 (88%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           DVDQLLYVLCKRKHV+ AQ+FFDKV  E  P+ K+Y IL+RGWG++GDSSEARKLF+EM 
Sbjct: 187 DVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMR 246

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ERGC+VDV+AYNS LEALCKGGN DEAYKLFREMG+ G+ PDA +Y+IFIRA CE NDIH
Sbjct: 247 ERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 306

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
            AF++LDRM+ YNLVP+V TYNC++KKLCK+EKV+EAY+LLDEM+ERGV+PD WSYN I 
Sbjct: 307 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQ 366

Query: 559 TFHCDHCEV 585
            FHCDHCEV
Sbjct: 367 AFHCDHCEV 375



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
 Frame = +1

Query: 103 FSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE----RGCSVDVLAYNSFLEALCKGGNG 270
           F  S +SY IL+     +G S +   ++D + +    R C +    +     A C+    
Sbjct: 110 FEHSKESYHILV---DILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLP 166

Query: 271 DEAYKLFREMGAKGVE----------------------------------PDAGTYAIFI 348
            +A + F +MG  GV+                                  P+A TY+I +
Sbjct: 167 GDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILM 226

Query: 349 RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 528
           R   +  D   A KL + M+      DV  YN +++ LCK   V+EAY+L  EM   G+ 
Sbjct: 227 RGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLA 286

Query: 529 PDAWSYNTILTFHCD 573
           PDA SY+  +  +C+
Sbjct: 287 PDACSYSIFIRAYCE 301



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDV 222
           C+   +  A Q  D+++ +   P+V +Y  +++   +     EA +L DEM+ERG S D+
Sbjct: 300 CEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDL 359

Query: 223 LAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDR 402
            +YN+     C     ++A +L   M  +   PD  TY + ++             +   
Sbjct: 360 WSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG 419

Query: 403 MKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
           M+     P   TY  ++   CK + K+EEA +  + M++ G+ P
Sbjct: 420 MEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPP 463


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  313 bits (801), Expect = 3e-83
 Identities = 142/189 (75%), Positives = 167/189 (88%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           DVDQLLYVLCKRKHV+ AQ+FFDKV  E  P+ K+Y IL+RGWG++GDSSEARKLF+EM 
Sbjct: 160 DVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMR 219

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ERGC+VDV+AYNS LEALCKGGN DEAYKLFREMG+ G+ PDA +Y+IFIRA CE NDIH
Sbjct: 220 ERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 279

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
            AF++LDRM+ YNLVP+V TYNC++KKLCK+EKV+EAY+LLDEM+ERGV+PD WSYN I 
Sbjct: 280 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQ 339

Query: 559 TFHCDHCEV 585
            FHCDHCEV
Sbjct: 340 AFHCDHCEV 348



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDV 222
           C+   +  A Q  D+++ +   P+V +Y  +++   +     EA +L DEM+ERG S D+
Sbjct: 273 CEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDL 332

Query: 223 LAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDR 402
            +YN+     C     ++A +L   M  +   PD  TY + ++             +   
Sbjct: 333 WSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG 392

Query: 403 MKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
           M+     P   TY  ++   CK + K+EEA +  + M++ G+ P
Sbjct: 393 MEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPP 436


>ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
           gi|462412057|gb|EMJ17106.1| hypothetical protein
           PRUPE_ppa004160mg [Prunus persica]
          Length = 526

 Score =  302 bits (774), Expect = 4e-80
 Identities = 139/189 (73%), Positives = 161/189 (85%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           D+DQL+Y LCKRKHV++A +FFDKVK  F  + K Y IL+RGWG+IGDS EARKLFDEM 
Sbjct: 187 DLDQLMYTLCKRKHVKYAHEFFDKVKSGFELNAKIYSILMRGWGDIGDSDEARKLFDEMT 246

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ERGC VDV AYNS+LEALCKGG  DEAYK+FR MG+ G +PDA TY+IFIRA CEANDIH
Sbjct: 247 ERGCLVDVPAYNSYLEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIH 306

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
             F++LDRMK YNL+P+V++YNC+IKKLCKN+KVEEAYELLDEM+ERGV PDAWSYN I 
Sbjct: 307 SVFRVLDRMKRYNLLPNVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQ 366

Query: 559 TFHCDHCEV 585
             HCDHCEV
Sbjct: 367 AHHCDHCEV 375



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
 Frame = +1

Query: 34  LYVLCKRKHVRHAQQFFDKVKFEFS-PSVKSYGILIRGWGEIGDSSEARKLFDEMLERGC 210
           L  LCK   V  A + F  +    + P   +Y I IR + E  D     ++ D M     
Sbjct: 261 LEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNL 320

Query: 211 SVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFK 390
             +V +YN  ++ LCK    +EAY+L  EM  +GV PDA +Y       C+  +++ A +
Sbjct: 321 LPNVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRALR 380

Query: 391 LLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILTFHC 570
           LL RMK  N  PD HTYN V+K L +  + + A E+ + M ERG  P   +Y+ ++   C
Sbjct: 381 LLSRMKKDNCKPDRHTYNMVLKLLIRIGRFDRATEVWESMGERGFYPSVSTYSVMIHGLC 440



 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
 Frame = +1

Query: 4   GGSSDDVDQLLYVL-----CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDS 165
           G +  D D   Y +     C+   +    +  D++K +   P+V SY  +I+   +    
Sbjct: 281 GSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNLLPNVYSYNCIIKKLCKNDKV 340

Query: 166 SEARKLFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIF 345
            EA +L DEM+ERG   D  +YN+     C     + A +L   M     +PD  TY + 
Sbjct: 341 EEAYELLDEMIERGVMPDAWSYNAIQAHHCDHCEVNRALRLLSRMKKDNCKPDRHTYNMV 400

Query: 346 IRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERG 522
           ++          A ++ + M      P V TY+ +I  LCK + K+EEA +  + M++ G
Sbjct: 401 LKLLIRIGRFDRATEVWESMGERGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEG 460

Query: 523 VNP 531
           + P
Sbjct: 461 IPP 463


>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
          Length = 529

 Score =  301 bits (771), Expect = 9e-80
 Identities = 135/189 (71%), Positives = 164/189 (86%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           D+DQLLY LCKRKHV+HA +FFDKVK  F PSVK++ ILIRGWG++GD+S AR+LFDEML
Sbjct: 192 DLDQLLYALCKRKHVKHAHEFFDKVKGGFEPSVKTFSILIRGWGDLGDASHARELFDEML 251

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           +RGC +DVLAYNS+LEALCKGG+ DEAY++FR M  KGV PDA TY++FIR  CEANDIH
Sbjct: 252 QRGCFLDVLAYNSYLEALCKGGSADEAYEIFRGMKEKGVSPDACTYSVFIRTYCEANDIH 311

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
             F++LDRM+ Y+L+P+V TYN +IKKLCKNEKV+EAY+LL+EM+E GV PD+WSYN IL
Sbjct: 312 SVFRVLDRMRRYDLLPNVFTYNLIIKKLCKNEKVDEAYQLLEEMIENGVRPDSWSYNAIL 371

Query: 559 TFHCDHCEV 585
            FHCDHCEV
Sbjct: 372 AFHCDHCEV 380



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 38/195 (19%)
 Frame = +1

Query: 103 FSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE----RGCSVDVLAYNSFLEALCKGGNG 270
           F  SV+SY IL+     +G S +   ++D +++    + C +    +     A C+    
Sbjct: 115 FEHSVESYHILV---DVLGSSKQFAVMWDLLMDVRESKCCEISPEIFWIVFRAYCRANLP 171

Query: 271 DEAYKLFREMGAKGV----------------------------------EPDAGTYAIFI 348
            +A + F  M   GV                                  EP   T++I I
Sbjct: 172 RDAIRAFNRMVEFGVKPCVHDLDQLLYALCKRKHVKHAHEFFDKVKGGFEPSVKTFSILI 231

Query: 349 RAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVN 528
           R   +  D   A +L D M       DV  YN  ++ LCK    +EAYE+   M E+GV+
Sbjct: 232 RGWGDLGDASHARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEAYEIFRGMKEKGVS 291

Query: 529 PDAWSYNTILTFHCD 573
           PDA +Y+  +  +C+
Sbjct: 292 PDACTYSVFIRTYCE 306


>ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 734

 Score =  301 bits (770), Expect = 1e-79
 Identities = 141/192 (73%), Positives = 160/192 (83%)
 Frame = +1

Query: 10  SSDDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFD 189
           S  D+D LLY LCKRKHV+HAQ+FFDKVK  F    K+Y IL+RGWG+I DS  ARKLFD
Sbjct: 322 SIHDLDHLLYTLCKRKHVKHAQEFFDKVKSGFELGAKTYSILMRGWGDICDSDNARKLFD 381

Query: 190 EMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEAN 369
           EM E+GC VDV AYNS+LEALCKGGN DEAYK+FREMG+KGVEPDAGTY+IFIRA CEAN
Sbjct: 382 EMTEKGCLVDVPAYNSYLEALCKGGNVDEAYKIFREMGSKGVEPDAGTYSIFIRAYCEAN 441

Query: 370 DIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYN 549
           DIH  F +LDRMK YNL+ +V TYNCVIKKLCKNE+VEEAY+LLDEM+E GV PD WSYN
Sbjct: 442 DIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNERVEEAYQLLDEMIEMGVKPDEWSYN 501

Query: 550 TILTFHCDHCEV 585
            I  +HC+H EV
Sbjct: 502 AIQAYHCEHGEV 513



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDV 222
           C+   +       D++K +    +V +Y  +I+   +     EA +L DEM+E G   D 
Sbjct: 438 CEANDIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNERVEEAYQLLDEMIEMGVKPDE 497

Query: 223 LAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDR 402
            +YN+     C+ G  ++A +L   M      PD  TY + ++          A  + +R
Sbjct: 498 WSYNAIQAYHCEHGEVNQALRLLSRMEKDSCMPDHHTYNMVLKLLIRIGRFDRATDVWER 557

Query: 403 MKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
           M      P V TY+ +I  LCK + K+EEA +  + M++ G+ P
Sbjct: 558 MGKRGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPP 601


>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550340729|gb|EEE85796.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 523

 Score =  300 bits (769), Expect = 1e-79
 Identities = 139/192 (72%), Positives = 167/192 (86%)
 Frame = +1

Query: 10  SSDDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFD 189
           S DD+D+LLYVLCK KHV+ AQQFFD+VK +F    K+Y IL+RGWG+IG++ EARK+FD
Sbjct: 182 SVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFD 241

Query: 190 EMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEAN 369
           EML RGC++DVLAYNS LEALCKGGN DEAYK+FRE+G+ GVEPDA +YAIFIRA CEAN
Sbjct: 242 EMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEAN 301

Query: 370 DIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYN 549
           +IH  F +LDRMK Y+LVP+V TYNC+IKKLCKN KVE+AY+LL EM+ERGV+PDAWSYN
Sbjct: 302 NIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYN 361

Query: 550 TILTFHCDHCEV 585
           TIL +HC+H EV
Sbjct: 362 TILAYHCEHSEV 373



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
 Frame = +1

Query: 46  CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDV 222
           C+  ++       D++K ++  P+V +Y  +I+   + G   +A +L  EM+ERG S D 
Sbjct: 298 CEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDA 357

Query: 223 LAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDR 402
            +YN+ L   C+    + A KL   M      PD  +Y + ++          A ++ + 
Sbjct: 358 WSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWES 417

Query: 403 MKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNPDAWSY----NTILTFH 567
           M      P V TY+ +I  LCK + K+EEA    + M++ G+ P A +     N ++ F 
Sbjct: 418 MGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFG 477

Query: 568 -CDHCEV 585
             DH E+
Sbjct: 478 LLDHIEI 484


>ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508779234|gb|EOY26490.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 520

 Score =  291 bits (746), Expect = 7e-77
 Identities = 130/192 (67%), Positives = 163/192 (84%)
 Frame = +1

Query: 10  SSDDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFD 189
           S  DVDQLL+VLCKRKHV+ AQ FFD+VK EF PS KSY IL+RGWG+IG++ +ARK+FD
Sbjct: 179 SIHDVDQLLFVLCKRKHVKQAQGFFDRVKHEFEPSAKSYSILVRGWGDIGEACQARKVFD 238

Query: 190 EMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEAN 369
           EM++RGCS+DVLAYN  LEALCK GN DEAYK+F  MG+  +E DA +Y++FIRA CEAN
Sbjct: 239 EMVQRGCSIDVLAYNCLLEALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEAN 298

Query: 370 DIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYN 549
           DIH AF++LDRM+ YNLVP++ TYNC+I+KLC N+KV+EAY+LL EM+ERG++PD WSYN
Sbjct: 299 DIHAAFRVLDRMRRYNLVPNLFTYNCIIRKLCNNDKVDEAYQLLTEMIERGISPDEWSYN 358

Query: 550 TILTFHCDHCEV 585
            IL +HC+H EV
Sbjct: 359 AILAYHCEHSEV 370



 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
 Frame = +1

Query: 31  LLYVLCKRKHVRHAQQFFDKV-KFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERG 207
           LL  LCK  +V  A + F  +          SY + IR + E  D   A ++ D M    
Sbjct: 255 LLEALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYN 314

Query: 208 CSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAF 387
              ++  YN  +  LC     DEAY+L  EM  +G+ PD  +Y   +   CE ++++ A 
Sbjct: 315 LVPNLFTYNCIIRKLCNNDKVDEAYQLLTEMIERGISPDEWSYNAILAYHCEHSEVNRAL 374

Query: 388 KLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILTFH 567
            L+ RM+     PD HTYN  +K L +  + + A EL + M  RG  P   +Y  ++   
Sbjct: 375 NLISRMEKNECFPDRHTYNMALKLLIRIGRFDRATELWESMANRGFYPSVSTYAVMIHGL 434

Query: 568 C 570
           C
Sbjct: 435 C 435



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
 Frame = +1

Query: 4   GGSSDDVDQLLYVL-----CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDS 165
           G S  ++D   Y +     C+   +  A +  D+++ +   P++ +Y  +IR        
Sbjct: 276 GSSRIELDACSYSVFIRAYCEANDIHAAFRVLDRMRRYNLVPNLFTYNCIIRKLCNNDKV 335

Query: 166 SEARKLFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIF 345
            EA +L  EM+ERG S D  +YN+ L   C+    + A  L   M      PD  TY + 
Sbjct: 336 DEAYQLLTEMIERGISPDEWSYNAILAYHCEHSEVNRALNLISRMEKNECFPDRHTYNMA 395

Query: 346 IRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERG 522
           ++          A +L + M      P V TY  +I  LCK   K+EEA    + M++ G
Sbjct: 396 LKLLIRIGRFDRATELWESMANRGFYPSVSTYAVMIHGLCKKRGKLEEACRYFEIMIDEG 455

Query: 523 VNP 531
           + P
Sbjct: 456 IPP 458


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  290 bits (742), Expect = 2e-76
 Identities = 130/190 (68%), Positives = 159/190 (83%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEM 195
           DD+D+LLY LCKRKHV HAQQFFDKVK  F+PSVK+Y IL RGWG +GDS+ A+K+FDEM
Sbjct: 187 DDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEM 246

Query: 196 LERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDI 375
            ERGC +DVLAYNS LEALCKGG  DEAYK+F EM + GV+PDA TY+IFIR++C+ ND+
Sbjct: 247 RERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDL 306

Query: 376 HLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTI 555
           H  +++L+R K  NL+P+V TYNCVIKKLCK++ VEEAY++LDEM+ERGV PD WSYN I
Sbjct: 307 HTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAI 366

Query: 556 LTFHCDHCEV 585
             +HCDH EV
Sbjct: 367 QAYHCDHSEV 376



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
 Frame = +1

Query: 109 PSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKL 288
           P+V +Y  +I+   +  +  EA ++ DEM+ERG + D  +YN+     C     + A  L
Sbjct: 323 PNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNL 382

Query: 289 FREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCK 468
            + M      PD  TY + ++          A ++ + M      P V TY  +I   CK
Sbjct: 383 VKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCK 442

Query: 469 NE-KVEEAYELLDEMLERGVNP 531
            + K+EEA +  + M++ G+ P
Sbjct: 443 KKWKLEEACKYFEMMIDEGIPP 464


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  290 bits (742), Expect = 2e-76
 Identities = 130/190 (68%), Positives = 159/190 (83%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEM 195
           DD+D+LLY LCKRKHV HAQQFFDKVK  F+PSVK+Y IL RGWG +GDS+ A+K+FDEM
Sbjct: 187 DDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEM 246

Query: 196 LERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDI 375
            ERGC +DVLAYNS LEALCKGG  DEAYK+F EM + GV+PDA TY+IFIR++C+ ND+
Sbjct: 247 RERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDL 306

Query: 376 HLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTI 555
           H  +++L+R K  NL+P+V TYNCVIKKLCK++ VEEAY++LDEM+ERGV PD WSYN I
Sbjct: 307 HTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAI 366

Query: 556 LTFHCDHCEV 585
             +HCDH EV
Sbjct: 367 QAYHCDHSEV 376



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
 Frame = +1

Query: 109 PSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKL 288
           P+V +Y  +I+   +  +  EA ++ DEM+ERG + D  +YN+     C     + A  L
Sbjct: 323 PNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNL 382

Query: 289 FREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCK 468
            + M      PD  TY + ++          A ++ + M      P V TY  +I   CK
Sbjct: 383 VKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCK 442

Query: 469 NE-KVEEAYELLDEMLERGVNP 531
            + K+EEA +  + M++ G+ P
Sbjct: 443 KKWKLEEACKYFEMMIDEGIPP 464


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  286 bits (733), Expect = 2e-75
 Identities = 130/190 (68%), Positives = 159/190 (83%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEM 195
           DD+DQLLYVLCKRKH +HAQQ FD+VK +F    K+Y IL+RGWG+IG+S  A K+FDEM
Sbjct: 180 DDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEM 239

Query: 196 LERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDI 375
            E+ C+VDVLAYNS LEA CKGG   EAYK+FREMG+ G++PDA T++IFIRA CEANDI
Sbjct: 240 REQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDI 299

Query: 376 HLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTI 555
           HLA+++LD MK Y+LVP+V TYNC+IKKLCK EKVEEAY+LL+E++ER   PDAWSYN I
Sbjct: 300 HLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAI 359

Query: 556 LTFHCDHCEV 585
           L +HC+H EV
Sbjct: 360 LAYHCEHSEV 369


>gb|EYU21622.1| hypothetical protein MIMGU_mgv1a019624mg, partial [Mimulus
           guttatus]
          Length = 510

 Score =  285 bits (730), Expect = 5e-75
 Identities = 135/191 (70%), Positives = 160/191 (83%), Gaps = 1/191 (0%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVKF-EFSPSVKSYGILIRGWGEIGDSSEARKLFDE 192
           DD+DQLLY LCKRKHV+ AQ+FFD+VK  E  P+VKSY IL++GWGEIGDS EA+KLFDE
Sbjct: 171 DDLDQLLYTLCKRKHVKQAQEFFDQVKGGELIPTVKSYSILMKGWGEIGDSGEAQKLFDE 230

Query: 193 MLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEAND 372
           MLER  +VD+LA+NS L+ALCKGG  DEAY+LF+ M  KG+EPDA +Y+IFIRA+C  ND
Sbjct: 231 MLEREYTVDLLAWNSVLDALCKGGKVDEAYELFQGMRTKGLEPDAYSYSIFIRASCSEND 290

Query: 373 IHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNT 552
           IH AF++LD MK  NL P+V TYNC+IK LCKN K++EAYELLDEMLERGV PD WSYNT
Sbjct: 291 IHSAFRVLDSMKRCNLAPNVFTYNCIIKSLCKNNKIDEAYELLDEMLERGVKPDTWSYNT 350

Query: 553 ILTFHCDHCEV 585
           +L FHCDH EV
Sbjct: 351 VLAFHCDHNEV 361



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
 Frame = +1

Query: 25  DQLLYVLCKRKHVRHAQQFFDKVKFE-FSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE 201
           + +L  LCK   V  A + F  ++ +   P   SY I IR      D   A ++ D M  
Sbjct: 244 NSVLDALCKGGKVDEAYELFQGMRTKGLEPDAYSYSIFIRASCSENDIHSAFRVLDSMKR 303

Query: 202 RGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHL 381
              + +V  YN  +++LCK    DEAY+L  EM  +GV+PD  +Y   +   C+ N+++ 
Sbjct: 304 CNLAPNVFTYNCIIKSLCKNNKIDEAYELLDEMLERGVKPDTWSYNTVLAFHCDHNEVNT 363

Query: 382 AFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILT 561
           A KL+ RM       D HTYN V+K L +  + +   ++   M ++G  P   +Y  ++ 
Sbjct: 364 ALKLILRMDKDGCERDRHTYNMVLKMLIRIGRFDRMEKVWYSMEKKGFYPTVSTYAVMIH 423

Query: 562 FHC 570
             C
Sbjct: 424 GLC 426



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 46/154 (29%), Positives = 77/154 (50%)
 Frame = +1

Query: 124 YGILIRGWGEIGDSSEARKLFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMG 303
           + I+ R +      S+A + F++ML+ G +  V   +  L  LCK  +  +A + F ++ 
Sbjct: 138 FWIVFRAYSRANLPSDAIRAFNKMLDYGITPCVDDLDQLLYTLCKRKHVKQAQEFFDQVK 197

Query: 304 AKGVEPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVE 483
              + P   +Y+I ++   E  D   A KL D M       D+  +N V+  LCK  KV+
Sbjct: 198 GGELIPTVKSYSILMKGWGEIGDSGEAQKLFDEMLEREYTVDLLAWNSVLDALCKGGKVD 257

Query: 484 EAYELLDEMLERGVNPDAWSYNTILTFHCDHCEV 585
           EAYEL   M  +G+ PDA+SY+  +   C   ++
Sbjct: 258 EAYELFQGMRTKGLEPDAYSYSIFIRASCSENDI 291



 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDV 222
           C    +  A +  D +K    +P+V +Y  +I+   +     EA +L DEMLERG   D 
Sbjct: 286 CSENDIHSAFRVLDSMKRCNLAPNVFTYNCIIKSLCKNNKIDEAYELLDEMLERGVKPDT 345

Query: 223 LAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDR 402
            +YN+ L   C     + A KL   M   G E D  TY + ++            K+   
Sbjct: 346 WSYNTVLAFHCDHNEVNTALKLILRMDKDGCERDRHTYNMVLKMLIRIGRFDRMEKVWYS 405

Query: 403 MKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
           M+     P V TY  +I  LCK   K+EEA    + M++ G+ P
Sbjct: 406 MEKKGFYPTVSTYAVMIHGLCKKRGKLEEASRYFEMMIDEGIPP 449


>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Citrus sinensis]
          Length = 531

 Score =  285 bits (729), Expect = 6e-75
 Identities = 132/189 (69%), Positives = 157/189 (83%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           D+DQLL+ LCKRKHV+ A QFFD VK E +P+VK+Y IL+RG G++G+ SEARKLFDEML
Sbjct: 193 DLDQLLHALCKRKHVKVAHQFFDNVKHEITPTVKTYSILVRGLGDVGELSEARKLFDEML 252

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ER C VD+LA+NS LEA+CK GN DEA+ + REM + G EPDA +Y+IFI A CEANDIH
Sbjct: 253 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 312

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
             F++LD MK YNLVP+V TYNC+IKKLCKNEKVEEAY+LLDEM+ERG NPD WSYN IL
Sbjct: 313 SVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 372

Query: 559 TFHCDHCEV 585
            +HCDH EV
Sbjct: 373 AYHCDHAEV 381



 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
 Frame = +1

Query: 25  DQLLYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE 201
           + LL  +CK  ++  A     +++     P   SY I I  + E  D     ++ D M  
Sbjct: 264 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 323

Query: 202 RGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHL 381
                +V  YN  ++ LCK    +EAY+L  EM  +G  PD  +Y   +   C+  ++++
Sbjct: 324 YNLVPNVFTYNCIIKKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDHAEVNM 383

Query: 382 AFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILT 561
           A +L+ RM   N++PD HTYN V+K L +  + + A E+ + M +RG  P   +Y+ ++ 
Sbjct: 384 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 443

Query: 562 FHC 570
             C
Sbjct: 444 GLC 446



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = +1

Query: 34  LYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGC 210
           ++  C+   +    +  D +K +   P+V +Y  +I+   +     EA +L DEM+ERG 
Sbjct: 302 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNEKVEEAYQLLDEMIERGA 361

Query: 211 SVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFK 390
           + D  +YN+ L   C     + A +L   M  + V PD  TY + ++          A +
Sbjct: 362 NPDEWSYNAILAYHCDHAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 421

Query: 391 LLDRMKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
           + + M+     P V TY+ ++  LCK + K+EEA +  + M++ G+ P
Sbjct: 422 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 469


>ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, partial [Citrus
           clementina] gi|557529229|gb|ESR40479.1| hypothetical
           protein CICLE_v100269871mg, partial [Citrus clementina]
          Length = 436

 Score =  281 bits (720), Expect = 7e-74
 Identities = 130/189 (68%), Positives = 156/189 (82%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           D+DQLL+ LCKRKHV+ A QFFD  K EF+P+VK+Y IL+RG G++G+ SEARKLFDEML
Sbjct: 98  DLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 157

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ER C VD+LA+NS LEA+CK GN DEA+ + REM + G EPDA +Y+IFI A CEANDIH
Sbjct: 158 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 217

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
             F++LD MK YNLVP+V TYNC+I+KLCKNEKVEEAY+LLDEM+ERG NPD WSYN IL
Sbjct: 218 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 277

Query: 559 TFHCDHCEV 585
            +HCD  EV
Sbjct: 278 AYHCDRAEV 286



 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
 Frame = +1

Query: 25  DQLLYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE 201
           + LL  +CK  ++  A     +++     P   SY I I  + E  D     ++ D M  
Sbjct: 169 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 228

Query: 202 RGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHL 381
                +V  YN  +  LCK    +EAY+L  EM  +G  PD  +Y   +   C+  ++++
Sbjct: 229 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 288

Query: 382 AFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILT 561
           A +L+ RM   N++PD HTYN V+K L +  + + A E+ + M +RG  P   +Y+ ++ 
Sbjct: 289 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 348

Query: 562 FHC 570
             C
Sbjct: 349 GLC 351



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = +1

Query: 34  LYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGC 210
           ++  C+   +    +  D +K +   P+V +Y  +IR   +     EA +L DEM+ERG 
Sbjct: 207 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 266

Query: 211 SVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFK 390
           + D  +YN+ L   C     + A +L   M  + V PD  TY + ++          A +
Sbjct: 267 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 326

Query: 391 LLDRMKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
           + + M+     P V TY+ ++  LCK + K+EEA +  + M++ G+ P
Sbjct: 327 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 374


>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Solanum tuberosum]
          Length = 550

 Score =  269 bits (687), Expect = 5e-70
 Identities = 122/189 (64%), Positives = 153/189 (80%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           D+D+LL  LCKRKH + AQ+FFDKVK +F PSVK+Y ILIRGWG++G+ +EA+KLFDEML
Sbjct: 210 DLDKLLLALCKRKHAKQAQEFFDKVKDDFMPSVKTYSILIRGWGDLGEVAEAQKLFDEML 269

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ERGCSVD+LAYNS L++LCK G  DEA+  F +M + G+ PDA +Y+IFI   C ANDIH
Sbjct: 270 ERGCSVDLLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCTANDIH 329

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
             F++LD+M+ Y LVP+V TYNC+IKKLCK +KV+EAY+L+DEM+  GV PD WSYNTIL
Sbjct: 330 SVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEMISEGVRPDCWSYNTIL 389

Query: 559 TFHCDHCEV 585
             HCDH EV
Sbjct: 390 ASHCDHNEV 398



 Score =  102 bits (255), Expect = 6e-20
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
 Frame = +1

Query: 25  DQLLYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE 201
           + +L  LCK   +  A  FF K++     P   SY I I G+    D     ++ D+M  
Sbjct: 281 NSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCTANDIHSVFRVLDQMRR 340

Query: 202 RGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHL 381
                +V  YN  ++ LCK    DEAY+L  EM ++GV PD  +Y   + + C+ N+++L
Sbjct: 341 YKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEMISEGVRPDCWSYNTILASHCDHNEVNL 400

Query: 382 AFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILT 561
           A +L+ RM+  N +PD HTYN ++K L +  + +   ++ + M +R   P   +Y+ ++ 
Sbjct: 401 AHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWESMEDRNFYPSVSTYSVMVH 460

Query: 562 FHC 570
             C
Sbjct: 461 GFC 463



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = +1

Query: 46  CKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDV 222
           C    +    +  D+++ ++  P+V +Y  +I+   +     EA +L DEM+  G   D 
Sbjct: 323 CTANDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEMISEGVRPDC 382

Query: 223 LAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDR 402
            +YN+ L + C     + A++L   M      PD  TY + ++            K+ + 
Sbjct: 383 WSYNTILASHCDHNEVNLAHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWES 442

Query: 403 MKGYNLVPDVHTYNCVIKKLC-KNEKVEEAYELLDEMLERGVNP 531
           M+  N  P V TY+ ++   C K  K+EEA +  + M++ G+ P
Sbjct: 443 MEDRNFYPSVSTYSVMVHGFCQKKGKLEEACKYFEMMIDEGIPP 486


>ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutrema salsugineum]
           gi|557089474|gb|ESQ30182.1| hypothetical protein
           EUTSA_v10011389mg [Eutrema salsugineum]
          Length = 523

 Score =  268 bits (685), Expect = 8e-70
 Identities = 120/190 (63%), Positives = 154/190 (81%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEM 195
           DD+DQLL+ LC RKHV HAQ FFD+ K   +PS K+Y IL+RGW  I D+S ARK+FDEM
Sbjct: 174 DDLDQLLHSLCDRKHVNHAQDFFDRAKAGIAPSAKTYSILVRGWARIRDASGARKVFDEM 233

Query: 196 LERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDI 375
           LE  C VD+LAYN+ L+ALCK G+ D AYK+F+EMG  G+EPDA +YAIFI A C+A+D+
Sbjct: 234 LETNCPVDLLAYNASLDALCKSGDVDGAYKMFQEMGNLGLEPDAYSYAIFIHAYCDADDV 293

Query: 376 HLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTI 555
           H A+K+LDRM+ Y LVP+V+TYN +IK LCK E+V++AY LLDEM++RG NPD W+YN+I
Sbjct: 294 HSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYLLLDEMIQRGANPDTWTYNSI 353

Query: 556 LTFHCDHCEV 585
           + +HCDHCEV
Sbjct: 354 MAYHCDHCEV 363



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 6/185 (3%)
 Frame = +1

Query: 22  VDQLLY-----VLCKRKHVRHAQQFFDKV-KFEFSPSVKSYGILIRGWGEIGDSSEARKL 183
           VD L Y      LCK   V  A + F ++      P   SY I I  + +  D   A K+
Sbjct: 240 VDLLAYNASLDALCKSGDVDGAYKMFQEMGNLGLEPDAYSYAIFIHAYCDADDVHSAYKV 299

Query: 184 FDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACE 363
            D M       +V  YN  ++ LCK    D+AY L  EM  +G  PD  TY   +   C+
Sbjct: 300 LDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYLLLDEMIQRGANPDTWTYNSIMAYHCD 359

Query: 364 ANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWS 543
             +++ A KL+ RM     +PD HTYN V+K L +  + +   E+ + M ER   P   +
Sbjct: 360 HCEVNRATKLISRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEMWEGMSEREFYPTVAT 419

Query: 544 YNTIL 558
           Y  ++
Sbjct: 420 YTVMI 424



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
 Frame = +1

Query: 34  LYVLCKRKHVRHAQQFFDKV-KFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGC 210
           ++  C    V  A +  D++ ++E  P+V +Y  +I+   +     +A  L DEM++RG 
Sbjct: 284 IHAYCDADDVHSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYLLLDEMIQRGA 343

Query: 211 SVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFK 390
           + D   YNS +   C     + A KL   M      PD  TY + ++            +
Sbjct: 344 NPDTWTYNSIMAYHCDHCEVNRATKLISRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTE 403

Query: 391 LLDRMKGYNLVPDVHTYNCVIKKLC-KNEKVEEAYELLDEMLERGVNP 531
           + + M      P V TY  +I  L  K  K+EEA    + M++ G+ P
Sbjct: 404 MWEGMSEREFYPTVATYTVMIHGLVRKKGKIEEACRYFEMMIDDGIPP 451


>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524756|gb|AET05210.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  265 bits (678), Expect = 5e-69
 Identities = 122/189 (64%), Positives = 152/189 (80%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           DVD LLY LCK+KHVR AQQFFD+VK  F  + K+Y ILI GWG+IGDS +AR+LFD ML
Sbjct: 181 DVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKARELFDAML 240

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           E+GC VD+LAYN+ LEALCKGG+ DEA     +M +K VEPDA TY+IFIR+ C+AN++H
Sbjct: 241 EQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVH 300

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
            AF +LD+M+  NL+P+V TYNC+IK+LCK +KVEEAY+LLDEM+  G+ PD WSYN I 
Sbjct: 301 SAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQ 360

Query: 559 TFHCDHCEV 585
            +HCDHCEV
Sbjct: 361 AYHCDHCEV 369



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
 Frame = +1

Query: 25  DQLLYVLCKRKHVRHAQQFF-DKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE 201
           + LL  LCK  HV  A  F  D +  +  P   +Y I IR + +  +   A  + D+M  
Sbjct: 252 NNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRR 311

Query: 202 RGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHL 381
                +V  YN  ++ LCK    +EAY+L  EM + G++PD  +Y       C+  +++ 
Sbjct: 312 CNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNR 371

Query: 382 AFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILT 561
           A KL+ RM+     PD HTYN V+K L +  + ++A E+ + M ++   P   +Y+ ++ 
Sbjct: 372 ALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIH 431

Query: 562 FHC 570
             C
Sbjct: 432 GLC 434


>ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297340234|gb|EFH70651.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 525

 Score =  265 bits (677), Expect = 7e-69
 Identities = 119/191 (62%), Positives = 157/191 (82%), Gaps = 1/191 (0%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDE 192
           DD+DQLL+ LC RKHV HAQ+FFDK K F   PS K+Y IL+RGW  I D+S ARK+FDE
Sbjct: 174 DDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDE 233

Query: 193 MLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEAND 372
           MLE  C VD+LAYN+ L+ALCK G+ D AYK+F+EMG  G++PDA ++AIFI + C+A+D
Sbjct: 234 MLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASD 293

Query: 373 IHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNT 552
           +H A+++LDRMK Y+LVP+V+T+N +IK LCKNEKV++AY LLDEM+++G NPD W+YN+
Sbjct: 294 VHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353

Query: 553 ILTFHCDHCEV 585
           I+ +HCDHCEV
Sbjct: 354 IMAYHCDHCEV 364



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
 Frame = +1

Query: 31  LLYVLCKRKHVRHAQQFFDKV-KFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERG 207
           LL  LCK   V  A + F ++      P   S+ I I  + +  D   A ++ D M    
Sbjct: 249 LLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYD 308

Query: 208 CSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAF 387
              +V  +N  ++ LCK    D+AY L  EM  KG  PD  TY   +   C+  +++ A 
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRAT 368

Query: 388 KLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
           KLL RM     +PD HTYN V+K L +  + +   E+ + M ER   P   +Y  ++
Sbjct: 369 KLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMI 425



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
 Frame = +1

Query: 34  LYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGC 210
           ++  C    V  A Q  D++K ++  P+V ++  +I+   +     +A  L DEM+++G 
Sbjct: 285 IHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA 344

Query: 211 SVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFK 390
           + D   YNS +   C     + A KL   M      PD  TY + ++            +
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTE 404

Query: 391 LLDRMKGYNLVPDVHTYNCVIKKLC-KNEKVEEAYELLDEMLERGVNP 531
           + + M      P V TY  +I  L  K  K+EEA    + M++ G+ P
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452


>ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 524

 Score =  265 bits (676), Expect = 9e-69
 Identities = 121/190 (63%), Positives = 153/190 (80%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEM 195
           +D D LLY+LCKRKHV+ AQQFFD+ K  F  + K+Y ILI GWG+I DS +AR++F+EM
Sbjct: 184 NDFDMLLYILCKRKHVKQAQQFFDQAKNRFLLTAKTYSILICGWGKIADSGKAREVFEEM 243

Query: 196 LERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDI 375
           +E+GC VD+LAYN+ LE+LCKGGN DEA  LF +M +K VE DA TY+IFIR+ C AND+
Sbjct: 244 VEQGCPVDLLAYNNLLESLCKGGNVDEAMNLFHDMLSKRVEVDAFTYSIFIRSHCVANDM 303

Query: 376 HLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTI 555
           H AF++LD+MK  NL+P+V TYNC+IK+LCKN+ VEEAYELLDEM+  G+ PD WSYN I
Sbjct: 304 HSAFRVLDQMKRCNLLPNVFTYNCIIKRLCKNKMVEEAYELLDEMISSGLKPDTWSYNAI 363

Query: 556 LTFHCDHCEV 585
             +HCDHCEV
Sbjct: 364 QAYHCDHCEV 373



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKH-----VRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARK 180
           +VD   Y +  R H     +  A +  D++K     P+V +Y  +I+   +     EA +
Sbjct: 284 EVDAFTYSIFIRSHCVANDMHSAFRVLDQMKRCNLLPNVFTYNCIIKRLCKNKMVEEAYE 343

Query: 181 LFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAAC 360
           L DEM+  G   D  +YN+     C     + A +L   M      PD  TY + ++   
Sbjct: 344 LLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDDCLPDRHTYNLVLKLLI 403

Query: 361 EANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNE-KVEEAYELLDEMLERGVNP 531
                    ++ + M      P V TY+ +I   CK + K+EEA    + M++ G+ P
Sbjct: 404 RIGRFDKVTEVWENMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACRYFEIMVDEGIPP 461


>ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Solanum lycopersicum]
          Length = 550

 Score =  264 bits (675), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +1

Query: 19  DVDQLLYVLCKRKHVRHAQQFFDKVKFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEML 198
           D+D+LL  LCKRKH + AQ+FFDKVK +F PSVK+Y ILIRGWG++G+ +EA+KLFDEML
Sbjct: 210 DLDKLLLALCKRKHAKQAQEFFDKVKDDFMPSVKTYSILIRGWGDLGEVAEAQKLFDEML 269

Query: 199 ERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIH 378
           ERGCSVD+LAYNS L++LCK G  DEA+  F +M + G+ PDA +Y+IFI   C  NDIH
Sbjct: 270 ERGCSVDLLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCAGNDIH 329

Query: 379 LAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
             F++LD+M+ Y LVP+V TYNC+IKKLCK +KV+EAY+L+DEM+  GV PD WSYNTIL
Sbjct: 330 SVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEMINEGVRPDCWSYNTIL 389

Query: 559 TFHCDHCEV 585
             HCD  EV
Sbjct: 390 ASHCDQNEV 398



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
 Frame = +1

Query: 25  DQLLYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLE 201
           + +L  LCK   +  A  FF K++     P   SY I I G+    D     ++ D+M  
Sbjct: 281 NSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIHGYCAGNDIHSVFRVLDQMRR 340

Query: 202 RGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHL 381
                +V  YN  ++ LCK    DEAY+L  EM  +GV PD  +Y   + + C+ N+++L
Sbjct: 341 YKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEMINEGVRPDCWSYNTILASHCDQNEVNL 400

Query: 382 AFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTILT 561
           A +L+ RM+  N +PD HTYN ++K L +  + +   ++   M  R   P   +Y  ++ 
Sbjct: 401 AHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVWKSMEGRNFYPSVSTYAVMVH 460

Query: 562 FHC 570
             C
Sbjct: 461 GFC 463


>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g52640, mitochondrial; Flags: Precursor
           gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
           DUF domains [Arabidopsis thaliana]
           gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
           thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194712|gb|AEE32833.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  264 bits (674), Expect = 2e-68
 Identities = 119/191 (62%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
 Frame = +1

Query: 16  DDVDQLLYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDE 192
           DD+DQLL+ LC +KHV HAQ+FF K K F   PS K+Y IL+RGW  I D+S ARK+FDE
Sbjct: 174 DDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDE 233

Query: 193 MLERGCSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEAND 372
           MLER C VD+LAYN+ L+ALCK G+ D  YK+F+EMG  G++PDA ++AIFI A C+A D
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD 293

Query: 373 IHLAFKLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNT 552
           +H A+K+LDRMK Y+LVP+V+T+N +IK LCKNEKV++AY LLDEM+++G NPD W+YN+
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353

Query: 553 ILTFHCDHCEV 585
           I+ +HCDHCEV
Sbjct: 354 IMAYHCDHCEV 364



 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
 Frame = +1

Query: 31  LLYVLCKRKHVRHAQQFFDKV-KFEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERG 207
           LL  LCK   V    + F ++      P   S+ I I  + + GD   A K+ D M    
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308

Query: 208 CSVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAF 387
              +V  +N  ++ LCK    D+AY L  EM  KG  PD  TY   +   C+  +++ A 
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRAT 368

Query: 388 KLLDRMKGYNLVPDVHTYNCVIKKLCKNEKVEEAYELLDEMLERGVNPDAWSYNTIL 558
           KLL RM     +PD HTYN V+K L +  + + A E+ + M ER   P   +Y  ++
Sbjct: 369 KLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 50/161 (31%), Positives = 79/161 (49%)
 Frame = +1

Query: 103 FSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGCSVDVLAYNSFLEALCKGGNGDEAY 282
           F  S K + I+ R +      SEA + F+ M+E G    V   +  L +LC   + + A 
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193

Query: 283 KLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFKLLDRMKGYNLVPDVHTYNCVIKKL 462
           + F +    G+ P A TY+I +R      D   A K+ D M   N V D+  YN ++  L
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253

Query: 463 CKNEKVEEAYELLDEMLERGVNPDAWSYNTILTFHCDHCEV 585
           CK+  V+  Y++  EM   G+ PDA+S+   +  +CD  +V
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDV 294



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
 Frame = +1

Query: 34  LYVLCKRKHVRHAQQFFDKVK-FEFSPSVKSYGILIRGWGEIGDSSEARKLFDEMLERGC 210
           ++  C    V  A +  D++K ++  P+V ++  +I+   +     +A  L DEM+++G 
Sbjct: 285 IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA 344

Query: 211 SVDVLAYNSFLEALCKGGNGDEAYKLFREMGAKGVEPDAGTYAIFIRAACEANDIHLAFK 390
           + D   YNS +   C     + A KL   M      PD  TY + ++          A +
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE 404

Query: 391 LLDRMKGYNLVPDVHTYNCVIKKLC-KNEKVEEAYELLDEMLERGVNP 531
           + + M      P V TY  +I  L  K  K+EEA    + M++ G+ P
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452


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